RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 RIMS2Q9UQ26 1411 aa21.18■□□□□ 0.98
BRD9-217ENST00000519112 HSPA1LP34931 641 aa21.17■□□□□ 0.98
BRD9-217ENST00000519112 SENP3Q9H4L4 574 aaPredicted RBP21.17■□□□□ 0.98
BRD9-217ENST00000519112 SPHKAPQ2M3C7 1700 aa21.16■□□□□ 0.98
BRD9-217ENST00000519112 DISP3Q9P2K9 1392 aa21.16■□□□□ 0.98
BRD9-217ENST00000519112 CHGAP10645 457 aaKnown RBP21.15■□□□□ 0.98
BRD9-217ENST00000519112 PLEKHG1Q9ULL1 1385 aa21.14■□□□□ 0.98
BRD9-217ENST00000519112 KCNA6P17658 529 aa21.14■□□□□ 0.97
BRD9-217ENST00000519112 NWD1Q149M9 1564 aa21.13■□□□□ 0.97
BRD9-217ENST00000519112 CHD2O14647 1828 aaKnown RBP21.13■□□□□ 0.97
BRD9-217ENST00000519112 NUTM2DQ5VT03 806 aaPredicted RBP21.12■□□□□ 0.97
BRD9-217ENST00000519112 BCANQ96GW7 911 aa21.11■□□□□ 0.97
BRD9-217ENST00000519112 HFM1A2PYH4 1435 aa21.11■□□□□ 0.97
BRD9-217ENST00000519112 TMEM94Q12767 1356 aa21.1■□□□□ 0.97
BRD9-217ENST00000519112 RBM33Q96EV2 1170 aaKnown RBP21.1■□□□□ 0.97
BRD9-217ENST00000519112 PPP1R15AO75807 674 aaPredicted RBP21.09■□□□□ 0.97
BRD9-217ENST00000519112 HDGFP51858 240 aaKnown RBP21.09■□□□□ 0.97
BRD9-217ENST00000519112 ILDR2Q71H61 639 aa21.09■□□□□ 0.97
BRD9-217ENST00000519112 ADAMTS13Q76LX8 1427 aa21.08■□□□□ 0.97
BRD9-217ENST00000519112 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
BRD9-217ENST00000519112 CLTCL1P53675 1640 aa21.07■□□□□ 0.96
BRD9-217ENST00000519112 NKTRP30414 1462 aaKnown RBP21.07■□□□□ 0.96
BRD9-217ENST00000519112 PROSER2Q86WR7 435 aaPredicted RBP21.06■□□□□ 0.96
BRD9-217ENST00000519112 TBX22Q9Y458 520 aa21.05■□□□□ 0.96
BRD9-217ENST00000519112 TRPM2O94759 1503 aa21.04■□□□□ 0.96
BRD9-217ENST00000519112 NRXN3Q9Y4C0 1643 aa21.03■□□□□ 0.96
BRD9-217ENST00000519112 TRIM52Q96A61 297 aa21.01■□□□□ 0.95
BRD9-217ENST00000519112 KIF1BO60333 1816 aa21.01■□□□□ 0.95
BRD9-217ENST00000519112 DIP2AQ14689 1571 aa21.01■□□□□ 0.95
BRD9-217ENST00000519112 MED1Q15648 1581 aaPredicted RBP20.99■□□□□ 0.95
BRD9-217ENST00000519112 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
BRD9-217ENST00000519112 FAM135BQ49AJ0 1406 aa20.97■□□□□ 0.95
BRD9-217ENST00000519112 PTPRUQ92729 1446 aa20.97■□□□□ 0.95
BRD9-217ENST00000519112 ZNF326Q5BKZ1 582 aaKnown RBP20.97■□□□□ 0.95
BRD9-217ENST00000519112 SETBP1Q9Y6X0 1596 aa20.97■□□□□ 0.95
BRD9-217ENST00000519112 ROBO1Q9Y6N7 1651 aa20.96■□□□□ 0.95
BRD9-217ENST00000519112 SLC4A1APQ9BWU0 796 aaKnown RBP20.96■□□□□ 0.95
BRD9-217ENST00000519112 PIK3R4Q99570 1358 aa20.96■□□□□ 0.95
BRD9-217ENST00000519112 MSH6P52701 1360 aa20.94■□□□□ 0.94
BRD9-217ENST00000519112 FOXD1Q16676 465 aa20.92■□□□□ 0.94
BRD9-217ENST00000519112 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
BRD9-217ENST00000519112 XRN1Q8IZH2 1706 aaKnown RBP20.91■□□□□ 0.94
BRD9-217ENST00000519112 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.91■□□□□ 0.94
BRD9-217ENST00000519112 NCOA3Q9Y6Q9 1424 aa20.91■□□□□ 0.94
BRD9-217ENST00000519112 METP08581 1390 aa20.9■□□□□ 0.94
BRD9-217ENST00000519112 SLAIN2Q9P270 581 aa20.89■□□□□ 0.93
BRD9-217ENST00000519112 SETD1AO15047 1707 aaKnown RBP20.87■□□□□ 0.93
BRD9-217ENST00000519112 PPLO60437 1756 aa20.87■□□□□ 0.93
BRD9-217ENST00000519112 MPHOSPH9Q99550 1183 aa20.86■□□□□ 0.93
BRD9-217ENST00000519112 SOCS7O14512 581 aa20.84■□□□□ 0.93
BRD9-217ENST00000519112 C14orf37Q86TY3 774 aa20.84■□□□□ 0.93
BRD9-217ENST00000519112 C19orf44Q9H6X5 657 aa20.84■□□□□ 0.93
BRD9-217ENST00000519112 PHLPP1O60346 1717 aa20.83■□□□□ 0.92
BRD9-217ENST00000519112 SETD5Q9C0A6 1442 aa20.81■□□□□ 0.92
BRD9-217ENST00000519112 RPGRIP1LQ68CZ1 1315 aa20.8■□□□□ 0.92
BRD9-217ENST00000519112 VGFO15240 615 aaPredicted RBP20.8■□□□□ 0.92
BRD9-217ENST00000519112 CADPS2Q86UW7 1296 aa20.8■□□□□ 0.92
BRD9-217ENST00000519112 SPATA31E1Q6ZUB1 1445 aa20.78■□□□□ 0.92
BRD9-217ENST00000519112 COL16A1Q07092 1604 aaPredicted RBP20.78■□□□□ 0.92
BRD9-217ENST00000519112 IFT172Q9UG01 1749 aa20.78■□□□□ 0.92
BRD9-217ENST00000519112 ATF3P18847 181 aa20.78■□□□□ 0.92
BRD9-217ENST00000519112 CCDC144AA2RUR9 1427 aa20.78■□□□□ 0.92
BRD9-217ENST00000519112 NALCNQ8IZF0 1738 aa20.77■□□□□ 0.92
BRD9-217ENST00000519112 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
BRD9-217ENST00000519112 RGS17Q9UGC6 210 aaPredicted RBP20.76■□□□□ 0.91
BRD9-217ENST00000519112 RAB3GAP2Q9H2M9 1393 aa20.75■□□□□ 0.91
BRD9-217ENST00000519112 DCCP43146 1447 aa20.75■□□□□ 0.91
BRD9-217ENST00000519112 ADGRF5Q8IZF2 1346 aa20.74■□□□□ 0.91
BRD9-217ENST00000519112 MST1RQ04912 1400 aa20.73■□□□□ 0.91
BRD9-217ENST00000519112 RGL3Q3MIN7 710 aa20.73■□□□□ 0.91
BRD9-217ENST00000519112 AHDC1Q5TGY3 1603 aaPredicted RBP20.73■□□□□ 0.91
BRD9-217ENST00000519112 ROBO2Q9HCK4 1378 aa20.72■□□□□ 0.91
BRD9-217ENST00000519112 ADGRL3Q9HAR2 1447 aa20.72■□□□□ 0.91
BRD9-217ENST00000519112 BRINP3Q76B58 766 aa20.72■□□□□ 0.91
BRD9-217ENST00000519112 PTCH1Q13635 1447 aa20.71■□□□□ 0.91
BRD9-217ENST00000519112 PRAG1Q86YV5 1406 aa20.7■□□□□ 0.9
BRD9-217ENST00000519112 JCADQ9P266 1359 aa20.7■□□□□ 0.9
BRD9-217ENST00000519112 ACIN1Q9UKV3 1341 aaKnown RBP20.69■□□□□ 0.9
BRD9-217ENST00000519112 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
BRD9-217ENST00000519112 NHSL1Q5SYE7 1610 aa20.67■□□□□ 0.9
BRD9-217ENST00000519112 ANKRD30BQ9BXX2 1392 aa20.66■□□□□ 0.9
BRD9-217ENST00000519112 SHPRHQ149N8 1683 aa20.66■□□□□ 0.9
BRD9-217ENST00000519112 PIK3C2GO75747 1445 aa20.64■□□□□ 0.89
BRD9-217ENST00000519112 LRP6O75581 1613 aa20.64■□□□□ 0.89
BRD9-217ENST00000519112 DDX17Q92841 729 aaKnown RBP20.63■□□□□ 0.89
BRD9-217ENST00000519112 C1orf167Q5SNV9 1468 aa20.62■□□□□ 0.89
BRD9-217ENST00000519112 TMEM132EQ6IEE7 984 aa20.62■□□□□ 0.89
BRD9-217ENST00000519112 POTEAQ6S8J7 498 aa20.62■□□□□ 0.89
BRD9-217ENST00000519112 KNDC1Q76NI1 1749 aa20.6■□□□□ 0.89
BRD9-217ENST00000519112 NRXN1Q9ULB1 1477 aa20.6■□□□□ 0.89
BRD9-217ENST00000519112 TECPR2O15040 1411 aa20.6■□□□□ 0.89
BRD9-217ENST00000519112 SPATA31A6Q5VVP1 1343 aa20.59■□□□□ 0.89
BRD9-217ENST00000519112 STK26Q9P289 416 aa20.59■□□□□ 0.89
BRD9-217ENST00000519112 LRPPRCP42704 1394 aaKnown RBP20.59■□□□□ 0.89
BRD9-217ENST00000519112 LAMC1P11047 1609 aa20.58■□□□□ 0.89
BRD9-217ENST00000519112 WAPLQ7Z5K2 1190 aa20.58■□□□□ 0.89
BRD9-217ENST00000519112 ORAI2Q96SN7 254 aa20.58■□□□□ 0.89
BRD9-217ENST00000519112 HRCP23327 699 aa20.57■□□□□ 0.88
BRD9-217ENST00000519112 ABCC11Q96J66 1382 aa20.57■□□□□ 0.88
BRD9-217ENST00000519112 MYOM2P54296 1465 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms