RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.55■■□□□ 1.04
R3HCC1-206ENST00000520480 BCANQ96GW7 911 aa21.54■■□□□ 1.04
R3HCC1-206ENST00000520480 LRRC7Q96NW7 1537 aa21.54■■□□□ 1.04
R3HCC1-206ENST00000520480 PLEKHG1Q9ULL1 1385 aa21.53■■□□□ 1.04
R3HCC1-206ENST00000520480 SLC26A8Q96RN1 970 aa21.53■■□□□ 1.04
R3HCC1-206ENST00000520480 TRPM2O94759 1503 aa21.53■■□□□ 1.04
R3HCC1-206ENST00000520480 TOM1O60784 492 aa21.51■■□□□ 1.03
R3HCC1-206ENST00000520480 SLC4A1APQ9BWU0 796 aaKnown RBP21.51■■□□□ 1.03
R3HCC1-206ENST00000520480 CLTCL1P53675 1640 aa21.48■■□□□ 1.03
R3HCC1-206ENST00000520480 KCNA6P17658 529 aa21.48■■□□□ 1.03
R3HCC1-206ENST00000520480 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
R3HCC1-206ENST00000520480 KIF1BO60333 1816 aa21.45■■□□□ 1.03
R3HCC1-206ENST00000520480 NUTM2DQ5VT03 806 aaPredicted RBP21.45■■□□□ 1.02
R3HCC1-206ENST00000520480 NWD1Q149M9 1564 aa21.44■■□□□ 1.02
R3HCC1-206ENST00000520480 ZNF326Q5BKZ1 582 aaKnown RBP21.44■■□□□ 1.02
R3HCC1-206ENST00000520480 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
R3HCC1-206ENST00000520480 TBX22Q9Y458 520 aa21.44■■□□□ 1.02
R3HCC1-206ENST00000520480 DIP2AQ14689 1571 aa21.44■■□□□ 1.02
R3HCC1-206ENST00000520480 PIP4K2BP78356 416 aa21.43■■□□□ 1.02
R3HCC1-206ENST00000520480 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
R3HCC1-206ENST00000520480 SETD5Q9C0A6 1442 aa21.43■■□□□ 1.02
R3HCC1-206ENST00000520480 NKTRP30414 1462 aaKnown RBP21.43■■□□□ 1.02
R3HCC1-206ENST00000520480 XIRP1Q702N8 1843 aaKnown RBP21.43■■□□□ 1.02
R3HCC1-206ENST00000520480 CHD2O14647 1828 aaKnown RBP21.41■■□□□ 1.02
R3HCC1-206ENST00000520480 ADAMTS13Q76LX8 1427 aa21.41■■□□□ 1.02
R3HCC1-206ENST00000520480 TMEM94Q12767 1356 aa21.4■■□□□ 1.02
R3HCC1-206ENST00000520480 MPHOSPH9Q99550 1183 aa21.4■■□□□ 1.02
R3HCC1-206ENST00000520480 ALKQ9UM73 1620 aa21.4■■□□□ 1.02
R3HCC1-206ENST00000520480 PROSER2Q86WR7 435 aaPredicted RBP21.39■■□□□ 1.01
R3HCC1-206ENST00000520480 PIK3R4Q99570 1358 aa21.38■■□□□ 1.01
R3HCC1-206ENST00000520480 NEXMIFQ5QGS0 1516 aa21.37■■□□□ 1.01
R3HCC1-206ENST00000520480 SETBP1Q9Y6X0 1596 aa21.36■■□□□ 1.01
R3HCC1-206ENST00000520480 FOXD1Q16676 465 aa21.36■■□□□ 1.01
R3HCC1-206ENST00000520480 NRXN3Q9Y4C0 1643 aa21.34■■□□□ 1.01
R3HCC1-206ENST00000520480 RAB3GAP2Q9H2M9 1393 aa21.34■■□□□ 1.01
R3HCC1-206ENST00000520480 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
R3HCC1-206ENST00000520480 RPGRIP1LQ68CZ1 1315 aa21.32■■□□□ 1
R3HCC1-206ENST00000520480 HSPA1LP34931 641 aa21.32■■□□□ 1
R3HCC1-206ENST00000520480 RBM33Q96EV2 1170 aaKnown RBP21.31■■□□□ 1
R3HCC1-206ENST00000520480 VGFO15240 615 aaPredicted RBP21.3■■□□□ 1
R3HCC1-206ENST00000520480 MSH6P52701 1360 aa21.3■■□□□ 1
R3HCC1-206ENST00000520480 NCOA3Q9Y6Q9 1424 aa21.29■■□□□ 1
R3HCC1-206ENST00000520480 AMOTL2Q9Y2J4 779 aa21.28■■□□□ 1
R3HCC1-206ENST00000520480 PPLO60437 1756 aa21.28■■□□□ 1
R3HCC1-206ENST00000520480 PTPRUQ92729 1446 aa21.26■□□□□ 0.99
R3HCC1-206ENST00000520480 C14orf37Q86TY3 774 aa21.25■□□□□ 0.99
R3HCC1-206ENST00000520480 XRN1Q8IZH2 1706 aaKnown RBP21.25■□□□□ 0.99
R3HCC1-206ENST00000520480 METP08581 1390 aa21.24■□□□□ 0.99
R3HCC1-206ENST00000520480 SPATA31E1Q6ZUB1 1445 aa21.24■□□□□ 0.99
R3HCC1-206ENST00000520480 HRCP23327 699 aa21.24■□□□□ 0.99
R3HCC1-206ENST00000520480 FAM135BQ49AJ0 1406 aa21.23■□□□□ 0.99
R3HCC1-206ENST00000520480 DISP3Q9P2K9 1392 aa21.22■□□□□ 0.99
R3HCC1-206ENST00000520480 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
R3HCC1-206ENST00000520480 C19orf44Q9H6X5 657 aa21.2■□□□□ 0.98
R3HCC1-206ENST00000520480 SLAIN2Q9P270 581 aa21.2■□□□□ 0.98
R3HCC1-206ENST00000520480 ANKRD30BQ9BXX2 1392 aa21.2■□□□□ 0.98
R3HCC1-206ENST00000520480 ROBO1Q9Y6N7 1651 aa21.19■□□□□ 0.98
R3HCC1-206ENST00000520480 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
R3HCC1-206ENST00000520480 IFT172Q9UG01 1749 aa21.19■□□□□ 0.98
R3HCC1-206ENST00000520480 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.18■□□□□ 0.98
R3HCC1-206ENST00000520480 CADPS2Q86UW7 1296 aa21.18■□□□□ 0.98
R3HCC1-206ENST00000520480 ATF3P18847 181 aa21.17■□□□□ 0.98
R3HCC1-206ENST00000520480 DCCP43146 1447 aa21.14■□□□□ 0.98
R3HCC1-206ENST00000520480 ADGRF5Q8IZF2 1346 aa21.14■□□□□ 0.97
R3HCC1-206ENST00000520480 PTCH1Q13635 1447 aa21.12■□□□□ 0.97
R3HCC1-206ENST00000520480 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
R3HCC1-206ENST00000520480 MED1Q15648 1581 aaPredicted RBP21.1■□□□□ 0.97
R3HCC1-206ENST00000520480 PIK3C2GO75747 1445 aa21.1■□□□□ 0.97
R3HCC1-206ENST00000520480 ADGRL3Q9HAR2 1447 aa21.1■□□□□ 0.97
R3HCC1-206ENST00000520480 NALCNQ8IZF0 1738 aa21.08■□□□□ 0.97
R3HCC1-206ENST00000520480 ROBO2Q9HCK4 1378 aa21.08■□□□□ 0.96
R3HCC1-206ENST00000520480 MYOM2P54296 1465 aa21.07■□□□□ 0.96
R3HCC1-206ENST00000520480 PHLPP1O60346 1717 aa21.07■□□□□ 0.96
R3HCC1-206ENST00000520480 NRXN1Q9ULB1 1477 aa21.05■□□□□ 0.96
R3HCC1-206ENST00000520480 LAMC1P11047 1609 aa21.04■□□□□ 0.96
R3HCC1-206ENST00000520480 MST1RQ04912 1400 aa21.04■□□□□ 0.96
R3HCC1-206ENST00000520480 LRPPRCP42704 1394 aaKnown RBP21.03■□□□□ 0.96
R3HCC1-206ENST00000520480 TECPR2O15040 1411 aa21.02■□□□□ 0.96
R3HCC1-206ENST00000520480 AHDC1Q5TGY3 1603 aaPredicted RBP21.01■□□□□ 0.95
R3HCC1-206ENST00000520480 ASXL1Q8IXJ9 1541 aa21.01■□□□□ 0.95
R3HCC1-206ENST00000520480 BRINP3Q76B58 766 aa21.01■□□□□ 0.95
R3HCC1-206ENST00000520480 C14orf93Q9H972 538 aaKnown RBP21.01■□□□□ 0.95
R3HCC1-206ENST00000520480 STK26Q9P289 416 aa21.01■□□□□ 0.95
R3HCC1-206ENST00000520480 KNDC1Q76NI1 1749 aa21.01■□□□□ 0.95
R3HCC1-206ENST00000520480 COL16A1Q07092 1604 aaPredicted RBP21■□□□□ 0.95
R3HCC1-206ENST00000520480 ABCC11Q96J66 1382 aa21■□□□□ 0.95
R3HCC1-206ENST00000520480 TMEM132EQ6IEE7 984 aa21■□□□□ 0.95
R3HCC1-206ENST00000520480 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
R3HCC1-206ENST00000520480 JCADQ9P266 1359 aa20.98■□□□□ 0.95
R3HCC1-206ENST00000520480 YTHDC2Q9H6S0 1430 aaKnown RBP20.98■□□□□ 0.95
R3HCC1-206ENST00000520480 ILDR2Q71H61 639 aa20.98■□□□□ 0.95
R3HCC1-206ENST00000520480 STAC3Q96MF2 364 aa20.98■□□□□ 0.95
R3HCC1-206ENST00000520480 CFAP70Q5T0N1 1121 aa20.97■□□□□ 0.95
R3HCC1-206ENST00000520480 DCAF11Q8TEB1 546 aa20.97■□□□□ 0.95
R3HCC1-206ENST00000520480 DHX57Q6P158 1386 aaKnown RBP20.96■□□□□ 0.95
R3HCC1-206ENST00000520480 C1orf167Q5SNV9 1468 aa20.95■□□□□ 0.94
R3HCC1-206ENST00000520480 CDC42BPGQ6DT37 1551 aa20.95■□□□□ 0.94
R3HCC1-206ENST00000520480 NHSL1Q5SYE7 1610 aa20.94■□□□□ 0.94
R3HCC1-206ENST00000520480 WAPLQ7Z5K2 1190 aa20.94■□□□□ 0.94
R3HCC1-206ENST00000520480 SIRT1Q96EB6 747 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms