RNA–Protein interactions for RNA: ENST00000520057.1

IGHV3-62-201, Transcript of immunoglobulin heavy variable 3-62 (pseudogene), humanhuman

BASIC

Gene IGHV3-62, Length 340 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-62-201ENST00000520057 FOXD1Q16676 465 aa24.4■■□□□ 1.5
IGHV3-62-201ENST00000520057 NUTM2DQ5VT03 806 aaPredicted RBP24.4■■□□□ 1.5
IGHV3-62-201ENST00000520057 SLC26A8Q96RN1 970 aa24.38■■□□□ 1.49
IGHV3-62-201ENST00000520057 LTBP4Q8N2S1 1624 aa24.38■■□□□ 1.49
IGHV3-62-201ENST00000520057 SPHKAPQ2M3C7 1700 aa24.36■■□□□ 1.49
IGHV3-62-201ENST00000520057 TMEM131LA2VDJ0 1609 aa24.35■■□□□ 1.49
IGHV3-62-201ENST00000520057 TRPM2O94759 1503 aa24.35■■□□□ 1.49
IGHV3-62-201ENST00000520057 CPS1P31327 1500 aa24.33■■□□□ 1.49
IGHV3-62-201ENST00000520057 ZFYVE9O95405 1425 aa24.33■■□□□ 1.49
IGHV3-62-201ENST00000520057 PLEKHG1Q9ULL1 1385 aa24.32■■□□□ 1.48
IGHV3-62-201ENST00000520057 CCDC144AA2RUR9 1427 aa24.3■■□□□ 1.48
IGHV3-62-201ENST00000520057 HRCP23327 699 aa24.3■■□□□ 1.48
IGHV3-62-201ENST00000520057 IQSEC2Q5JU85 1478 aa24.3■■□□□ 1.48
IGHV3-62-201ENST00000520057 UBAP1LF5GYI3 381 aa24.28■■□□□ 1.48
IGHV3-62-201ENST00000520057 CLTCL1P53675 1640 aa24.27■■□□□ 1.48
IGHV3-62-201ENST00000520057 KCNA6P17658 529 aa24.26■■□□□ 1.47
IGHV3-62-201ENST00000520057 TBX22Q9Y458 520 aa24.25■■□□□ 1.47
IGHV3-62-201ENST00000520057 MYO5BQ9ULV0 1848 aa24.24■■□□□ 1.47
IGHV3-62-201ENST00000520057 VGFO15240 615 aaPredicted RBP24.24■■□□□ 1.47
IGHV3-62-201ENST00000520057 RGL3Q3MIN7 710 aa24.24■■□□□ 1.47
IGHV3-62-201ENST00000520057 TOM1O60784 492 aa24.23■■□□□ 1.47
IGHV3-62-201ENST00000520057 RPGRIP1LQ68CZ1 1315 aa24.23■■□□□ 1.47
IGHV3-62-201ENST00000520057 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
IGHV3-62-201ENST00000520057 PROSER2Q86WR7 435 aaPredicted RBP24.22■■□□□ 1.47
IGHV3-62-201ENST00000520057 KIF1BO60333 1816 aa24.19■■□□□ 1.46
IGHV3-62-201ENST00000520057 LRRC7Q96NW7 1537 aa24.17■■□□□ 1.46
IGHV3-62-201ENST00000520057 PIP4K2BP78356 416 aa24.16■■□□□ 1.46
IGHV3-62-201ENST00000520057 ADAMTS13Q76LX8 1427 aa24.15■■□□□ 1.46
IGHV3-62-201ENST00000520057 TRIM26Q12899 539 aaPredicted RBP24.14■■□□□ 1.45
IGHV3-62-201ENST00000520057 C14orf37Q86TY3 774 aa24.14■■□□□ 1.45
IGHV3-62-201ENST00000520057 TMEM94Q12767 1356 aa24.13■■□□□ 1.45
IGHV3-62-201ENST00000520057 PIK3R4Q99570 1358 aa24.13■■□□□ 1.45
IGHV3-62-201ENST00000520057 NEXMIFQ5QGS0 1516 aa24.12■■□□□ 1.45
IGHV3-62-201ENST00000520057 RBM33Q96EV2 1170 aaKnown RBP24.12■■□□□ 1.45
IGHV3-62-201ENST00000520057 DIP2AQ14689 1571 aa24.12■■□□□ 1.45
IGHV3-62-201ENST00000520057 AMOTL2Q9Y2J4 779 aa24.11■■□□□ 1.45
IGHV3-62-201ENST00000520057 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
IGHV3-62-201ENST00000520057 ANKRD30BQ9BXX2 1392 aa24.09■■□□□ 1.45
IGHV3-62-201ENST00000520057 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.45
IGHV3-62-201ENST00000520057 SPATA31E1Q6ZUB1 1445 aa24.07■■□□□ 1.44
IGHV3-62-201ENST00000520057 SETBP1Q9Y6X0 1596 aa24.07■■□□□ 1.44
IGHV3-62-201ENST00000520057 MSH6P52701 1360 aa24.05■■□□□ 1.44
IGHV3-62-201ENST00000520057 NWD1Q149M9 1564 aa24.04■■□□□ 1.44
IGHV3-62-201ENST00000520057 METP08581 1390 aa24.03■■□□□ 1.44
IGHV3-62-201ENST00000520057 ADGRF5Q8IZF2 1346 aa24.03■■□□□ 1.44
IGHV3-62-201ENST00000520057 PTPRUQ92729 1446 aa23.99■■□□□ 1.43
IGHV3-62-201ENST00000520057 ATF3P18847 181 aa23.98■■□□□ 1.43
IGHV3-62-201ENST00000520057 KDM2AQ9Y2K7 1162 aa23.98■■□□□ 1.43
IGHV3-62-201ENST00000520057 NRXN3Q9Y4C0 1643 aa23.98■■□□□ 1.43
IGHV3-62-201ENST00000520057 CHD2O14647 1828 aaKnown RBP23.98■■□□□ 1.43
IGHV3-62-201ENST00000520057 DCAF11Q8TEB1 546 aa23.97■■□□□ 1.43
IGHV3-62-201ENST00000520057 C19orf44Q9H6X5 657 aa23.97■■□□□ 1.43
IGHV3-62-201ENST00000520057 NCOA3Q9Y6Q9 1424 aa23.97■■□□□ 1.43
IGHV3-62-201ENST00000520057 PPLO60437 1756 aa23.96■■□□□ 1.43
IGHV3-62-201ENST00000520057 ALKQ9UM73 1620 aa23.95■■□□□ 1.42
IGHV3-62-201ENST00000520057 CADPS2Q86UW7 1296 aa23.94■■□□□ 1.42
IGHV3-62-201ENST00000520057 HSPA1LP34931 641 aa23.93■■□□□ 1.42
IGHV3-62-201ENST00000520057 STK26Q9P289 416 aa23.93■■□□□ 1.42
IGHV3-62-201ENST00000520057 STAC3Q96MF2 364 aa23.92■■□□□ 1.42
IGHV3-62-201ENST00000520057 SLAIN2Q9P270 581 aa23.92■■□□□ 1.42
IGHV3-62-201ENST00000520057 TMEM132EQ6IEE7 984 aa23.9■■□□□ 1.42
IGHV3-62-201ENST00000520057 PIK3C2GO75747 1445 aa23.9■■□□□ 1.42
IGHV3-62-201ENST00000520057 C14orf93Q9H972 538 aaKnown RBP23.89■■□□□ 1.41
IGHV3-62-201ENST00000520057 MYOM2P54296 1465 aa23.88■■□□□ 1.41
IGHV3-62-201ENST00000520057 CFAP70Q5T0N1 1121 aa23.88■■□□□ 1.41
IGHV3-62-201ENST00000520057 XIRP1Q702N8 1843 aaKnown RBP23.87■■□□□ 1.41
IGHV3-62-201ENST00000520057 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
IGHV3-62-201ENST00000520057 XRN1Q8IZH2 1706 aaKnown RBP23.86■■□□□ 1.41
IGHV3-62-201ENST00000520057 FAM135BQ49AJ0 1406 aa23.85■■□□□ 1.41
IGHV3-62-201ENST00000520057 DHX57Q6P158 1386 aaKnown RBP23.85■■□□□ 1.41
IGHV3-62-201ENST00000520057 ROBO2Q9HCK4 1378 aa23.85■■□□□ 1.41
IGHV3-62-201ENST00000520057 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
IGHV3-62-201ENST00000520057 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
IGHV3-62-201ENST00000520057 LRPPRCP42704 1394 aaKnown RBP23.83■■□□□ 1.41
IGHV3-62-201ENST00000520057 SIN3AQ96ST3 1273 aa23.81■■□□□ 1.4
IGHV3-62-201ENST00000520057 ADGRL3Q9HAR2 1447 aa23.81■■□□□ 1.4
IGHV3-62-201ENST00000520057 NRXN1Q9ULB1 1477 aa23.81■■□□□ 1.4
IGHV3-62-201ENST00000520057 DCCP43146 1447 aa23.8■■□□□ 1.4
IGHV3-62-201ENST00000520057 ABCC11Q96J66 1382 aa23.79■■□□□ 1.4
IGHV3-62-201ENST00000520057 YTHDC2Q9H6S0 1430 aaKnown RBP23.79■■□□□ 1.4
IGHV3-62-201ENST00000520057 WAPLQ7Z5K2 1190 aa23.78■■□□□ 1.4
IGHV3-62-201ENST00000520057 SETD1AO15047 1707 aaKnown RBP23.78■■□□□ 1.4
IGHV3-62-201ENST00000520057 PCGF6Q9BYE7 350 aa23.77■■□□□ 1.4
IGHV3-62-201ENST00000520057 POGKQ9P215 609 aa23.77■■□□□ 1.4
IGHV3-62-201ENST00000520057 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
IGHV3-62-201ENST00000520057 PRAG1Q86YV5 1406 aa23.76■■□□□ 1.39
IGHV3-62-201ENST00000520057 TRAK1Q9UPV9 953 aa23.74■■□□□ 1.39
IGHV3-62-201ENST00000520057 TECPR2O15040 1411 aa23.74■■□□□ 1.39
IGHV3-62-201ENST00000520057 LAMC1P11047 1609 aa23.73■■□□□ 1.39
IGHV3-62-201ENST00000520057 L3MBTL2Q969R5 705 aa23.73■■□□□ 1.39
IGHV3-62-201ENST00000520057 SIRT1Q96EB6 747 aa23.73■■□□□ 1.39
IGHV3-62-201ENST00000520057 ROBO1Q9Y6N7 1651 aa23.73■■□□□ 1.39
IGHV3-62-201ENST00000520057 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
IGHV3-62-201ENST00000520057 PRAM1Q96QH2 718 aa23.72■■□□□ 1.39
IGHV3-62-201ENST00000520057 ASXL1Q8IXJ9 1541 aa23.71■■□□□ 1.39
IGHV3-62-201ENST00000520057 BRINP3Q76B58 766 aa23.71■■□□□ 1.39
IGHV3-62-201ENST00000520057 DISP3Q9P2K9 1392 aa23.7■■□□□ 1.38
IGHV3-62-201ENST00000520057 MST1RQ04912 1400 aa23.69■■□□□ 1.38
IGHV3-62-201ENST00000520057 PLEKHH1Q9ULM0 1364 aa23.69■■□□□ 1.38
IGHV3-62-201ENST00000520057 NUTM2FA1L443 756 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms