RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 ZNF516Q92618 1163 aa8.04□□□□□ -1.12
VPS13B-208ENST00000521037 MTRQ99707 1265 aa8.04□□□□□ -1.12
VPS13B-208ENST00000521037 PPP1R18Q6NYC8 613 aa8.03□□□□□ -1.12
VPS13B-208ENST00000521037 TTC13Q8NBP0 860 aa8.03□□□□□ -1.12
VPS13B-208ENST00000521037 PRKD2Q9BZL6 878 aa8.03□□□□□ -1.12
VPS13B-208ENST00000521037 IL21Q9HBE4 155 aa8.02□□□□□ -1.13
VPS13B-208ENST00000521037 V9GY48 417 aaPredicted RBP8.02□□□□□ -1.13
VPS13B-208ENST00000521037 APLP1P51693 650 aa8.01□□□□□ -1.13
VPS13B-208ENST00000521037 CDHR5Q9HBB8 845 aa8.01□□□□□ -1.13
VPS13B-208ENST00000521037 NPDC1Q9NQX5 325 aaPredicted RBP8.01□□□□□ -1.13
VPS13B-208ENST00000521037 CLASP1Q7Z460 1538 aa8.01□□□□□ -1.13
VPS13B-208ENST00000521037 E2F4Q16254 413 aa8□□□□□ -1.13
VPS13B-208ENST00000521037 RBM27Q9P2N5 1060 aaKnown RBP8□□□□□ -1.13
VPS13B-208ENST00000521037 PNMA3Q9UL41 463 aa8□□□□□ -1.13
VPS13B-208ENST00000521037 EIF4G3O43432 1585 aaKnown RBP8□□□□□ -1.13
VPS13B-208ENST00000521037 CHD1O14646 1710 aa8□□□□□ -1.13
VPS13B-208ENST00000521037 IFT140Q96RY7 1462 aa8□□□□□ -1.13
VPS13B-208ENST00000521037 NRG2O14511 850 aaPredicted RBP7.99□□□□□ -1.13
VPS13B-208ENST00000521037 NKX2-3Q8TAU0 364 aa7.99□□□□□ -1.13
VPS13B-208ENST00000521037 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
VPS13B-208ENST00000521037 NBPF26B4DH59 902 aa7.98□□□□□ -1.13
VPS13B-208ENST00000521037 NUDT18Q6ZVK8 323 aa7.98□□□□□ -1.13
VPS13B-208ENST00000521037 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.98□□□□□ -1.13
VPS13B-208ENST00000521037 AQRO60306 1485 aaKnown RBP eCLIP7.95□□□□□ -1.14
VPS13B-208ENST00000521037 SPRYD3Q8NCJ5 442 aa7.95□□□□□ -1.14
VPS13B-208ENST00000521037 TARBP1Q13395 1621 aaKnown RBP7.94□□□□□ -1.14
VPS13B-208ENST00000521037 EYA1Q99502 592 aa7.94□□□□□ -1.14
VPS13B-208ENST00000521037 EMID1Q96A84 441 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-208ENST00000521037 WIZO95785 1651 aa7.92□□□□□ -1.14
VPS13B-208ENST00000521037 SWT1Q5T5J6 900 aaKnown RBP7.92□□□□□ -1.14
VPS13B-208ENST00000521037 TOPBP1Q92547 1522 aa7.92□□□□□ -1.14
VPS13B-208ENST00000521037 PADI6Q6TGC4 694 aa7.91□□□□□ -1.14
VPS13B-208ENST00000521037 TRIM67Q6ZTA4 783 aa7.91□□□□□ -1.14
VPS13B-208ENST00000521037 TMUB1Q9BVT8 246 aa7.91□□□□□ -1.14
VPS13B-208ENST00000521037 ZPR1O75312 459 aa7.9□□□□□ -1.14
VPS13B-208ENST00000521037 HDGFP51858 240 aaKnown RBP7.9□□□□□ -1.14
VPS13B-208ENST00000521037 PDZRN3Q9UPQ7 1066 aa7.89□□□□□ -1.15
VPS13B-208ENST00000521037 COPS2P61201 443 aa7.88□□□□□ -1.15
VPS13B-208ENST00000521037 SLF2Q8IX21 1173 aa7.88□□□□□ -1.15
VPS13B-208ENST00000521037 ERCC6L2Q5T890 1561 aa7.88□□□□□ -1.15
VPS13B-208ENST00000521037 GAPVD1Q14C86 1478 aa7.87□□□□□ -1.15
VPS13B-208ENST00000521037 SLC24A1O60721 1099 aa7.87□□□□□ -1.15
VPS13B-208ENST00000521037 RNF40O75150 1001 aa7.87□□□□□ -1.15
VPS13B-208ENST00000521037 KIF13AQ9H1H9 1805 aa7.87□□□□□ -1.15
VPS13B-208ENST00000521037 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
VPS13B-208ENST00000521037 WDR70Q9NW82 654 aa7.86□□□□□ -1.15
VPS13B-208ENST00000521037 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
VPS13B-208ENST00000521037 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
VPS13B-208ENST00000521037 GGCXP38435 758 aa7.84□□□□□ -1.15
VPS13B-208ENST00000521037 ZNF775Q96BV0 537 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-208ENST00000521037 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-208ENST00000521037 SNAPC4Q5SXM2 1469 aa7.82□□□□□ -1.16
VPS13B-208ENST00000521037 MLLT3P42568 568 aaPredicted RBP7.82□□□□□ -1.16
VPS13B-208ENST00000521037 BLOC1S3Q6QNY0 202 aa7.82□□□□□ -1.16
VPS13B-208ENST00000521037 POLA1P09884 1462 aaPredicted RBP7.81□□□□□ -1.16
VPS13B-208ENST00000521037 SLC19A1P41440 591 aa7.81□□□□□ -1.16
VPS13B-208ENST00000521037 PTGDRQ13258 359 aa7.81□□□□□ -1.16
VPS13B-208ENST00000521037 SPRYD7Q5W111 196 aa7.81□□□□□ -1.16
VPS13B-208ENST00000521037 PAXIP1Q6ZW49 1069 aaPredicted RBP7.81□□□□□ -1.16
VPS13B-208ENST00000521037 PCDHB3Q9Y5E6 796 aa7.81□□□□□ -1.16
VPS13B-208ENST00000521037 RAD54L2Q9Y4B4 1467 aa7.81□□□□□ -1.16
VPS13B-208ENST00000521037 DNMBPQ6XZF7 1577 aa7.8□□□□□ -1.16
VPS13B-208ENST00000521037 PRR20EP86478 221 aa7.8□□□□□ -1.16
VPS13B-208ENST00000521037 PRR20CP86479 221 aa7.8□□□□□ -1.16
VPS13B-208ENST00000521037 PRR20DP86480 221 aa7.8□□□□□ -1.16
VPS13B-208ENST00000521037 PRR20BP86481 221 aa7.8□□□□□ -1.16
VPS13B-208ENST00000521037 PRR20AP86496 221 aa7.8□□□□□ -1.16
VPS13B-208ENST00000521037 TMEM134Q9H6X4 195 aa7.8□□□□□ -1.16
VPS13B-208ENST00000521037 TDRD9Q8NDG6 1382 aaKnown RBP7.8□□□□□ -1.16
VPS13B-208ENST00000521037 HECW2Q9P2P5 1572 aa7.8□□□□□ -1.16
VPS13B-208ENST00000521037 PRDM2Q13029 1718 aa7.79□□□□□ -1.16
VPS13B-208ENST00000521037 MYT1Q01538 1121 aa7.79□□□□□ -1.16
VPS13B-208ENST00000521037 LIAT1Q6ZQX7 453 aa7.79□□□□□ -1.16
VPS13B-208ENST00000521037 CFAP44Q96MT7 982 aa7.79□□□□□ -1.16
VPS13B-208ENST00000521037 PRR14Q9BWN1 585 aa7.79□□□□□ -1.16
VPS13B-208ENST00000521037 ADGRG1Q9Y653 693 aa7.79□□□□□ -1.16
VPS13B-208ENST00000521037 SYNJ1O43426 1573 aa7.79□□□□□ -1.16
VPS13B-208ENST00000521037 POTECB2RU33 542 aa7.78□□□□□ -1.16
VPS13B-208ENST00000521037 ACTN4O43707 911 aaKnown RBP7.78□□□□□ -1.16
VPS13B-208ENST00000521037 TLL1O43897 1013 aa7.78□□□□□ -1.16
VPS13B-208ENST00000521037 ZNF598Q86UK7 904 aaKnown RBP7.78□□□□□ -1.16
VPS13B-208ENST00000521037 ANKLE1Q8NAG6 615 aa7.78□□□□□ -1.16
VPS13B-208ENST00000521037 ARHGEF1Q92888 912 aaKnown RBP7.78□□□□□ -1.16
VPS13B-208ENST00000521037 GDF9O60383 454 aa7.77□□□□□ -1.17
VPS13B-208ENST00000521037 SLC10A3P09131 477 aa7.77□□□□□ -1.17
VPS13B-208ENST00000521037 DNAJB2P25686 324 aa7.77□□□□□ -1.17
VPS13B-208ENST00000521037 AMER1Q5JTC6 1135 aaPredicted RBP7.77□□□□□ -1.17
VPS13B-208ENST00000521037 TOP2AP11388 1531 aaKnown RBP7.77□□□□□ -1.17
VPS13B-208ENST00000521037 PPEF1O14829 653 aaPredicted RBP7.76□□□□□ -1.17
VPS13B-208ENST00000521037 DGAT1O75907 488 aa7.76□□□□□ -1.17
VPS13B-208ENST00000521037 ILDR2Q71H61 639 aa7.76□□□□□ -1.17
VPS13B-208ENST00000521037 FBXO41Q8TF61 875 aa7.76□□□□□ -1.17
VPS13B-208ENST00000521037 ABCC8Q09428 1581 aa7.76□□□□□ -1.17
VPS13B-208ENST00000521037 MAGI1Q96QZ7 1491 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-208ENST00000521037 RCCD1A6NED2 376 aa7.75□□□□□ -1.17
VPS13B-208ENST00000521037 S1PR4O95977 384 aa7.75□□□□□ -1.17
VPS13B-208ENST00000521037 SYNJ2O15056 1496 aa7.75□□□□□ -1.17
VPS13B-208ENST00000521037 ABCC10Q5T3U5 1492 aa7.75□□□□□ -1.17
VPS13B-208ENST00000521037 SLC4A3P48751 1232 aa7.74□□□□□ -1.17
VPS13B-208ENST00000521037 FAM161AQ3B820 660 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms