RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 RIMS2Q9UQ26 1411 aa24.01■■□□□ 1.43
MRPS28-204ENST00000519120 HSPA1LP34931 641 aa24.01■■□□□ 1.43
MRPS28-204ENST00000519120 NWD1Q149M9 1564 aa24■■□□□ 1.43
MRPS28-204ENST00000519120 SLC26A8Q96RN1 970 aa24■■□□□ 1.43
MRPS28-204ENST00000519120 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
MRPS28-204ENST00000519120 MYO5BQ9ULV0 1848 aa23.99■■□□□ 1.43
MRPS28-204ENST00000519120 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.99■■□□□ 1.43
MRPS28-204ENST00000519120 XIRP1Q702N8 1843 aaKnown RBP23.98■■□□□ 1.43
MRPS28-204ENST00000519120 NAIPQ13075 1403 aa23.96■■□□□ 1.43
MRPS28-204ENST00000519120 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.42
MRPS28-204ENST00000519120 TMEM94Q12767 1356 aa23.94■■□□□ 1.42
MRPS28-204ENST00000519120 TBX22Q9Y458 520 aa23.93■■□□□ 1.42
MRPS28-204ENST00000519120 CHGAP10645 457 aaKnown RBP23.92■■□□□ 1.42
MRPS28-204ENST00000519120 BCANQ96GW7 911 aa23.92■■□□□ 1.42
MRPS28-204ENST00000519120 SPHKAPQ2M3C7 1700 aa23.92■■□□□ 1.42
MRPS28-204ENST00000519120 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
MRPS28-204ENST00000519120 HFM1A2PYH4 1435 aa23.91■■□□□ 1.42
MRPS28-204ENST00000519120 ILDR2Q71H61 639 aa23.9■■□□□ 1.42
MRPS28-204ENST00000519120 PROSER2Q86WR7 435 aaPredicted RBP23.9■■□□□ 1.42
MRPS28-204ENST00000519120 PIK3R4Q99570 1358 aa23.89■■□□□ 1.41
MRPS28-204ENST00000519120 CHD2O14647 1828 aaKnown RBP23.89■■□□□ 1.41
MRPS28-204ENST00000519120 FAM135BQ49AJ0 1406 aa23.88■■□□□ 1.41
MRPS28-204ENST00000519120 ADAMTS13Q76LX8 1427 aa23.88■■□□□ 1.41
MRPS28-204ENST00000519120 MED1Q15648 1581 aaPredicted RBP23.87■■□□□ 1.41
MRPS28-204ENST00000519120 NCOA3Q9Y6Q9 1424 aa23.85■■□□□ 1.41
MRPS28-204ENST00000519120 TRPM2O94759 1503 aa23.85■■□□□ 1.41
MRPS28-204ENST00000519120 MSH6P52701 1360 aa23.83■■□□□ 1.41
MRPS28-204ENST00000519120 SOCS7O14512 581 aa23.8■■□□□ 1.4
MRPS28-204ENST00000519120 SETBP1Q9Y6X0 1596 aa23.8■■□□□ 1.4
MRPS28-204ENST00000519120 CLTCL1P53675 1640 aa23.8■■□□□ 1.4
MRPS28-204ENST00000519120 NUTM2DQ5VT03 806 aaPredicted RBP23.78■■□□□ 1.4
MRPS28-204ENST00000519120 RBM33Q96EV2 1170 aaKnown RBP23.78■■□□□ 1.4
MRPS28-204ENST00000519120 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
MRPS28-204ENST00000519120 NRXN3Q9Y4C0 1643 aa23.76■■□□□ 1.39
MRPS28-204ENST00000519120 ROBO1Q9Y6N7 1651 aa23.76■■□□□ 1.39
MRPS28-204ENST00000519120 NEXMIFQ5QGS0 1516 aa23.74■■□□□ 1.39
MRPS28-204ENST00000519120 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
MRPS28-204ENST00000519120 TRIM52Q96A61 297 aa23.74■■□□□ 1.39
MRPS28-204ENST00000519120 SLC4A1APQ9BWU0 796 aaKnown RBP23.72■■□□□ 1.39
MRPS28-204ENST00000519120 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
MRPS28-204ENST00000519120 PTPRUQ92729 1446 aa23.72■■□□□ 1.39
MRPS28-204ENST00000519120 KIF1BO60333 1816 aa23.72■■□□□ 1.39
MRPS28-204ENST00000519120 XRN1Q8IZH2 1706 aaKnown RBP23.7■■□□□ 1.39
MRPS28-204ENST00000519120 AMOTL2Q9Y2J4 779 aa23.7■■□□□ 1.38
MRPS28-204ENST00000519120 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
MRPS28-204ENST00000519120 CADPS2Q86UW7 1296 aa23.68■■□□□ 1.38
MRPS28-204ENST00000519120 DCCP43146 1447 aa23.67■■□□□ 1.38
MRPS28-204ENST00000519120 ACIN1Q9UKV3 1341 aaKnown RBP23.66■■□□□ 1.38
MRPS28-204ENST00000519120 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
MRPS28-204ENST00000519120 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
MRPS28-204ENST00000519120 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.66■■□□□ 1.38
MRPS28-204ENST00000519120 RPGRIP1LQ68CZ1 1315 aa23.65■■□□□ 1.38
MRPS28-204ENST00000519120 METP08581 1390 aa23.65■■□□□ 1.38
MRPS28-204ENST00000519120 VGFO15240 615 aaPredicted RBP23.64■■□□□ 1.37
MRPS28-204ENST00000519120 ATF3P18847 181 aa23.63■■□□□ 1.37
MRPS28-204ENST00000519120 PHLPP1O60346 1717 aa23.6■■□□□ 1.37
MRPS28-204ENST00000519120 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
MRPS28-204ENST00000519120 COL16A1Q07092 1604 aaPredicted RBP23.58■■□□□ 1.36
MRPS28-204ENST00000519120 AHDC1Q5TGY3 1603 aaPredicted RBP23.58■■□□□ 1.36
MRPS28-204ENST00000519120 JCADQ9P266 1359 aa23.57■■□□□ 1.36
MRPS28-204ENST00000519120 CCDC144AA2RUR9 1427 aa23.57■■□□□ 1.36
MRPS28-204ENST00000519120 SETD1AO15047 1707 aaKnown RBP23.56■■□□□ 1.36
MRPS28-204ENST00000519120 PPLO60437 1756 aa23.56■■□□□ 1.36
MRPS28-204ENST00000519120 MPHOSPH9Q99550 1183 aa23.56■■□□□ 1.36
MRPS28-204ENST00000519120 PTCH1Q13635 1447 aa23.56■■□□□ 1.36
MRPS28-204ENST00000519120 ADGRL3Q9HAR2 1447 aa23.56■■□□□ 1.36
MRPS28-204ENST00000519120 MST1RQ04912 1400 aa23.52■■□□□ 1.36
MRPS28-204ENST00000519120 SPATA31E1Q6ZUB1 1445 aa23.52■■□□□ 1.36
MRPS28-204ENST00000519120 SETD5Q9C0A6 1442 aa23.52■■□□□ 1.36
MRPS28-204ENST00000519120 FOXD1Q16676 465 aa23.52■■□□□ 1.36
MRPS28-204ENST00000519120 BRINP3Q76B58 766 aa23.51■■□□□ 1.35
MRPS28-204ENST00000519120 RGS17Q9UGC6 210 aaPredicted RBP23.51■■□□□ 1.35
MRPS28-204ENST00000519120 NALCNQ8IZF0 1738 aa23.49■■□□□ 1.35
MRPS28-204ENST00000519120 ANKRD30BQ9BXX2 1392 aa23.49■■□□□ 1.35
MRPS28-204ENST00000519120 ASXL1Q8IXJ9 1541 aa23.49■■□□□ 1.35
MRPS28-204ENST00000519120 SPATA31A6Q5VVP1 1343 aa23.48■■□□□ 1.35
MRPS28-204ENST00000519120 SHPRHQ149N8 1683 aa23.46■■□□□ 1.35
MRPS28-204ENST00000519120 ROBO2Q9HCK4 1378 aa23.46■■□□□ 1.35
MRPS28-204ENST00000519120 IFT172Q9UG01 1749 aa23.45■■□□□ 1.34
MRPS28-204ENST00000519120 NHSL1Q5SYE7 1610 aa23.44■■□□□ 1.34
MRPS28-204ENST00000519120 ADGRF5Q8IZF2 1346 aa23.42■■□□□ 1.34
MRPS28-204ENST00000519120 RAB3GAP2Q9H2M9 1393 aa23.41■■□□□ 1.34
MRPS28-204ENST00000519120 RGL3Q3MIN7 710 aa23.41■■□□□ 1.34
MRPS28-204ENST00000519120 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
MRPS28-204ENST00000519120 TECPR2O15040 1411 aa23.4■■□□□ 1.34
MRPS28-204ENST00000519120 PIK3C2GO75747 1445 aa23.4■■□□□ 1.34
MRPS28-204ENST00000519120 LRP6O75581 1613 aa23.38■■□□□ 1.33
MRPS28-204ENST00000519120 LAMC1P11047 1609 aa23.37■■□□□ 1.33
MRPS28-204ENST00000519120 POTEAQ6S8J7 498 aa23.37■■□□□ 1.33
MRPS28-204ENST00000519120 LRRC59Q96AG4 307 aaKnown RBP23.36■■□□□ 1.33
MRPS28-204ENST00000519120 LRPPRCP42704 1394 aaKnown RBP23.36■■□□□ 1.33
MRPS28-204ENST00000519120 CDC42BPGQ6DT37 1551 aa23.35■■□□□ 1.33
MRPS28-204ENST00000519120 ABCC11Q96J66 1382 aa23.35■■□□□ 1.33
MRPS28-204ENST00000519120 MYOM2P54296 1465 aa23.35■■□□□ 1.33
MRPS28-204ENST00000519120 HRCP23327 699 aa23.34■■□□□ 1.33
MRPS28-204ENST00000519120 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
MRPS28-204ENST00000519120 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.33
MRPS28-204ENST00000519120 MEX3CQ5U5Q3 659 aaKnown RBP23.3■■□□□ 1.32
MRPS28-204ENST00000519120 ZNF772Q68DY9 489 aaPredicted RBP23.29■■□□□ 1.32
MRPS28-204ENST00000519120 SIRT1Q96EB6 747 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms