RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 MYO5BQ9ULV0 1848 aa32.47■■■□□ 2.79
HOXA3-206ENST00000522788 KCNA6P17658 529 aa32.45■■■□□ 2.79
HOXA3-206ENST00000522788 TRIM52Q96A61 297 aa32.45■■■□□ 2.79
HOXA3-206ENST00000522788 ALKQ9UM73 1620 aa32.44■■■□□ 2.78
HOXA3-206ENST00000522788 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.44■■■□□ 2.78
HOXA3-206ENST00000522788 PPP1R15AO75807 674 aaPredicted RBP32.43■■■□□ 2.78
HOXA3-206ENST00000522788 SENP3Q9H4L4 574 aaPredicted RBP32.43■■■□□ 2.78
HOXA3-206ENST00000522788 NUTM2DQ5VT03 806 aaPredicted RBP32.42■■■□□ 2.78
HOXA3-206ENST00000522788 BCANQ96GW7 911 aa32.42■■■□□ 2.78
HOXA3-206ENST00000522788 PIP4K2BP78356 416 aa32.41■■■□□ 2.78
HOXA3-206ENST00000522788 SPHKAPQ2M3C7 1700 aa32.4■■■□□ 2.78
HOXA3-206ENST00000522788 TBX22Q9Y458 520 aa32.37■■■□□ 2.77
HOXA3-206ENST00000522788 TRPM2O94759 1503 aa32.36■■■□□ 2.77
HOXA3-206ENST00000522788 SLC4A1APQ9BWU0 796 aaKnown RBP32.36■■■□□ 2.77
HOXA3-206ENST00000522788 ADAMTS13Q76LX8 1427 aa32.35■■■□□ 2.77
HOXA3-206ENST00000522788 SCAF1Q9H7N4 1312 aaKnown RBP32.35■■■□□ 2.77
HOXA3-206ENST00000522788 TMEM94Q12767 1356 aa32.33■■■□□ 2.77
HOXA3-206ENST00000522788 NWD1Q149M9 1564 aa32.33■■■□□ 2.77
HOXA3-206ENST00000522788 CLTCL1P53675 1640 aa32.32■■■□□ 2.76
HOXA3-206ENST00000522788 HSPA1LP34931 641 aa32.31■■■□□ 2.76
HOXA3-206ENST00000522788 PROSER2Q86WR7 435 aaPredicted RBP32.3■■■□□ 2.76
HOXA3-206ENST00000522788 RBM33Q96EV2 1170 aaKnown RBP32.29■■■□□ 2.76
HOXA3-206ENST00000522788 NKTRP30414 1462 aaKnown RBP32.29■■■□□ 2.76
HOXA3-206ENST00000522788 XIRP1Q702N8 1843 aaKnown RBP32.28■■■□□ 2.76
HOXA3-206ENST00000522788 ZNF326Q5BKZ1 582 aaKnown RBP32.27■■■□□ 2.76
HOXA3-206ENST00000522788 FOXD1Q16676 465 aa32.24■■■□□ 2.75
HOXA3-206ENST00000522788 DIP2AQ14689 1571 aa32.23■■■□□ 2.75
HOXA3-206ENST00000522788 PIK3R4Q99570 1358 aa32.22■■■□□ 2.75
HOXA3-206ENST00000522788 MPHOSPH9Q99550 1183 aa32.22■■■□□ 2.75
HOXA3-206ENST00000522788 CHD2O14647 1828 aaKnown RBP32.2■■■□□ 2.75
HOXA3-206ENST00000522788 NEXMIFQ5QGS0 1516 aa32.2■■■□□ 2.74
HOXA3-206ENST00000522788 SETD5Q9C0A6 1442 aa32.19■■■□□ 2.74
HOXA3-206ENST00000522788 PTPRUQ92729 1446 aa32.17■■■□□ 2.74
HOXA3-206ENST00000522788 SETBP1Q9Y6X0 1596 aa32.17■■■□□ 2.74
HOXA3-206ENST00000522788 NRXN3Q9Y4C0 1643 aa32.17■■■□□ 2.74
HOXA3-206ENST00000522788 DISP3Q9P2K9 1392 aa32.16■■■□□ 2.74
HOXA3-206ENST00000522788 AMOTL2Q9Y2J4 779 aa32.13■■■□□ 2.73
HOXA3-206ENST00000522788 FAM135BQ49AJ0 1406 aa32.11■■■□□ 2.73
HOXA3-206ENST00000522788 NCOA3Q9Y6Q9 1424 aa32.11■■■□□ 2.73
HOXA3-206ENST00000522788 MSH6P52701 1360 aa32.11■■■□□ 2.73
HOXA3-206ENST00000522788 KIF1BO60333 1816 aa32.11■■■□□ 2.73
HOXA3-206ENST00000522788 METP08581 1390 aa32.1■■■□□ 2.73
HOXA3-206ENST00000522788 ACIN1Q9UKV3 1341 aaKnown RBP32.1■■■□□ 2.73
HOXA3-206ENST00000522788 RPGRIP1LQ68CZ1 1315 aa32.09■■■□□ 2.73
HOXA3-206ENST00000522788 RAB3GAP2Q9H2M9 1393 aa32.08■■■□□ 2.73
HOXA3-206ENST00000522788 VGFO15240 615 aaPredicted RBP32.06■■■□□ 2.72
HOXA3-206ENST00000522788 CCDC144AA2RUR9 1427 aa32.05■■■□□ 2.72
HOXA3-206ENST00000522788 SPATA31E1Q6ZUB1 1445 aa32.02■■■□□ 2.72
HOXA3-206ENST00000522788 SLAIN2Q9P270 581 aa32.01■■■□□ 2.71
HOXA3-206ENST00000522788 XRN1Q8IZH2 1706 aaKnown RBP32■■■□□ 2.71
HOXA3-206ENST00000522788 C19orf44Q9H6X5 657 aa31.99■■■□□ 2.71
HOXA3-206ENST00000522788 ILDR2Q71H61 639 aa31.98■■■□□ 2.71
HOXA3-206ENST00000522788 C14orf37Q86TY3 774 aa31.98■■■□□ 2.71
HOXA3-206ENST00000522788 RGL3Q3MIN7 710 aa31.96■■■□□ 2.71
HOXA3-206ENST00000522788 ROBO1Q9Y6N7 1651 aa31.94■■■□□ 2.7
HOXA3-206ENST00000522788 CADPS2Q86UW7 1296 aa31.93■■■□□ 2.7
HOXA3-206ENST00000522788 ADGRF5Q8IZF2 1346 aa31.93■■■□□ 2.7
HOXA3-206ENST00000522788 PPLO60437 1756 aa31.92■■■□□ 2.7
HOXA3-206ENST00000522788 MED1Q15648 1581 aaPredicted RBP31.92■■■□□ 2.7
HOXA3-206ENST00000522788 HRCP23327 699 aa31.91■■■□□ 2.7
HOXA3-206ENST00000522788 SETD1AO15047 1707 aaKnown RBP31.9■■■□□ 2.7
HOXA3-206ENST00000522788 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.9■■■□□ 2.7
HOXA3-206ENST00000522788 ATF3P18847 181 aa31.9■■■□□ 2.7
HOXA3-206ENST00000522788 ANKRD30BQ9BXX2 1392 aa31.87■■■□□ 2.69
HOXA3-206ENST00000522788 DCCP43146 1447 aa31.85■■■□□ 2.69
HOXA3-206ENST00000522788 PRAG1Q86YV5 1406 aa31.84■■■□□ 2.69
HOXA3-206ENST00000522788 ROBO2Q9HCK4 1378 aa31.84■■■□□ 2.69
HOXA3-206ENST00000522788 PTCH1Q13635 1447 aa31.83■■■□□ 2.69
HOXA3-206ENST00000522788 ADGRL3Q9HAR2 1447 aa31.82■■■□□ 2.68
HOXA3-206ENST00000522788 IFT172Q9UG01 1749 aa31.79■■■□□ 2.68
HOXA3-206ENST00000522788 PIK3C2GO75747 1445 aa31.78■■■□□ 2.68
HOXA3-206ENST00000522788 MST1RQ04912 1400 aa31.77■■■□□ 2.68
HOXA3-206ENST00000522788 BRINP3Q76B58 766 aa31.77■■■□□ 2.68
HOXA3-206ENST00000522788 NRXN1Q9ULB1 1477 aa31.72■■■□□ 2.67
HOXA3-206ENST00000522788 ASXL1Q8IXJ9 1541 aa31.71■■■□□ 2.67
HOXA3-206ENST00000522788 TMEM132EQ6IEE7 984 aa31.71■■■□□ 2.67
HOXA3-206ENST00000522788 PHLPP1O60346 1717 aa31.71■■■□□ 2.67
HOXA3-206ENST00000522788 NALCNQ8IZF0 1738 aa31.71■■■□□ 2.67
HOXA3-206ENST00000522788 LRPPRCP42704 1394 aaKnown RBP31.7■■■□□ 2.67
HOXA3-206ENST00000522788 C14orf93Q9H972 538 aaKnown RBP31.7■■■□□ 2.67
HOXA3-206ENST00000522788 COL16A1Q07092 1604 aaPredicted RBP31.7■■■□□ 2.66
HOXA3-206ENST00000522788 AHDC1Q5TGY3 1603 aaPredicted RBP31.7■■■□□ 2.66
HOXA3-206ENST00000522788 MYOM2P54296 1465 aa31.7■■■□□ 2.66
HOXA3-206ENST00000522788 PHF23Q9BUL5 403 aaPredicted RBP31.69■■■□□ 2.66
HOXA3-206ENST00000522788 JCADQ9P266 1359 aa31.68■■■□□ 2.66
HOXA3-206ENST00000522788 TECPR2O15040 1411 aa31.68■■■□□ 2.66
HOXA3-206ENST00000522788 STK26Q9P289 416 aa31.67■■■□□ 2.66
HOXA3-206ENST00000522788 ABCC11Q96J66 1382 aa31.67■■■□□ 2.66
HOXA3-206ENST00000522788 CFAP70Q5T0N1 1121 aa31.65■■■□□ 2.66
HOXA3-206ENST00000522788 SOCS7O14512 581 aa31.64■■■□□ 2.66
HOXA3-206ENST00000522788 RGS17Q9UGC6 210 aaPredicted RBP31.64■■■□□ 2.66
HOXA3-206ENST00000522788 C1orf167Q5SNV9 1468 aa31.64■■■□□ 2.66
HOXA3-206ENST00000522788 WAPLQ7Z5K2 1190 aa31.63■■■□□ 2.65
HOXA3-206ENST00000522788 YTHDC2Q9H6S0 1430 aaKnown RBP31.62■■■□□ 2.65
HOXA3-206ENST00000522788 PLEKHH1Q9ULM0 1364 aa31.6■■■□□ 2.65
HOXA3-206ENST00000522788 DDX17Q92841 729 aaKnown RBP31.58■■■□□ 2.65
HOXA3-206ENST00000522788 SIRT1Q96EB6 747 aa31.57■■■□□ 2.64
HOXA3-206ENST00000522788 ORAI2Q96SN7 254 aa31.56■■■□□ 2.64
HOXA3-206ENST00000522788 DHX57Q6P158 1386 aaKnown RBP31.56■■■□□ 2.64
HOXA3-206ENST00000522788 DCAF11Q8TEB1 546 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms