RNA–Protein interactions for RNA: ENST00000520601.5

BRF2-202, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3 BASIC

Gene BRF2, Length 1,192 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-202ENST00000520601 NWD1Q149M9 1564 aa23.39■■□□□ 1.33
BRF2-202ENST00000520601 PIP4K2BP78356 416 aa23.38■■□□□ 1.33
BRF2-202ENST00000520601 SPHKAPQ2M3C7 1700 aa23.38■■□□□ 1.33
BRF2-202ENST00000520601 RIMS2Q9UQ26 1411 aa23.36■■□□□ 1.33
BRF2-202ENST00000520601 PLEKHG1Q9ULL1 1385 aa23.33■■□□□ 1.33
BRF2-202ENST00000520601 NAIPQ13075 1403 aa23.33■■□□□ 1.32
BRF2-202ENST00000520601 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
BRF2-202ENST00000520601 HSPA1LP34931 641 aa23.31■■□□□ 1.32
BRF2-202ENST00000520601 SLC26A8Q96RN1 970 aa23.31■■□□□ 1.32
BRF2-202ENST00000520601 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
BRF2-202ENST00000520601 DIP2AQ14689 1571 aa23.28■■□□□ 1.32
BRF2-202ENST00000520601 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
BRF2-202ENST00000520601 CHGAP10645 457 aaKnown RBP23.28■■□□□ 1.32
BRF2-202ENST00000520601 KCNA6P17658 529 aa23.28■■□□□ 1.32
BRF2-202ENST00000520601 PPP1R15AO75807 674 aaPredicted RBP23.27■■□□□ 1.32
BRF2-202ENST00000520601 TMEM94Q12767 1356 aa23.27■■□□□ 1.31
BRF2-202ENST00000520601 HFM1A2PYH4 1435 aa23.26■■□□□ 1.31
BRF2-202ENST00000520601 CLTCL1P53675 1640 aa23.25■■□□□ 1.31
BRF2-202ENST00000520601 TRPM2O94759 1503 aa23.24■■□□□ 1.31
BRF2-202ENST00000520601 BCANQ96GW7 911 aa23.24■■□□□ 1.31
BRF2-202ENST00000520601 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
BRF2-202ENST00000520601 HDGFP51858 240 aaKnown RBP23.23■■□□□ 1.31
BRF2-202ENST00000520601 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.23■■□□□ 1.31
BRF2-202ENST00000520601 ADAMTS13Q76LX8 1427 aa23.22■■□□□ 1.31
BRF2-202ENST00000520601 NRXN3Q9Y4C0 1643 aa23.19■■□□□ 1.3
BRF2-202ENST00000520601 KIF1BO60333 1816 aa23.18■■□□□ 1.3
BRF2-202ENST00000520601 NUTM2DQ5VT03 806 aaPredicted RBP23.18■■□□□ 1.3
BRF2-202ENST00000520601 PROSER2Q86WR7 435 aaPredicted RBP23.18■■□□□ 1.3
BRF2-202ENST00000520601 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
BRF2-202ENST00000520601 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
BRF2-202ENST00000520601 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
BRF2-202ENST00000520601 NEXMIFQ5QGS0 1516 aa23.15■■□□□ 1.3
BRF2-202ENST00000520601 RBM33Q96EV2 1170 aaKnown RBP23.15■■□□□ 1.3
BRF2-202ENST00000520601 PIK3R4Q99570 1358 aa23.14■■□□□ 1.29
BRF2-202ENST00000520601 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
BRF2-202ENST00000520601 MSH6P52701 1360 aa23.13■■□□□ 1.29
BRF2-202ENST00000520601 XRN1Q8IZH2 1706 aaKnown RBP23.12■■□□□ 1.29
BRF2-202ENST00000520601 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
BRF2-202ENST00000520601 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
BRF2-202ENST00000520601 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.29
BRF2-202ENST00000520601 ZNF326Q5BKZ1 582 aaKnown RBP23.08■■□□□ 1.29
BRF2-202ENST00000520601 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.07■■□□□ 1.28
BRF2-202ENST00000520601 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
BRF2-202ENST00000520601 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
BRF2-202ENST00000520601 SETD1AO15047 1707 aaKnown RBP23.03■■□□□ 1.28
BRF2-202ENST00000520601 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
BRF2-202ENST00000520601 PPLO60437 1756 aa23.03■■□□□ 1.28
BRF2-202ENST00000520601 AMOTL2Q9Y2J4 779 aa23■■□□□ 1.27
BRF2-202ENST00000520601 C14orf37Q86TY3 774 aa22.99■■□□□ 1.27
BRF2-202ENST00000520601 METP08581 1390 aa22.99■■□□□ 1.27
BRF2-202ENST00000520601 SLAIN2Q9P270 581 aa22.98■■□□□ 1.27
BRF2-202ENST00000520601 COL16A1Q07092 1604 aaPredicted RBP22.97■■□□□ 1.27
BRF2-202ENST00000520601 DCCP43146 1447 aa22.96■■□□□ 1.27
BRF2-202ENST00000520601 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
BRF2-202ENST00000520601 AHDC1Q5TGY3 1603 aaPredicted RBP22.94■■□□□ 1.26
BRF2-202ENST00000520601 FOXD1Q16676 465 aa22.94■■□□□ 1.26
BRF2-202ENST00000520601 IFT172Q9UG01 1749 aa22.94■■□□□ 1.26
BRF2-202ENST00000520601 CADPS2Q86UW7 1296 aa22.93■■□□□ 1.26
BRF2-202ENST00000520601 C19orf44Q9H6X5 657 aa22.93■■□□□ 1.26
BRF2-202ENST00000520601 CCDC144AA2RUR9 1427 aa22.92■■□□□ 1.26
BRF2-202ENST00000520601 RPGRIP1LQ68CZ1 1315 aa22.91■■□□□ 1.26
BRF2-202ENST00000520601 ATF3P18847 181 aa22.91■■□□□ 1.26
BRF2-202ENST00000520601 ADGRL3Q9HAR2 1447 aa22.91■■□□□ 1.26
BRF2-202ENST00000520601 PTCH1Q13635 1447 aa22.9■■□□□ 1.26
BRF2-202ENST00000520601 VGFO15240 615 aaPredicted RBP22.89■■□□□ 1.25
BRF2-202ENST00000520601 MPHOSPH9Q99550 1183 aa22.89■■□□□ 1.25
BRF2-202ENST00000520601 PRAG1Q86YV5 1406 aa22.89■■□□□ 1.25
BRF2-202ENST00000520601 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.25
BRF2-202ENST00000520601 SPATA31E1Q6ZUB1 1445 aa22.88■■□□□ 1.25
BRF2-202ENST00000520601 MST1RQ04912 1400 aa22.87■■□□□ 1.25
BRF2-202ENST00000520601 JCADQ9P266 1359 aa22.87■■□□□ 1.25
BRF2-202ENST00000520601 ASXL1Q8IXJ9 1541 aa22.87■■□□□ 1.25
BRF2-202ENST00000520601 SHPRHQ149N8 1683 aa22.85■■□□□ 1.25
BRF2-202ENST00000520601 NHSL1Q5SYE7 1610 aa22.85■■□□□ 1.25
BRF2-202ENST00000520601 RAB3GAP2Q9H2M9 1393 aa22.82■■□□□ 1.24
BRF2-202ENST00000520601 ROBO2Q9HCK4 1378 aa22.82■■□□□ 1.24
BRF2-202ENST00000520601 BRINP3Q76B58 766 aa22.82■■□□□ 1.24
BRF2-202ENST00000520601 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
BRF2-202ENST00000520601 RGS17Q9UGC6 210 aaPredicted RBP22.8■■□□□ 1.24
BRF2-202ENST00000520601 ANKRD30BQ9BXX2 1392 aa22.79■■□□□ 1.24
BRF2-202ENST00000520601 KNDC1Q76NI1 1749 aa22.79■■□□□ 1.24
BRF2-202ENST00000520601 ADGRF5Q8IZF2 1346 aa22.79■■□□□ 1.24
BRF2-202ENST00000520601 LRP6O75581 1613 aa22.78■■□□□ 1.24
BRF2-202ENST00000520601 PIK3C2GO75747 1445 aa22.77■■□□□ 1.24
BRF2-202ENST00000520601 RGL3Q3MIN7 710 aa22.76■■□□□ 1.23
BRF2-202ENST00000520601 CDC42BPGQ6DT37 1551 aa22.75■■□□□ 1.23
BRF2-202ENST00000520601 C1orf167Q5SNV9 1468 aa22.74■■□□□ 1.23
BRF2-202ENST00000520601 SPATA31A6Q5VVP1 1343 aa22.74■■□□□ 1.23
BRF2-202ENST00000520601 LAMC1P11047 1609 aa22.74■■□□□ 1.23
BRF2-202ENST00000520601 TECPR2O15040 1411 aa22.73■■□□□ 1.23
BRF2-202ENST00000520601 MYOM2P54296 1465 aa22.73■■□□□ 1.23
BRF2-202ENST00000520601 NRXN1Q9ULB1 1477 aa22.71■■□□□ 1.23
BRF2-202ENST00000520601 LRPPRCP42704 1394 aaKnown RBP22.7■■□□□ 1.22
BRF2-202ENST00000520601 POTEAQ6S8J7 498 aa22.68■■□□□ 1.22
BRF2-202ENST00000520601 DDX17Q92841 729 aaKnown RBP22.65■■□□□ 1.22
BRF2-202ENST00000520601 YTHDC2Q9H6S0 1430 aaKnown RBP22.65■■□□□ 1.22
BRF2-202ENST00000520601 ABCC11Q96J66 1382 aa22.64■■□□□ 1.22
BRF2-202ENST00000520601 PNPLA6Q8IY17 1366 aa22.63■■□□□ 1.21
BRF2-202ENST00000520601 FMN2Q9NZ56 1722 aa22.63■■□□□ 1.21
BRF2-202ENST00000520601 MEX3CQ5U5Q3 659 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms