RNA–Protein interactions for RNA: ENST00000517752.5

CD74-204, Transcript of CD74 molecule, humanhuman

TSL 2

Gene CD74, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-204ENST00000517752 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.31■■□□□ 1.32
CD74-204ENST00000517752 ZNF335Q9H4Z2 1342 aaPredicted RBP23.31■■□□□ 1.32
CD74-204ENST00000517752 RIMS2Q9UQ26 1411 aa23.3■■□□□ 1.32
CD74-204ENST00000517752 HRCP23327 699 aa23.28■■□□□ 1.32
CD74-204ENST00000517752 MPHOSPH9Q99550 1183 aa23.28■■□□□ 1.32
CD74-204ENST00000517752 PPP1R15AO75807 674 aaPredicted RBP23.27■■□□□ 1.32
CD74-204ENST00000517752 FBXO41Q8TF61 875 aa23.27■■□□□ 1.32
CD74-204ENST00000517752 PLEKHG1Q9ULL1 1385 aa23.26■■□□□ 1.31
CD74-204ENST00000517752 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
CD74-204ENST00000517752 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
CD74-204ENST00000517752 ZNF326Q5BKZ1 582 aaKnown RBP23.21■■□□□ 1.31
CD74-204ENST00000517752 BCANQ96GW7 911 aa23.2■■□□□ 1.3
CD74-204ENST00000517752 STRCP1A6NGW2 1772 aa23.19■■□□□ 1.3
CD74-204ENST00000517752 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
CD74-204ENST00000517752 ILDR1Q86SU0 546 aaPredicted RBP23.17■■□□□ 1.3
CD74-204ENST00000517752 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
CD74-204ENST00000517752 FOXD1Q16676 465 aa23.15■■□□□ 1.3
CD74-204ENST00000517752 NWD1Q149M9 1564 aa23.14■■□□□ 1.3
CD74-204ENST00000517752 SETBP1Q9Y6X0 1596 aa23.14■■□□□ 1.3
CD74-204ENST00000517752 PPLO60437 1756 aa23.14■■□□□ 1.29
CD74-204ENST00000517752 CHD2O14647 1828 aaKnown RBP23.13■■□□□ 1.29
CD74-204ENST00000517752 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
CD74-204ENST00000517752 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
CD74-204ENST00000517752 TBX22Q9Y458 520 aa23.12■■□□□ 1.29
CD74-204ENST00000517752 PIK3R4Q99570 1358 aa23.12■■□□□ 1.29
CD74-204ENST00000517752 LRRC7Q96NW7 1537 aa23.11■■□□□ 1.29
CD74-204ENST00000517752 VGFO15240 615 aaPredicted RBP23.1■■□□□ 1.29
CD74-204ENST00000517752 KCNA6P17658 529 aa23.1■■□□□ 1.29
CD74-204ENST00000517752 ADAMTS13Q76LX8 1427 aa23.09■■□□□ 1.29
CD74-204ENST00000517752 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
CD74-204ENST00000517752 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
CD74-204ENST00000517752 IFT172Q9UG01 1749 aa23.08■■□□□ 1.28
CD74-204ENST00000517752 SPATA31E1Q6ZUB1 1445 aa23.07■■□□□ 1.28
CD74-204ENST00000517752 ANKRD30BQ9BXX2 1392 aa23.04■■□□□ 1.28
CD74-204ENST00000517752 XIRP1Q702N8 1843 aaKnown RBP23.04■■□□□ 1.28
CD74-204ENST00000517752 TRIM26Q12899 539 aaPredicted RBP23.03■■□□□ 1.28
CD74-204ENST00000517752 UBAP1LF5GYI3 381 aa23.02■■□□□ 1.28
CD74-204ENST00000517752 TOM1O60784 492 aa23.02■■□□□ 1.28
CD74-204ENST00000517752 SENP3Q9H4L4 574 aaPredicted RBP23.01■■□□□ 1.27
CD74-204ENST00000517752 PROSER2Q86WR7 435 aaPredicted RBP22.99■■□□□ 1.27
CD74-204ENST00000517752 XRN1Q8IZH2 1706 aaKnown RBP22.99■■□□□ 1.27
CD74-204ENST00000517752 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
CD74-204ENST00000517752 SETD1AO15047 1707 aaKnown RBP22.98■■□□□ 1.27
CD74-204ENST00000517752 TMEM94Q12767 1356 aa22.98■■□□□ 1.27
CD74-204ENST00000517752 NCOA3Q9Y6Q9 1424 aa22.98■■□□□ 1.27
CD74-204ENST00000517752 ALKQ9UM73 1620 aa22.97■■□□□ 1.27
CD74-204ENST00000517752 MYOM2P54296 1465 aa22.95■■□□□ 1.26
CD74-204ENST00000517752 LAMC1P11047 1609 aa22.94■■□□□ 1.26
CD74-204ENST00000517752 AMOTL2Q9Y2J4 779 aa22.93■■□□□ 1.26
CD74-204ENST00000517752 MSH6P52701 1360 aa22.92■■□□□ 1.26
CD74-204ENST00000517752 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
CD74-204ENST00000517752 METP08581 1390 aa22.91■■□□□ 1.26
CD74-204ENST00000517752 STAC3Q96MF2 364 aa22.91■■□□□ 1.26
CD74-204ENST00000517752 PIK3C2GO75747 1445 aa22.91■■□□□ 1.26
CD74-204ENST00000517752 ADGRF5Q8IZF2 1346 aa22.88■■□□□ 1.25
CD74-204ENST00000517752 NRXN1Q9ULB1 1477 aa22.88■■□□□ 1.25
CD74-204ENST00000517752 PRAG1Q86YV5 1406 aa22.88■■□□□ 1.25
CD74-204ENST00000517752 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
CD74-204ENST00000517752 PTCH1Q13635 1447 aa22.87■■□□□ 1.25
CD74-204ENST00000517752 C14orf37Q86TY3 774 aa22.86■■□□□ 1.25
CD74-204ENST00000517752 PIP4K2BP78356 416 aa22.85■■□□□ 1.25
CD74-204ENST00000517752 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.84■■□□□ 1.25
CD74-204ENST00000517752 DCCP43146 1447 aa22.83■■□□□ 1.25
CD74-204ENST00000517752 KNDC1Q76NI1 1749 aa22.83■■□□□ 1.25
CD74-204ENST00000517752 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
CD74-204ENST00000517752 RBM33Q96EV2 1170 aaKnown RBP22.81■■□□□ 1.24
CD74-204ENST00000517752 CADPS2Q86UW7 1296 aa22.8■■□□□ 1.24
CD74-204ENST00000517752 DCAF11Q8TEB1 546 aa22.79■■□□□ 1.24
CD74-204ENST00000517752 DHX57Q6P158 1386 aaKnown RBP22.78■■□□□ 1.24
CD74-204ENST00000517752 TECPR2O15040 1411 aa22.78■■□□□ 1.24
CD74-204ENST00000517752 ATF3P18847 181 aa22.78■■□□□ 1.24
CD74-204ENST00000517752 FAM135BQ49AJ0 1406 aa22.78■■□□□ 1.24
CD74-204ENST00000517752 NALCNQ8IZF0 1738 aa22.78■■□□□ 1.24
CD74-204ENST00000517752 C14orf93Q9H972 538 aaKnown RBP22.78■■□□□ 1.24
CD74-204ENST00000517752 ADGRL3Q9HAR2 1447 aa22.78■■□□□ 1.24
CD74-204ENST00000517752 ROBO1Q9Y6N7 1651 aa22.77■■□□□ 1.24
CD74-204ENST00000517752 ASXL1Q8IXJ9 1541 aa22.77■■□□□ 1.24
CD74-204ENST00000517752 LRPPRCP42704 1394 aaKnown RBP22.76■■□□□ 1.23
CD74-204ENST00000517752 ABCC11Q96J66 1382 aa22.75■■□□□ 1.23
CD74-204ENST00000517752 ROBO2Q9HCK4 1378 aa22.75■■□□□ 1.23
CD74-204ENST00000517752 YTHDC2Q9H6S0 1430 aaKnown RBP22.74■■□□□ 1.23
CD74-204ENST00000517752 SLAIN2Q9P270 581 aa22.74■■□□□ 1.23
CD74-204ENST00000517752 KDM2AQ9Y2K7 1162 aa22.73■■□□□ 1.23
CD74-204ENST00000517752 KIAA1210Q9ULL0 1709 aa22.73■■□□□ 1.23
CD74-204ENST00000517752 CFAP70Q5T0N1 1121 aa22.71■■□□□ 1.23
CD74-204ENST00000517752 HSPA1LP34931 641 aa22.7■■□□□ 1.22
CD74-204ENST00000517752 TMEM132EQ6IEE7 984 aa22.69■■□□□ 1.22
CD74-204ENST00000517752 ADGRB1O14514 1584 aa22.68■■□□□ 1.22
CD74-204ENST00000517752 CDC42BPGQ6DT37 1551 aa22.68■■□□□ 1.22
CD74-204ENST00000517752 DLC1Q96QB1 1528 aa22.68■■□□□ 1.22
CD74-204ENST00000517752 SIRT1Q96EB6 747 aa22.68■■□□□ 1.22
CD74-204ENST00000517752 STK26Q9P289 416 aa22.68■■□□□ 1.22
CD74-204ENST00000517752 MST1RQ04912 1400 aa22.65■■□□□ 1.22
CD74-204ENST00000517752 PHLPP1O60346 1717 aa22.65■■□□□ 1.22
CD74-204ENST00000517752 AHDC1Q5TGY3 1603 aaPredicted RBP22.62■■□□□ 1.21
CD74-204ENST00000517752 SIN3AQ96ST3 1273 aa22.62■■□□□ 1.21
CD74-204ENST00000517752 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
CD74-204ENST00000517752 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
CD74-204ENST00000517752 ARHGEF28Q8N1W1 1705 aaKnown RBP22.59■■□□□ 1.21
CD74-204ENST00000517752 NHSL1Q5SYE7 1610 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms