RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-280	ENST00000515881	HFM1	A2PYH4	1435 aa		29.57	■■■□□ 2.32
DDR1-280	ENST00000515881	ALK	Q9UM73	1620 aa		29.56	■■■□□ 2.32
DDR1-280	ENST00000515881	PLEKHG1	Q9ULL1	1385 aa		29.56	■■■□□ 2.32
DDR1-280	ENST00000515881	PPP1R15A	O75807	674 aa	Predicted RBP	29.56	■■■□□ 2.32
DDR1-280	ENST00000515881	BCAN	Q96GW7	911 aa		29.56	■■■□□ 2.32
DDR1-280	ENST00000515881	KCNA6	P17658	529 aa		29.54	■■■□□ 2.32
DDR1-280	ENST00000515881	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.54	■■■□□ 2.32
DDR1-280	ENST00000515881	MYO5B	Q9ULV0	1848 aa		29.53	■■■□□ 2.32
DDR1-280	ENST00000515881	SENP3	Q9H4L4	574 aa	Predicted RBP	29.5	■■■□□ 2.31
DDR1-280	ENST00000515881	HSPA1L	P34931	641 aa		29.49	■■■□□ 2.31
DDR1-280	ENST00000515881	DISP3	Q9P2K9	1392 aa		29.49	■■■□□ 2.31
DDR1-280	ENST00000515881	SPHKAP	Q2M3C7	1700 aa		29.47	■■■□□ 2.31
DDR1-280	ENST00000515881	TMEM94	Q12767	1356 aa		29.47	■■■□□ 2.31
DDR1-280	ENST00000515881	NWD1	Q149M9	1564 aa		29.47	■■■□□ 2.31
DDR1-280	ENST00000515881	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.46	■■■□□ 2.31
DDR1-280	ENST00000515881	NKTR	P30414	1462 aa	Known RBP	29.46	■■■□□ 2.31
DDR1-280	ENST00000515881	TRIM52	Q96A61	297 aa		29.45	■■■□□ 2.31
DDR1-280	ENST00000515881	PROSER2	Q86WR7	435 aa	Predicted RBP	29.44	■■■□□ 2.3
DDR1-280	ENST00000515881	TBX22	Q9Y458	520 aa		29.44	■■■□□ 2.3
DDR1-280	ENST00000515881	XIRP1	Q702N8	1843 aa	Known RBP	29.42	■■■□□ 2.3
DDR1-280	ENST00000515881	TRPM2	O94759	1503 aa		29.41	■■■□□ 2.3
DDR1-280	ENST00000515881	ADAMTS13	Q76LX8	1427 aa		29.41	■■■□□ 2.3
DDR1-280	ENST00000515881	RBM33	Q96EV2	1170 aa	Known RBP	29.38	■■■□□ 2.29
DDR1-280	ENST00000515881	DIP2A	Q14689	1571 aa		29.38	■■■□□ 2.29
DDR1-280	ENST00000515881	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.37	■■■□□ 2.29
DDR1-280	ENST00000515881	CLTCL1	P53675	1640 aa		29.37	■■■□□ 2.29
DDR1-280	ENST00000515881	ZNF326	Q5BKZ1	582 aa	Known RBP	29.36	■■■□□ 2.29
DDR1-280	ENST00000515881	PIK3R4	Q99570	1358 aa		29.33	■■■□□ 2.29
DDR1-280	ENST00000515881	CHD2	O14647	1828 aa	Known RBP	29.32	■■■□□ 2.28
DDR1-280	ENST00000515881	MSH6	P52701	1360 aa		29.29	■■■□□ 2.28
DDR1-280	ENST00000515881	FAM135B	Q49AJ0	1406 aa		29.28	■■■□□ 2.28
DDR1-280	ENST00000515881	SETBP1	Q9Y6X0	1596 aa		29.28	■■■□□ 2.28
DDR1-280	ENST00000515881	NEXMIF	Q5QGS0	1516 aa		29.27	■■■□□ 2.28
DDR1-280	ENST00000515881	NRXN3	Q9Y4C0	1643 aa		29.25	■■■□□ 2.27
DDR1-280	ENST00000515881	ILDR2	Q71H61	639 aa		29.25	■■■□□ 2.27
DDR1-280	ENST00000515881	NCOA3	Q9Y6Q9	1424 aa		29.25	■■■□□ 2.27
DDR1-280	ENST00000515881	PTPRU	Q92729	1446 aa		29.24	■■■□□ 2.27
DDR1-280	ENST00000515881	AMOTL2	Q9Y2J4	779 aa		29.23	■■■□□ 2.27
DDR1-280	ENST00000515881	MED1	Q15648	1581 aa	Predicted RBP	29.22	■■■□□ 2.27
DDR1-280	ENST00000515881	FOXD1	Q16676	465 aa		29.21	■■■□□ 2.27
DDR1-280	ENST00000515881	KIF1B	O60333	1816 aa		29.2	■■■□□ 2.27
DDR1-280	ENST00000515881	C14orf37	Q86TY3	774 aa		29.19	■■■□□ 2.26
DDR1-280	ENST00000515881	MPHOSPH9	Q99550	1183 aa		29.19	■■■□□ 2.26
DDR1-280	ENST00000515881	SLAIN2	Q9P270	581 aa		29.18	■■■□□ 2.26
DDR1-280	ENST00000515881	MET	P08581	1390 aa		29.17	■■■□□ 2.26
DDR1-280	ENST00000515881	ROBO1	Q9Y6N7	1651 aa		29.16	■■■□□ 2.26
DDR1-280	ENST00000515881	SETD5	Q9C0A6	1442 aa		29.16	■■■□□ 2.26
DDR1-280	ENST00000515881	RPGRIP1L	Q68CZ1	1315 aa		29.16	■■■□□ 2.26
DDR1-280	ENST00000515881	VGF	O15240	615 aa	Predicted RBP	29.15	■■■□□ 2.26
DDR1-280	ENST00000515881	ACIN1	Q9UKV3	1341 aa	Known RBP	29.15	■■■□□ 2.26
DDR1-280	ENST00000515881	XRN1	Q8IZH2	1706 aa	Known RBP	29.14	■■■□□ 2.26
DDR1-280	ENST00000515881	C19orf44	Q9H6X5	657 aa		29.14	■■■□□ 2.26
DDR1-280	ENST00000515881	CCDC144A	A2RUR9	1427 aa		29.13	■■■□□ 2.25
DDR1-280	ENST00000515881	CADPS2	Q86UW7	1296 aa		29.11	■■■□□ 2.25
DDR1-280	ENST00000515881	ATF3	P18847	181 aa		29.09	■■■□□ 2.25
DDR1-280	ENST00000515881	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.07	■■■□□ 2.24
DDR1-280	ENST00000515881	RAB3GAP2	Q9H2M9	1393 aa		29.05	■■■□□ 2.24
DDR1-280	ENST00000515881	DCC	P43146	1447 aa		29.04	■■■□□ 2.24
DDR1-280	ENST00000515881	SPATA31E1	Q6ZUB1	1445 aa		29.04	■■■□□ 2.24
DDR1-280	ENST00000515881	PHF23	Q9BUL5	403 aa	Predicted RBP	29.03	■■■□□ 2.24
DDR1-280	ENST00000515881	PPL	O60437	1756 aa		29.03	■■■□□ 2.24
DDR1-280	ENST00000515881	SOCS7	O14512	581 aa		29.01	■■■□□ 2.23
DDR1-280	ENST00000515881	RGL3	Q3MIN7	710 aa		29	■■■□□ 2.23
DDR1-280	ENST00000515881	SETD1A	O15047	1707 aa	Known RBP	29	■■■□□ 2.23
DDR1-280	ENST00000515881	PTCH1	Q13635	1447 aa		28.98	■■■□□ 2.23
DDR1-280	ENST00000515881	ADGRL3	Q9HAR2	1447 aa		28.98	■■■□□ 2.23
DDR1-280	ENST00000515881	ANKRD30B	Q9BXX2	1392 aa		28.97	■■■□□ 2.23
DDR1-280	ENST00000515881	ADGRF5	Q8IZF2	1346 aa		28.96	■■■□□ 2.23
DDR1-280	ENST00000515881	PRAG1	Q86YV5	1406 aa		28.96	■■■□□ 2.23
DDR1-280	ENST00000515881	PHLPP1	O60346	1717 aa		28.96	■■■□□ 2.23
DDR1-280	ENST00000515881	ROBO2	Q9HCK4	1378 aa		28.95	■■■□□ 2.22
DDR1-280	ENST00000515881	BRINP3	Q76B58	766 aa		28.94	■■■□□ 2.22
DDR1-280	ENST00000515881	MST1R	Q04912	1400 aa		28.94	■■■□□ 2.22
DDR1-280	ENST00000515881	JCAD	Q9P266	1359 aa		28.93	■■■□□ 2.22
DDR1-280	ENST00000515881	COL16A1	Q07092	1604 aa	Predicted RBP	28.92	■■■□□ 2.22
DDR1-280	ENST00000515881	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.92	■■■□□ 2.22
DDR1-280	ENST00000515881	NALCN	Q8IZF0	1738 aa		28.89	■■■□□ 2.22
DDR1-280	ENST00000515881	IFT172	Q9UG01	1749 aa		28.89	■■■□□ 2.22
DDR1-280	ENST00000515881	ASXL1	Q8IXJ9	1541 aa		28.88	■■■□□ 2.21
DDR1-280	ENST00000515881	PIK3C2G	O75747	1445 aa		28.86	■■■□□ 2.21
DDR1-280	ENST00000515881	HRC	P23327	699 aa		28.86	■■■□□ 2.21
DDR1-280	ENST00000515881	RGS17	Q9UGC6	210 aa	Predicted RBP	28.85	■■■□□ 2.21
DDR1-280	ENST00000515881	LRPPRC	P42704	1394 aa	Known RBP	28.81	■■■□□ 2.2
DDR1-280	ENST00000515881	TECPR2	O15040	1411 aa		28.8	■■■□□ 2.2
DDR1-280	ENST00000515881	MYOM2	P54296	1465 aa		28.79	■■■□□ 2.2
DDR1-280	ENST00000515881	C1orf167	Q5SNV9	1468 aa		28.79	■■■□□ 2.2
DDR1-280	ENST00000515881	SPATA31A6	Q5VVP1	1343 aa		28.79	■■■□□ 2.2
DDR1-280	ENST00000515881	STK26	Q9P289	416 aa		28.79	■■■□□ 2.2
DDR1-280	ENST00000515881	NRXN1	Q9ULB1	1477 aa		28.78	■■■□□ 2.2
DDR1-280	ENST00000515881	TMEM132E	Q6IEE7	984 aa		28.78	■■■□□ 2.2
DDR1-280	ENST00000515881	ABCC11	Q96J66	1382 aa		28.77	■■■□□ 2.2
DDR1-280	ENST00000515881	NHSL1	Q5SYE7	1610 aa		28.76	■■■□□ 2.19
DDR1-280	ENST00000515881	C14orf93	Q9H972	538 aa	Known RBP	28.75	■■■□□ 2.19
DDR1-280	ENST00000515881	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.74	■■■□□ 2.19
DDR1-280	ENST00000515881	SHPRH	Q149N8	1683 aa		28.74	■■■□□ 2.19
DDR1-280	ENST00000515881	LRP6	O75581	1613 aa		28.73	■■■□□ 2.19
DDR1-280	ENST00000515881	DDX17	Q92841	729 aa	Known RBP	28.73	■■■□□ 2.19
DDR1-280	ENST00000515881	CDC42BPG	Q6DT37	1551 aa		28.72	■■■□□ 2.19
DDR1-280	ENST00000515881	WAPL	Q7Z5K2	1190 aa		28.72	■■■□□ 2.19
DDR1-280	ENST00000515881	CFAP70	Q5T0N1	1121 aa		28.71	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms