RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 TOM1O60784 492 aa19.15■□□□□ 0.66
MCPH1-202ENST00000519221 CHGAP10645 457 aaKnown RBP19.14■□□□□ 0.65
MCPH1-202ENST00000519221 PPP1R15AO75807 674 aaPredicted RBP19.13■□□□□ 0.65
MCPH1-202ENST00000519221 XIRP1Q702N8 1843 aaKnown RBP19.12■□□□□ 0.65
MCPH1-202ENST00000519221 TRPM2O94759 1503 aa19.12■□□□□ 0.65
MCPH1-202ENST00000519221 KIF1BO60333 1816 aa19.11■□□□□ 0.65
MCPH1-202ENST00000519221 KCNA6P17658 529 aa19.11■□□□□ 0.65
MCPH1-202ENST00000519221 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
MCPH1-202ENST00000519221 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
MCPH1-202ENST00000519221 CHD2O14647 1828 aaKnown RBP19.1■□□□□ 0.65
MCPH1-202ENST00000519221 BCANQ96GW7 911 aa19.1■□□□□ 0.65
MCPH1-202ENST00000519221 SLC26A8Q96RN1 970 aa19.1■□□□□ 0.65
MCPH1-202ENST00000519221 ACIN1Q9UKV3 1341 aaKnown RBP19.09■□□□□ 0.65
MCPH1-202ENST00000519221 DIP2AQ14689 1571 aa19.09■□□□□ 0.65
MCPH1-202ENST00000519221 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
MCPH1-202ENST00000519221 CLTCL1P53675 1640 aa19.08■□□□□ 0.65
MCPH1-202ENST00000519221 ALKQ9UM73 1620 aa19.07■□□□□ 0.64
MCPH1-202ENST00000519221 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
MCPH1-202ENST00000519221 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
MCPH1-202ENST00000519221 PIP4K2BP78356 416 aa19.04■□□□□ 0.64
MCPH1-202ENST00000519221 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
MCPH1-202ENST00000519221 PIK3R4Q99570 1358 aa19.04■□□□□ 0.64
MCPH1-202ENST00000519221 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
MCPH1-202ENST00000519221 TMEM94Q12767 1356 aa19.03■□□□□ 0.64
MCPH1-202ENST00000519221 PROSER2Q86WR7 435 aaPredicted RBP19.02■□□□□ 0.64
MCPH1-202ENST00000519221 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
MCPH1-202ENST00000519221 NUTM2DQ5VT03 806 aaPredicted RBP19.01■□□□□ 0.63
MCPH1-202ENST00000519221 SETBP1Q9Y6X0 1596 aa19.01■□□□□ 0.63
MCPH1-202ENST00000519221 NEXMIFQ5QGS0 1516 aa19■□□□□ 0.63
MCPH1-202ENST00000519221 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
MCPH1-202ENST00000519221 NRXN3Q9Y4C0 1643 aa18.99■□□□□ 0.63
MCPH1-202ENST00000519221 DISP3Q9P2K9 1392 aa18.98■□□□□ 0.63
MCPH1-202ENST00000519221 NCOA3Q9Y6Q9 1424 aa18.98■□□□□ 0.63
MCPH1-202ENST00000519221 HSPA1LP34931 641 aa18.97■□□□□ 0.63
MCPH1-202ENST00000519221 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
MCPH1-202ENST00000519221 MPHOSPH9Q99550 1183 aa18.96■□□□□ 0.63
MCPH1-202ENST00000519221 RPGRIP1LQ68CZ1 1315 aa18.96■□□□□ 0.63
MCPH1-202ENST00000519221 MSH6P52701 1360 aa18.94■□□□□ 0.62
MCPH1-202ENST00000519221 PPLO60437 1756 aa18.94■□□□□ 0.62
MCPH1-202ENST00000519221 ILDR2Q71H61 639 aa18.94■□□□□ 0.62
MCPH1-202ENST00000519221 CCDC144AA2RUR9 1427 aa18.92■□□□□ 0.62
MCPH1-202ENST00000519221 FAM135BQ49AJ0 1406 aa18.92■□□□□ 0.62
MCPH1-202ENST00000519221 XRN1Q8IZH2 1706 aaKnown RBP18.92■□□□□ 0.62
MCPH1-202ENST00000519221 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
MCPH1-202ENST00000519221 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
MCPH1-202ENST00000519221 FOXD1Q16676 465 aa18.9■□□□□ 0.62
MCPH1-202ENST00000519221 RBM33Q96EV2 1170 aaKnown RBP18.9■□□□□ 0.62
MCPH1-202ENST00000519221 AMOTL2Q9Y2J4 779 aa18.9■□□□□ 0.62
MCPH1-202ENST00000519221 RAB3GAP2Q9H2M9 1393 aa18.9■□□□□ 0.62
MCPH1-202ENST00000519221 SETD1AO15047 1707 aaKnown RBP18.87■□□□□ 0.61
MCPH1-202ENST00000519221 METP08581 1390 aa18.87■□□□□ 0.61
MCPH1-202ENST00000519221 HRCP23327 699 aa18.87■□□□□ 0.61
MCPH1-202ENST00000519221 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.87■□□□□ 0.61
MCPH1-202ENST00000519221 ROBO1Q9Y6N7 1651 aa18.87■□□□□ 0.61
MCPH1-202ENST00000519221 SPATA31E1Q6ZUB1 1445 aa18.86■□□□□ 0.61
MCPH1-202ENST00000519221 C19orf44Q9H6X5 657 aa18.86■□□□□ 0.61
MCPH1-202ENST00000519221 IFT172Q9UG01 1749 aa18.86■□□□□ 0.61
MCPH1-202ENST00000519221 C14orf37Q86TY3 774 aa18.85■□□□□ 0.61
MCPH1-202ENST00000519221 SLAIN2Q9P270 581 aa18.85■□□□□ 0.61
MCPH1-202ENST00000519221 CADPS2Q86UW7 1296 aa18.84■□□□□ 0.61
MCPH1-202ENST00000519221 DCCP43146 1447 aa18.83■□□□□ 0.61
MCPH1-202ENST00000519221 ANKRD30BQ9BXX2 1392 aa18.83■□□□□ 0.61
MCPH1-202ENST00000519221 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
MCPH1-202ENST00000519221 PRAG1Q86YV5 1406 aa18.82■□□□□ 0.6
MCPH1-202ENST00000519221 SOCS7O14512 581 aa18.81■□□□□ 0.6
MCPH1-202ENST00000519221 ATF3P18847 181 aa18.81■□□□□ 0.6
MCPH1-202ENST00000519221 PTCH1Q13635 1447 aa18.8■□□□□ 0.6
MCPH1-202ENST00000519221 RGL3Q3MIN7 710 aa18.79■□□□□ 0.6
MCPH1-202ENST00000519221 PHLPP1O60346 1717 aa18.78■□□□□ 0.6
MCPH1-202ENST00000519221 ADGRL3Q9HAR2 1447 aa18.77■□□□□ 0.6
MCPH1-202ENST00000519221 NALCNQ8IZF0 1738 aa18.76■□□□□ 0.59
MCPH1-202ENST00000519221 ADGRF5Q8IZF2 1346 aa18.75■□□□□ 0.59
MCPH1-202ENST00000519221 PIK3C2GO75747 1445 aa18.74■□□□□ 0.59
MCPH1-202ENST00000519221 AHDC1Q5TGY3 1603 aaPredicted RBP18.73■□□□□ 0.59
MCPH1-202ENST00000519221 MYOM2P54296 1465 aa18.72■□□□□ 0.59
MCPH1-202ENST00000519221 ROBO2Q9HCK4 1378 aa18.72■□□□□ 0.59
MCPH1-202ENST00000519221 LAMC1P11047 1609 aa18.71■□□□□ 0.59
MCPH1-202ENST00000519221 COL16A1Q07092 1604 aaPredicted RBP18.71■□□□□ 0.59
MCPH1-202ENST00000519221 MST1RQ04912 1400 aa18.71■□□□□ 0.59
MCPH1-202ENST00000519221 KNDC1Q76NI1 1749 aa18.71■□□□□ 0.59
MCPH1-202ENST00000519221 NRXN1Q9ULB1 1477 aa18.71■□□□□ 0.59
MCPH1-202ENST00000519221 TECPR2O15040 1411 aa18.7■□□□□ 0.58
MCPH1-202ENST00000519221 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
MCPH1-202ENST00000519221 JCADQ9P266 1359 aa18.68■□□□□ 0.58
MCPH1-202ENST00000519221 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
MCPH1-202ENST00000519221 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
MCPH1-202ENST00000519221 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
MCPH1-202ENST00000519221 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
MCPH1-202ENST00000519221 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
MCPH1-202ENST00000519221 NHSL1Q5SYE7 1610 aa18.67■□□□□ 0.58
MCPH1-202ENST00000519221 C14orf93Q9H972 538 aaKnown RBP18.66■□□□□ 0.58
MCPH1-202ENST00000519221 CDC42BPGQ6DT37 1551 aa18.64■□□□□ 0.58
MCPH1-202ENST00000519221 SHPRHQ149N8 1683 aa18.64■□□□□ 0.57
MCPH1-202ENST00000519221 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.57
MCPH1-202ENST00000519221 C1orf167Q5SNV9 1468 aa18.63■□□□□ 0.57
MCPH1-202ENST00000519221 SIRT1Q96EB6 747 aa18.62■□□□□ 0.57
MCPH1-202ENST00000519221 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
MCPH1-202ENST00000519221 SPATA31A6Q5VVP1 1343 aa18.61■□□□□ 0.57
MCPH1-202ENST00000519221 TMEM132EQ6IEE7 984 aa18.61■□□□□ 0.57
MCPH1-202ENST00000519221 STK26Q9P289 416 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms