RNA–Protein interactions for RNA: ENST00000520600.1

CHRNA2-205, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 1 (best)

Gene CHRNA2, Length 1,468 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-205ENST00000520600 PIP4K2BP78356 416 aa21.39■■□□□ 1.01
CHRNA2-205ENST00000520600 BCANQ96GW7 911 aa21.39■■□□□ 1.01
CHRNA2-205ENST00000520600 SLC26A8Q96RN1 970 aa21.39■■□□□ 1.01
CHRNA2-205ENST00000520600 PPP1R15AO75807 674 aaPredicted RBP21.38■■□□□ 1.01
CHRNA2-205ENST00000520600 HDGFP51858 240 aaKnown RBP21.37■■□□□ 1.01
CHRNA2-205ENST00000520600 PLEKHG1Q9ULL1 1385 aa21.35■■□□□ 1.01
CHRNA2-205ENST00000520600 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
CHRNA2-205ENST00000520600 XIRP1Q702N8 1843 aaKnown RBP21.35■■□□□ 1.01
CHRNA2-205ENST00000520600 ALKQ9UM73 1620 aa21.34■■□□□ 1.01
CHRNA2-205ENST00000520600 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
CHRNA2-205ENST00000520600 KCNA6P17658 529 aa21.32■■□□□ 1
CHRNA2-205ENST00000520600 TRIM52Q96A61 297 aa21.32■■□□□ 1
CHRNA2-205ENST00000520600 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
CHRNA2-205ENST00000520600 NWD1Q149M9 1564 aa21.31■■□□□ 1
CHRNA2-205ENST00000520600 NUTM2DQ5VT03 806 aaPredicted RBP21.31■■□□□ 1
CHRNA2-205ENST00000520600 TRPM2O94759 1503 aa21.29■■□□□ 1
CHRNA2-205ENST00000520600 CLTCL1P53675 1640 aa21.28■■□□□ 1
CHRNA2-205ENST00000520600 HSPA1LP34931 641 aa21.28■■□□□ 1
CHRNA2-205ENST00000520600 TMEM94Q12767 1356 aa21.28■■□□□ 1
CHRNA2-205ENST00000520600 NKTRP30414 1462 aaKnown RBP21.28■■□□□ 1
CHRNA2-205ENST00000520600 CHD2O14647 1828 aaKnown RBP21.28■■□□□ 1
CHRNA2-205ENST00000520600 DISP3Q9P2K9 1392 aa21.27■■□□□ 1
CHRNA2-205ENST00000520600 DIP2AQ14689 1571 aa21.26■□□□□ 0.99
CHRNA2-205ENST00000520600 PROSER2Q86WR7 435 aaPredicted RBP21.26■□□□□ 0.99
CHRNA2-205ENST00000520600 KIF1BO60333 1816 aa21.25■□□□□ 0.99
CHRNA2-205ENST00000520600 ZNF326Q5BKZ1 582 aaKnown RBP21.24■□□□□ 0.99
CHRNA2-205ENST00000520600 SLC4A1APQ9BWU0 796 aaKnown RBP21.24■□□□□ 0.99
CHRNA2-205ENST00000520600 TBX22Q9Y458 520 aa21.24■□□□□ 0.99
CHRNA2-205ENST00000520600 ADAMTS13Q76LX8 1427 aa21.24■□□□□ 0.99
CHRNA2-205ENST00000520600 RBM33Q96EV2 1170 aaKnown RBP21.22■□□□□ 0.99
CHRNA2-205ENST00000520600 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
CHRNA2-205ENST00000520600 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
CHRNA2-205ENST00000520600 NEXMIFQ5QGS0 1516 aa21.18■□□□□ 0.98
CHRNA2-205ENST00000520600 SETBP1Q9Y6X0 1596 aa21.17■□□□□ 0.98
CHRNA2-205ENST00000520600 MSH6P52701 1360 aa21.17■□□□□ 0.98
CHRNA2-205ENST00000520600 FOXD1Q16676 465 aa21.13■□□□□ 0.97
CHRNA2-205ENST00000520600 FAM135BQ49AJ0 1406 aa21.13■□□□□ 0.97
CHRNA2-205ENST00000520600 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
CHRNA2-205ENST00000520600 PTPRUQ92729 1446 aa21.12■□□□□ 0.97
CHRNA2-205ENST00000520600 AMOTL2Q9Y2J4 779 aa21.12■□□□□ 0.97
CHRNA2-205ENST00000520600 ROBO1Q9Y6N7 1651 aa21.11■□□□□ 0.97
CHRNA2-205ENST00000520600 NCOA3Q9Y6Q9 1424 aa21.11■□□□□ 0.97
CHRNA2-205ENST00000520600 MED1Q15648 1581 aaPredicted RBP21.11■□□□□ 0.97
CHRNA2-205ENST00000520600 C14orf37Q86TY3 774 aa21.11■□□□□ 0.97
CHRNA2-205ENST00000520600 SETD5Q9C0A6 1442 aa21.11■□□□□ 0.97
CHRNA2-205ENST00000520600 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
CHRNA2-205ENST00000520600 XRN1Q8IZH2 1706 aaKnown RBP21.1■□□□□ 0.97
CHRNA2-205ENST00000520600 ILDR2Q71H61 639 aa21.08■□□□□ 0.97
CHRNA2-205ENST00000520600 ACIN1Q9UKV3 1341 aaKnown RBP21.08■□□□□ 0.96
CHRNA2-205ENST00000520600 CCDC144AA2RUR9 1427 aa21.08■□□□□ 0.96
CHRNA2-205ENST00000520600 PPLO60437 1756 aa21.07■□□□□ 0.96
CHRNA2-205ENST00000520600 METP08581 1390 aa21.07■□□□□ 0.96
CHRNA2-205ENST00000520600 VGFO15240 615 aaPredicted RBP21.07■□□□□ 0.96
CHRNA2-205ENST00000520600 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.06■□□□□ 0.96
CHRNA2-205ENST00000520600 RPGRIP1LQ68CZ1 1315 aa21.06■□□□□ 0.96
CHRNA2-205ENST00000520600 SLAIN2Q9P270 581 aa21.06■□□□□ 0.96
CHRNA2-205ENST00000520600 C19orf44Q9H6X5 657 aa21.03■□□□□ 0.96
CHRNA2-205ENST00000520600 SETD1AO15047 1707 aaKnown RBP21.03■□□□□ 0.96
CHRNA2-205ENST00000520600 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
CHRNA2-205ENST00000520600 ATF3P18847 181 aa21.01■□□□□ 0.95
CHRNA2-205ENST00000520600 CADPS2Q86UW7 1296 aa21.01■□□□□ 0.95
CHRNA2-205ENST00000520600 PHLPP1O60346 1717 aa20.99■□□□□ 0.95
CHRNA2-205ENST00000520600 SPATA31E1Q6ZUB1 1445 aa20.99■□□□□ 0.95
CHRNA2-205ENST00000520600 DCCP43146 1447 aa20.98■□□□□ 0.95
CHRNA2-205ENST00000520600 RGL3Q3MIN7 710 aa20.98■□□□□ 0.95
CHRNA2-205ENST00000520600 IFT172Q9UG01 1749 aa20.98■□□□□ 0.95
CHRNA2-205ENST00000520600 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
CHRNA2-205ENST00000520600 ANKRD30BQ9BXX2 1392 aa20.94■□□□□ 0.94
CHRNA2-205ENST00000520600 PTCH1Q13635 1447 aa20.94■□□□□ 0.94
CHRNA2-205ENST00000520600 ADGRL3Q9HAR2 1447 aa20.94■□□□□ 0.94
CHRNA2-205ENST00000520600 NALCNQ8IZF0 1738 aa20.94■□□□□ 0.94
CHRNA2-205ENST00000520600 ADGRF5Q8IZF2 1346 aa20.94■□□□□ 0.94
CHRNA2-205ENST00000520600 COL16A1Q07092 1604 aaPredicted RBP20.92■□□□□ 0.94
CHRNA2-205ENST00000520600 PRAG1Q86YV5 1406 aa20.91■□□□□ 0.94
CHRNA2-205ENST00000520600 ROBO2Q9HCK4 1378 aa20.9■□□□□ 0.94
CHRNA2-205ENST00000520600 AHDC1Q5TGY3 1603 aaPredicted RBP20.9■□□□□ 0.94
CHRNA2-205ENST00000520600 SOCS7O14512 581 aa20.9■□□□□ 0.94
CHRNA2-205ENST00000520600 MST1RQ04912 1400 aa20.9■□□□□ 0.94
CHRNA2-205ENST00000520600 BRINP3Q76B58 766 aa20.88■□□□□ 0.93
CHRNA2-205ENST00000520600 JCADQ9P266 1359 aa20.88■□□□□ 0.93
CHRNA2-205ENST00000520600 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
CHRNA2-205ENST00000520600 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
CHRNA2-205ENST00000520600 HRCP23327 699 aa20.85■□□□□ 0.93
CHRNA2-205ENST00000520600 MYOM2P54296 1465 aa20.82■□□□□ 0.92
CHRNA2-205ENST00000520600 NHSL1Q5SYE7 1610 aa20.82■□□□□ 0.92
CHRNA2-205ENST00000520600 LRPPRCP42704 1394 aaKnown RBP20.82■□□□□ 0.92
CHRNA2-205ENST00000520600 KNDC1Q76NI1 1749 aa20.82■□□□□ 0.92
CHRNA2-205ENST00000520600 STK26Q9P289 416 aa20.81■□□□□ 0.92
CHRNA2-205ENST00000520600 SHPRHQ149N8 1683 aa20.81■□□□□ 0.92
CHRNA2-205ENST00000520600 NRXN1Q9ULB1 1477 aa20.81■□□□□ 0.92
CHRNA2-205ENST00000520600 TMEM132EQ6IEE7 984 aa20.81■□□□□ 0.92
CHRNA2-205ENST00000520600 TECPR2O15040 1411 aa20.8■□□□□ 0.92
CHRNA2-205ENST00000520600 C1orf167Q5SNV9 1468 aa20.8■□□□□ 0.92
CHRNA2-205ENST00000520600 LAMC1P11047 1609 aa20.8■□□□□ 0.92
CHRNA2-205ENST00000520600 RGS17Q9UGC6 210 aaPredicted RBP20.8■□□□□ 0.92
CHRNA2-205ENST00000520600 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
CHRNA2-205ENST00000520600 ABCC11Q96J66 1382 aa20.78■□□□□ 0.92
CHRNA2-205ENST00000520600 CDC42BPGQ6DT37 1551 aa20.78■□□□□ 0.92
CHRNA2-205ENST00000520600 YTHDC2Q9H6S0 1430 aaKnown RBP20.77■□□□□ 0.92
CHRNA2-205ENST00000520600 C14orf93Q9H972 538 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms