RNA–Protein interactions for RNA: ENST00000522880.1

SFTPC-208, Transcript of surfactant protein C, humanhuman

TSL 3

Gene SFTPC, Length 1,000 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-208ENST00000522880 SCAF11Q99590 1463 aaKnown RBP21.63■■□□□ 1.05
SFTPC-208ENST00000522880 ZNF326Q5BKZ1 582 aaKnown RBP21.62■■□□□ 1.05
SFTPC-208ENST00000522880 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.62■■□□□ 1.05
SFTPC-208ENST00000522880 RIMS2Q9UQ26 1411 aa21.61■■□□□ 1.05
SFTPC-208ENST00000522880 ZFYVE9O95405 1425 aa21.6■■□□□ 1.05
SFTPC-208ENST00000522880 MED14O60244 1454 aa21.59■■□□□ 1.05
SFTPC-208ENST00000522880 LTKP29376 864 aa21.59■■□□□ 1.05
SFTPC-208ENST00000522880 NEURL4Q96JN8 1562 aa21.59■■□□□ 1.05
SFTPC-208ENST00000522880 KIF1BO60333 1816 aa21.59■■□□□ 1.05
SFTPC-208ENST00000522880 RPGRIP1LQ68CZ1 1315 aa21.58■■□□□ 1.05
SFTPC-208ENST00000522880 PPP1R15AO75807 674 aaPredicted RBP21.58■■□□□ 1.05
SFTPC-208ENST00000522880 NPHP4O75161 1426 aaPredicted RBP21.57■■□□□ 1.04
SFTPC-208ENST00000522880 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
SFTPC-208ENST00000522880 LTBP4Q8N2S1 1624 aa21.57■■□□□ 1.04
SFTPC-208ENST00000522880 POLR1AO95602 1720 aaPredicted RBP21.57■■□□□ 1.04
SFTPC-208ENST00000522880 MYO5BQ9ULV0 1848 aa21.55■■□□□ 1.04
SFTPC-208ENST00000522880 PLEKHG1Q9ULL1 1385 aa21.53■■□□□ 1.04
SFTPC-208ENST00000522880 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
SFTPC-208ENST00000522880 NEXMIFQ5QGS0 1516 aa21.52■■□□□ 1.04
SFTPC-208ENST00000522880 VGFO15240 615 aaPredicted RBP21.51■■□□□ 1.03
SFTPC-208ENST00000522880 NUTM2DQ5VT03 806 aaPredicted RBP21.5■■□□□ 1.03
SFTPC-208ENST00000522880 IQGAP1P46940 1657 aa21.5■■□□□ 1.03
SFTPC-208ENST00000522880 BCANQ96GW7 911 aa21.49■■□□□ 1.03
SFTPC-208ENST00000522880 IQSEC2Q5JU85 1478 aa21.46■■□□□ 1.03
SFTPC-208ENST00000522880 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
SFTPC-208ENST00000522880 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
SFTPC-208ENST00000522880 SLC26A8Q96RN1 970 aa21.43■■□□□ 1.02
SFTPC-208ENST00000522880 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
SFTPC-208ENST00000522880 PPLO60437 1756 aa21.42■■□□□ 1.02
SFTPC-208ENST00000522880 TBX22Q9Y458 520 aa21.42■■□□□ 1.02
SFTPC-208ENST00000522880 SETBP1Q9Y6X0 1596 aa21.42■■□□□ 1.02
SFTPC-208ENST00000522880 MYOM2P54296 1465 aa21.41■■□□□ 1.02
SFTPC-208ENST00000522880 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
SFTPC-208ENST00000522880 DIP2AQ14689 1571 aa21.4■■□□□ 1.02
SFTPC-208ENST00000522880 ADAMTS13Q76LX8 1427 aa21.4■■□□□ 1.02
SFTPC-208ENST00000522880 ADGRF5Q8IZF2 1346 aa21.39■■□□□ 1.01
SFTPC-208ENST00000522880 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
SFTPC-208ENST00000522880 SENP3Q9H4L4 574 aaPredicted RBP21.39■■□□□ 1.01
SFTPC-208ENST00000522880 IFT172Q9UG01 1749 aa21.38■■□□□ 1.01
SFTPC-208ENST00000522880 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
SFTPC-208ENST00000522880 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
SFTPC-208ENST00000522880 PIK3R4Q99570 1358 aa21.37■■□□□ 1.01
SFTPC-208ENST00000522880 UBAP1LF5GYI3 381 aa21.36■■□□□ 1.01
SFTPC-208ENST00000522880 NRXN1Q9ULB1 1477 aa21.36■■□□□ 1.01
SFTPC-208ENST00000522880 PIK3C2GO75747 1445 aa21.36■■□□□ 1.01
SFTPC-208ENST00000522880 KDM2AQ9Y2K7 1162 aa21.35■■□□□ 1.01
SFTPC-208ENST00000522880 NRXN3Q9Y4C0 1643 aa21.34■■□□□ 1.01
SFTPC-208ENST00000522880 KCNA6P17658 529 aa21.33■■□□□ 1.01
SFTPC-208ENST00000522880 L3MBTL2Q969R5 705 aa21.33■■□□□ 1.01
SFTPC-208ENST00000522880 TONSLQ96HA7 1378 aa21.33■■□□□ 1
SFTPC-208ENST00000522880 CPS1P31327 1500 aa21.32■■□□□ 1
SFTPC-208ENST00000522880 ALKQ9UM73 1620 aa21.31■■□□□ 1
SFTPC-208ENST00000522880 METP08581 1390 aa21.29■■□□□ 1
SFTPC-208ENST00000522880 C14orf93Q9H972 538 aaKnown RBP21.29■■□□□ 1
SFTPC-208ENST00000522880 NWD1Q149M9 1564 aa21.27■■□□□ 1
SFTPC-208ENST00000522880 NKTRP30414 1462 aaKnown RBP21.26■□□□□ 0.99
SFTPC-208ENST00000522880 TIMELESSQ9UNS1 1208 aa21.26■□□□□ 0.99
SFTPC-208ENST00000522880 AMOTL2Q9Y2J4 779 aa21.26■□□□□ 0.99
SFTPC-208ENST00000522880 LAMC1P11047 1609 aa21.26■□□□□ 0.99
SFTPC-208ENST00000522880 MED1Q15648 1581 aaPredicted RBP21.25■□□□□ 0.99
SFTPC-208ENST00000522880 CFAP70Q5T0N1 1121 aa21.25■□□□□ 0.99
SFTPC-208ENST00000522880 PRAG1Q86YV5 1406 aa21.25■□□□□ 0.99
SFTPC-208ENST00000522880 PTPRUQ92729 1446 aa21.24■□□□□ 0.99
SFTPC-208ENST00000522880 SETD1AO15047 1707 aaKnown RBP21.24■□□□□ 0.99
SFTPC-208ENST00000522880 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
SFTPC-208ENST00000522880 CHD2O14647 1828 aaKnown RBP21.22■□□□□ 0.99
SFTPC-208ENST00000522880 LRRC7Q96NW7 1537 aa21.21■□□□□ 0.99
SFTPC-208ENST00000522880 PROSER2Q86WR7 435 aaPredicted RBP21.2■□□□□ 0.98
SFTPC-208ENST00000522880 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
SFTPC-208ENST00000522880 STRCP1A6NGW2 1772 aa21.2■□□□□ 0.98
SFTPC-208ENST00000522880 TMEM132EQ6IEE7 984 aa21.19■□□□□ 0.98
SFTPC-208ENST00000522880 ASXL1Q8IXJ9 1541 aa21.19■□□□□ 0.98
SFTPC-208ENST00000522880 XRN1Q8IZH2 1706 aaKnown RBP21.18■□□□□ 0.98
SFTPC-208ENST00000522880 HSPA1LP34931 641 aa21.18■□□□□ 0.98
SFTPC-208ENST00000522880 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
SFTPC-208ENST00000522880 TMEM94Q12767 1356 aa21.18■□□□□ 0.98
SFTPC-208ENST00000522880 ABCC11Q96J66 1382 aa21.18■□□□□ 0.98
SFTPC-208ENST00000522880 PTCH1Q13635 1447 aa21.18■□□□□ 0.98
SFTPC-208ENST00000522880 YTHDC2Q9H6S0 1430 aaKnown RBP21.18■□□□□ 0.98
SFTPC-208ENST00000522880 NCOA3Q9Y6Q9 1424 aa21.18■□□□□ 0.98
SFTPC-208ENST00000522880 TECPR2O15040 1411 aa21.17■□□□□ 0.98
SFTPC-208ENST00000522880 ADGRB1O14514 1584 aa21.16■□□□□ 0.98
SFTPC-208ENST00000522880 STK26Q9P289 416 aa21.16■□□□□ 0.98
SFTPC-208ENST00000522880 KIAA1210Q9ULL0 1709 aa21.15■□□□□ 0.98
SFTPC-208ENST00000522880 SIRT1Q96EB6 747 aa21.13■□□□□ 0.97
SFTPC-208ENST00000522880 ROBO2Q9HCK4 1378 aa21.12■□□□□ 0.97
SFTPC-208ENST00000522880 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
SFTPC-208ENST00000522880 C14orf37Q86TY3 774 aa21.11■□□□□ 0.97
SFTPC-208ENST00000522880 FAM135BQ49AJ0 1406 aa21.11■□□□□ 0.97
SFTPC-208ENST00000522880 ROCK2O75116 1388 aaKnown RBP21.1■□□□□ 0.97
SFTPC-208ENST00000522880 NBPF1Q3BBV0 1214 aa21.1■□□□□ 0.97
SFTPC-208ENST00000522880 RBM33Q96EV2 1170 aaKnown RBP21.1■□□□□ 0.97
SFTPC-208ENST00000522880 MSH6P52701 1360 aa21.1■□□□□ 0.97
SFTPC-208ENST00000522880 KNDC1Q76NI1 1749 aa21.09■□□□□ 0.97
SFTPC-208ENST00000522880 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
SFTPC-208ENST00000522880 TRAK1Q9UPV9 953 aa21.08■□□□□ 0.97
SFTPC-208ENST00000522880 TRPM1Q7Z4N2 1603 aa21.07■□□□□ 0.96
SFTPC-208ENST00000522880 RALGAPBQ86X10 1494 aa21.07■□□□□ 0.96
SFTPC-208ENST00000522880 C19orf44Q9H6X5 657 aa21.07■□□□□ 0.96
SFTPC-208ENST00000522880 TOM1O60784 492 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms