RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 MPHOSPH9Q99550 1183 aa30.76■■■□□ 2.51
TRIM35-203ENST00000521253 ACIN1Q9UKV3 1341 aaKnown RBP30.75■■■□□ 2.51
TRIM35-203ENST00000521253 CPS1P31327 1500 aa30.75■■■□□ 2.51
TRIM35-203ENST00000521253 FOXD1Q16676 465 aa30.75■■■□□ 2.51
TRIM35-203ENST00000521253 CLTCL1P53675 1640 aa30.74■■■□□ 2.51
TRIM35-203ENST00000521253 PPP1R15AO75807 674 aaPredicted RBP30.74■■■□□ 2.51
TRIM35-203ENST00000521253 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.73■■■□□ 2.51
TRIM35-203ENST00000521253 NUTM2DQ5VT03 806 aaPredicted RBP30.72■■■□□ 2.51
TRIM35-203ENST00000521253 SLC26A8Q96RN1 970 aa30.72■■■□□ 2.51
TRIM35-203ENST00000521253 PLEKHG1Q9ULL1 1385 aa30.71■■■□□ 2.51
TRIM35-203ENST00000521253 SENP3Q9H4L4 574 aaPredicted RBP30.71■■■□□ 2.51
TRIM35-203ENST00000521253 BCANQ96GW7 911 aa30.7■■■□□ 2.51
TRIM35-203ENST00000521253 ZNF326Q5BKZ1 582 aaKnown RBP30.67■■■□□ 2.5
TRIM35-203ENST00000521253 STRCP1A6NGW2 1772 aa30.66■■■□□ 2.5
TRIM35-203ENST00000521253 HRCP23327 699 aa30.6■■■□□ 2.49
TRIM35-203ENST00000521253 LRRC7Q96NW7 1537 aa30.6■■■□□ 2.49
TRIM35-203ENST00000521253 KCNA6P17658 529 aa30.59■■■□□ 2.49
TRIM35-203ENST00000521253 CCDC144AA2RUR9 1427 aa30.58■■■□□ 2.49
TRIM35-203ENST00000521253 ADAMTS13Q76LX8 1427 aa30.58■■■□□ 2.49
TRIM35-203ENST00000521253 UBAP1LF5GYI3 381 aa30.58■■■□□ 2.49
TRIM35-203ENST00000521253 TBX22Q9Y458 520 aa30.58■■■□□ 2.49
TRIM35-203ENST00000521253 KIF1BO60333 1816 aa30.58■■■□□ 2.49
TRIM35-203ENST00000521253 NEXMIFQ5QGS0 1516 aa30.56■■■□□ 2.48
TRIM35-203ENST00000521253 DIP2AQ14689 1571 aa30.5■■■□□ 2.47
TRIM35-203ENST00000521253 NWD1Q149M9 1564 aa30.5■■■□□ 2.47
TRIM35-203ENST00000521253 RPGRIP1LQ68CZ1 1315 aa30.49■■■□□ 2.47
TRIM35-203ENST00000521253 SETBP1Q9Y6X0 1596 aa30.48■■■□□ 2.47
TRIM35-203ENST00000521253 SPATA31E1Q6ZUB1 1445 aa30.47■■■□□ 2.47
TRIM35-203ENST00000521253 NKTRP30414 1462 aaKnown RBP30.47■■■□□ 2.47
TRIM35-203ENST00000521253 NRXN3Q9Y4C0 1643 aa30.47■■■□□ 2.47
TRIM35-203ENST00000521253 TMEM94Q12767 1356 aa30.46■■■□□ 2.47
TRIM35-203ENST00000521253 TOM1O60784 492 aa30.46■■■□□ 2.47
TRIM35-203ENST00000521253 PIK3R4Q99570 1358 aa30.45■■■□□ 2.47
TRIM35-203ENST00000521253 VGFO15240 615 aaPredicted RBP30.45■■■□□ 2.47
TRIM35-203ENST00000521253 PROSER2Q86WR7 435 aaPredicted RBP30.45■■■□□ 2.47
TRIM35-203ENST00000521253 RGL3Q3MIN7 710 aa30.44■■■□□ 2.46
TRIM35-203ENST00000521253 RBM33Q96EV2 1170 aaKnown RBP30.43■■■□□ 2.46
TRIM35-203ENST00000521253 CHD2O14647 1828 aaKnown RBP30.42■■■□□ 2.46
TRIM35-203ENST00000521253 ANKRD30BQ9BXX2 1392 aa30.41■■■□□ 2.46
TRIM35-203ENST00000521253 ALKQ9UM73 1620 aa30.4■■■□□ 2.46
TRIM35-203ENST00000521253 PTPRUQ92729 1446 aa30.39■■■□□ 2.46
TRIM35-203ENST00000521253 XIRP1Q702N8 1843 aaKnown RBP30.39■■■□□ 2.46
TRIM35-203ENST00000521253 PIP4K2BP78356 416 aa30.39■■■□□ 2.46
TRIM35-203ENST00000521253 METP08581 1390 aa30.39■■■□□ 2.45
TRIM35-203ENST00000521253 PPLO60437 1756 aa30.37■■■□□ 2.45
TRIM35-203ENST00000521253 AMOTL2Q9Y2J4 779 aa30.37■■■□□ 2.45
TRIM35-203ENST00000521253 SCAF1Q9H7N4 1312 aaKnown RBP30.37■■■□□ 2.45
TRIM35-203ENST00000521253 ADGRF5Q8IZF2 1346 aa30.33■■■□□ 2.45
TRIM35-203ENST00000521253 MSH6P52701 1360 aa30.28■■■□□ 2.44
TRIM35-203ENST00000521253 XRN1Q8IZH2 1706 aaKnown RBP30.27■■■□□ 2.44
TRIM35-203ENST00000521253 NCOA3Q9Y6Q9 1424 aa30.27■■■□□ 2.44
TRIM35-203ENST00000521253 IFT172Q9UG01 1749 aa30.27■■■□□ 2.44
TRIM35-203ENST00000521253 SETD1AO15047 1707 aaKnown RBP30.25■■■□□ 2.43
TRIM35-203ENST00000521253 TRIM26Q12899 539 aaPredicted RBP30.24■■■□□ 2.43
TRIM35-203ENST00000521253 C14orf37Q86TY3 774 aa30.24■■■□□ 2.43
TRIM35-203ENST00000521253 PIK3C2GO75747 1445 aa30.22■■■□□ 2.43
TRIM35-203ENST00000521253 HSPA1LP34931 641 aa30.21■■■□□ 2.43
TRIM35-203ENST00000521253 MYOM2P54296 1465 aa30.19■■■□□ 2.42
TRIM35-203ENST00000521253 C19orf44Q9H6X5 657 aa30.18■■■□□ 2.42
TRIM35-203ENST00000521253 NRXN1Q9ULB1 1477 aa30.18■■■□□ 2.42
TRIM35-203ENST00000521253 PTCH1Q13635 1447 aa30.15■■■□□ 2.42
TRIM35-203ENST00000521253 FAM135BQ49AJ0 1406 aa30.15■■■□□ 2.42
TRIM35-203ENST00000521253 ROBO2Q9HCK4 1378 aa30.14■■■□□ 2.41
TRIM35-203ENST00000521253 PRAG1Q86YV5 1406 aa30.13■■■□□ 2.41
TRIM35-203ENST00000521253 SLAIN2Q9P270 581 aa30.13■■■□□ 2.41
TRIM35-203ENST00000521253 ATF3P18847 181 aa30.12■■■□□ 2.41
TRIM35-203ENST00000521253 CADPS2Q86UW7 1296 aa30.12■■■□□ 2.41
TRIM35-203ENST00000521253 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.11■■■□□ 2.41
TRIM35-203ENST00000521253 TMEM132EQ6IEE7 984 aa30.11■■■□□ 2.41
TRIM35-203ENST00000521253 DCAF11Q8TEB1 546 aa30.11■■■□□ 2.41
TRIM35-203ENST00000521253 C14orf93Q9H972 538 aaKnown RBP30.11■■■□□ 2.41
TRIM35-203ENST00000521253 ASXL1Q8IXJ9 1541 aa30.11■■■□□ 2.41
TRIM35-203ENST00000521253 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
TRIM35-203ENST00000521253 CFAP70Q5T0N1 1121 aa30.09■■■□□ 2.41
TRIM35-203ENST00000521253 KDM2AQ9Y2K7 1162 aa30.09■■■□□ 2.41
TRIM35-203ENST00000521253 ADGRL3Q9HAR2 1447 aa30.08■■■□□ 2.41
TRIM35-203ENST00000521253 DCCP43146 1447 aa30.07■■■□□ 2.4
TRIM35-203ENST00000521253 LRPPRCP42704 1394 aaKnown RBP30.07■■■□□ 2.4
TRIM35-203ENST00000521253 STK26Q9P289 416 aa30.07■■■□□ 2.4
TRIM35-203ENST00000521253 ROBO1Q9Y6N7 1651 aa30.05■■■□□ 2.4
TRIM35-203ENST00000521253 TECPR2O15040 1411 aa30.05■■■□□ 2.4
TRIM35-203ENST00000521253 STAC3Q96MF2 364 aa30.04■■■□□ 2.4
TRIM35-203ENST00000521253 ABCC11Q96J66 1382 aa30.03■■■□□ 2.4
TRIM35-203ENST00000521253 YTHDC2Q9H6S0 1430 aaKnown RBP30.03■■■□□ 2.4
TRIM35-203ENST00000521253 LAMC1P11047 1609 aa30.01■■■□□ 2.39
TRIM35-203ENST00000521253 NALCNQ8IZF0 1738 aa30.01■■■□□ 2.39
TRIM35-203ENST00000521253 MST1RQ04912 1400 aa29.98■■■□□ 2.39
TRIM35-203ENST00000521253 WAPLQ7Z5K2 1190 aa29.98■■■□□ 2.39
TRIM35-203ENST00000521253 SIN3AQ96ST3 1273 aa29.98■■■□□ 2.39
TRIM35-203ENST00000521253 PLEKHH1Q9ULM0 1364 aa29.95■■■□□ 2.39
TRIM35-203ENST00000521253 KNDC1Q76NI1 1749 aa29.95■■■□□ 2.38
TRIM35-203ENST00000521253 ADGRB1O14514 1584 aa29.94■■■□□ 2.38
TRIM35-203ENST00000521253 BRINP3Q76B58 766 aa29.93■■■□□ 2.38
TRIM35-203ENST00000521253 SIRT1Q96EB6 747 aa29.92■■■□□ 2.38
TRIM35-203ENST00000521253 NEUROD1Q13562 356 aa29.9■■■□□ 2.38
TRIM35-203ENST00000521253 C1orf167Q5SNV9 1468 aa29.87■■■□□ 2.37
TRIM35-203ENST00000521253 L3MBTL2Q969R5 705 aa29.87■■■□□ 2.37
TRIM35-203ENST00000521253 DISP3Q9P2K9 1392 aa29.87■■■□□ 2.37
TRIM35-203ENST00000521253 CDC42BPGQ6DT37 1551 aa29.86■■■□□ 2.37
TRIM35-203ENST00000521253 PRAM1Q96QH2 718 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms