RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
SCARNA20-201ENST00000516768 PPP1R15AO75807 674 aaPredicted RBP16.47■□□□□ 0.23
SCARNA20-201ENST00000516768 BCANQ96GW7 911 aa16.47■□□□□ 0.23
SCARNA20-201ENST00000516768 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
SCARNA20-201ENST00000516768 TRPM2O94759 1503 aa16.46■□□□□ 0.23
SCARNA20-201ENST00000516768 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
SCARNA20-201ENST00000516768 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
SCARNA20-201ENST00000516768 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
SCARNA20-201ENST00000516768 TBX22Q9Y458 520 aa16.45■□□□□ 0.22
SCARNA20-201ENST00000516768 PLEKHG1Q9ULL1 1385 aa16.45■□□□□ 0.22
SCARNA20-201ENST00000516768 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
SCARNA20-201ENST00000516768 RPGRIP1LQ68CZ1 1315 aa16.44■□□□□ 0.22
SCARNA20-201ENST00000516768 MYO5BQ9ULV0 1848 aa16.43■□□□□ 0.22
SCARNA20-201ENST00000516768 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
SCARNA20-201ENST00000516768 CLTCL1P53675 1640 aa16.42■□□□□ 0.22
SCARNA20-201ENST00000516768 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
SCARNA20-201ENST00000516768 KCNA6P17658 529 aa16.42■□□□□ 0.22
SCARNA20-201ENST00000516768 CCDC144AA2RUR9 1427 aa16.42■□□□□ 0.22
SCARNA20-201ENST00000516768 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
SCARNA20-201ENST00000516768 ANKRD30BQ9BXX2 1392 aa16.39■□□□□ 0.21
SCARNA20-201ENST00000516768 CPS1P31327 1500 aa16.38■□□□□ 0.21
SCARNA20-201ENST00000516768 IQSEC2Q5JU85 1478 aa16.37■□□□□ 0.21
SCARNA20-201ENST00000516768 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
SCARNA20-201ENST00000516768 KIF1BO60333 1816 aa16.36■□□□□ 0.21
SCARNA20-201ENST00000516768 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
SCARNA20-201ENST00000516768 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
SCARNA20-201ENST00000516768 PIK3R4Q99570 1358 aa16.33■□□□□ 0.2
SCARNA20-201ENST00000516768 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.2
SCARNA20-201ENST00000516768 LRRC7Q96NW7 1537 aa16.33■□□□□ 0.2
SCARNA20-201ENST00000516768 STRCP1A6NGW2 1772 aa16.32■□□□□ 0.2
SCARNA20-201ENST00000516768 UBAP1LF5GYI3 381 aa16.32■□□□□ 0.2
SCARNA20-201ENST00000516768 AMOTL2Q9Y2J4 779 aa16.32■□□□□ 0.2
SCARNA20-201ENST00000516768 ADGRF5Q8IZF2 1346 aa16.31■□□□□ 0.2
SCARNA20-201ENST00000516768 TOM1O60784 492 aa16.31■□□□□ 0.2
SCARNA20-201ENST00000516768 METP08581 1390 aa16.29■□□□□ 0.2
SCARNA20-201ENST00000516768 RBM33Q96EV2 1170 aaKnown RBP16.29■□□□□ 0.2
SCARNA20-201ENST00000516768 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
SCARNA20-201ENST00000516768 STAC3Q96MF2 364 aa16.28■□□□□ 0.2
SCARNA20-201ENST00000516768 TMEM94Q12767 1356 aa16.27■□□□□ 0.2
SCARNA20-201ENST00000516768 PTPRUQ92729 1446 aa16.27■□□□□ 0.19
SCARNA20-201ENST00000516768 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
SCARNA20-201ENST00000516768 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
SCARNA20-201ENST00000516768 DCAF11Q8TEB1 546 aa16.25■□□□□ 0.19
SCARNA20-201ENST00000516768 NRXN3Q9Y4C0 1643 aa16.25■□□□□ 0.19
SCARNA20-201ENST00000516768 NKTRP30414 1462 aaKnown RBP16.24■□□□□ 0.19
SCARNA20-201ENST00000516768 C14orf93Q9H972 538 aaKnown RBP16.24■□□□□ 0.19
SCARNA20-201ENST00000516768 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
SCARNA20-201ENST00000516768 PPLO60437 1756 aa16.23■□□□□ 0.19
SCARNA20-201ENST00000516768 NWD1Q149M9 1564 aa16.23■□□□□ 0.19
SCARNA20-201ENST00000516768 KDM2AQ9Y2K7 1162 aa16.23■□□□□ 0.19
SCARNA20-201ENST00000516768 PIP4K2BP78356 416 aa16.22■□□□□ 0.19
SCARNA20-201ENST00000516768 C19orf44Q9H6X5 657 aa16.22■□□□□ 0.19
SCARNA20-201ENST00000516768 ALKQ9UM73 1620 aa16.22■□□□□ 0.19
SCARNA20-201ENST00000516768 DHX57Q6P158 1386 aaKnown RBP16.21■□□□□ 0.19
SCARNA20-201ENST00000516768 CFAP70Q5T0N1 1121 aa16.2■□□□□ 0.18
SCARNA20-201ENST00000516768 TMEM132EQ6IEE7 984 aa16.2■□□□□ 0.18
SCARNA20-201ENST00000516768 SIN3AQ96ST3 1273 aa16.2■□□□□ 0.18
SCARNA20-201ENST00000516768 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
SCARNA20-201ENST00000516768 PCGF6Q9BYE7 350 aa16.19■□□□□ 0.18
SCARNA20-201ENST00000516768 NRXN1Q9ULB1 1477 aa16.18■□□□□ 0.18
SCARNA20-201ENST00000516768 MSH6P52701 1360 aa16.18■□□□□ 0.18
SCARNA20-201ENST00000516768 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
SCARNA20-201ENST00000516768 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
SCARNA20-201ENST00000516768 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
SCARNA20-201ENST00000516768 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
SCARNA20-201ENST00000516768 MYOM2P54296 1465 aa16.17■□□□□ 0.18
SCARNA20-201ENST00000516768 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
SCARNA20-201ENST00000516768 NEUROD1Q13562 356 aa16.16■□□□□ 0.18
SCARNA20-201ENST00000516768 CADPS2Q86UW7 1296 aa16.16■□□□□ 0.18
SCARNA20-201ENST00000516768 STK26Q9P289 416 aa16.16■□□□□ 0.18
SCARNA20-201ENST00000516768 ABCC11Q96J66 1382 aa16.15■□□□□ 0.18
SCARNA20-201ENST00000516768 ATF3P18847 181 aa16.15■□□□□ 0.18
SCARNA20-201ENST00000516768 SIRT1Q96EB6 747 aa16.15■□□□□ 0.18
SCARNA20-201ENST00000516768 ROBO2Q9HCK4 1378 aa16.14■□□□□ 0.17
SCARNA20-201ENST00000516768 L3MBTL2Q969R5 705 aa16.14■□□□□ 0.17
SCARNA20-201ENST00000516768 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
SCARNA20-201ENST00000516768 FAM135BQ49AJ0 1406 aa16.13■□□□□ 0.17
SCARNA20-201ENST00000516768 SETD1AO15047 1707 aaKnown RBP16.13■□□□□ 0.17
SCARNA20-201ENST00000516768 XRN1Q8IZH2 1706 aaKnown RBP16.13■□□□□ 0.17
SCARNA20-201ENST00000516768 PRAG1Q86YV5 1406 aa16.12■□□□□ 0.17
SCARNA20-201ENST00000516768 HSPA1LP34931 641 aa16.12■□□□□ 0.17
SCARNA20-201ENST00000516768 WAPLQ7Z5K2 1190 aa16.12■□□□□ 0.17
SCARNA20-201ENST00000516768 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
SCARNA20-201ENST00000516768 YTHDC2Q9H6S0 1430 aaKnown RBP16.1■□□□□ 0.17
SCARNA20-201ENST00000516768 TECPR2O15040 1411 aa16.09■□□□□ 0.17
SCARNA20-201ENST00000516768 DCCP43146 1447 aa16.08■□□□□ 0.16
SCARNA20-201ENST00000516768 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.06■□□□□ 0.16
SCARNA20-201ENST00000516768 ASXL1Q8IXJ9 1541 aa16.06■□□□□ 0.16
SCARNA20-201ENST00000516768 ADGRL3Q9HAR2 1447 aa16.06■□□□□ 0.16
SCARNA20-201ENST00000516768 TRAK1Q9UPV9 953 aa16.06■□□□□ 0.16
SCARNA20-201ENST00000516768 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
SCARNA20-201ENST00000516768 PRAM1Q96QH2 718 aa16.05■□□□□ 0.16
SCARNA20-201ENST00000516768 PLEKHH1Q9ULM0 1364 aa16.04■□□□□ 0.16
SCARNA20-201ENST00000516768 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
SCARNA20-201ENST00000516768 POGKQ9P215 609 aa16.03■□□□□ 0.16
SCARNA20-201ENST00000516768 LAMC1P11047 1609 aa16.03■□□□□ 0.16
SCARNA20-201ENST00000516768 ADGRB1O14514 1584 aa16.03■□□□□ 0.16
SCARNA20-201ENST00000516768 MST1RQ04912 1400 aa16.02■□□□□ 0.15
SCARNA20-201ENST00000516768 SAFB2Q14151 953 aaKnown RBP eCLIP16■□□□□ 0.15
SCARNA20-201ENST00000516768 CLSPNQ9HAW4 1339 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms