RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 NRXN3Q9Y4C0 1643 aa18.3■□□□□ 0.52
SDHA-219ENST00000515815 PPLO60437 1756 aa18.28■□□□□ 0.52
SDHA-219ENST00000515815 IDI1Q13907 227 aa18.28■□□□□ 0.52
SDHA-219ENST00000515815 SLC52A1Q9NWF4 448 aa18.28■□□□□ 0.52
SDHA-219ENST00000515815 RIMS2Q9UQ26 1411 aa18.27■□□□□ 0.52
SDHA-219ENST00000515815 TXNDC2Q86VQ3 553 aa18.27■□□□□ 0.52
SDHA-219ENST00000515815 IFT172Q9UG01 1749 aa18.26■□□□□ 0.51
SDHA-219ENST00000515815 UBAP1LF5GYI3 381 aa18.26■□□□□ 0.51
SDHA-219ENST00000515815 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
SDHA-219ENST00000515815 LTKP29376 864 aa18.25■□□□□ 0.51
SDHA-219ENST00000515815 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
SDHA-219ENST00000515815 NEXMIFQ5QGS0 1516 aa18.24■□□□□ 0.51
SDHA-219ENST00000515815 SETD1AO15047 1707 aaKnown RBP18.24■□□□□ 0.51
SDHA-219ENST00000515815 PLEKHG1Q9ULL1 1385 aa18.24■□□□□ 0.51
SDHA-219ENST00000515815 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
SDHA-219ENST00000515815 PPP1R15AO75807 674 aaPredicted RBP18.19■□□□□ 0.5
SDHA-219ENST00000515815 MED1Q15648 1581 aaPredicted RBP18.19■□□□□ 0.5
SDHA-219ENST00000515815 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
SDHA-219ENST00000515815 TOM1O60784 492 aa18.17■□□□□ 0.5
SDHA-219ENST00000515815 CHGAP10645 457 aaKnown RBP18.17■□□□□ 0.5
SDHA-219ENST00000515815 NALCNQ8IZF0 1738 aa18.17■□□□□ 0.5
SDHA-219ENST00000515815 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.16■□□□□ 0.5
SDHA-219ENST00000515815 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
SDHA-219ENST00000515815 ADAMTS13Q76LX8 1427 aa18.15■□□□□ 0.5
SDHA-219ENST00000515815 BCANQ96GW7 911 aa18.13■□□□□ 0.49
SDHA-219ENST00000515815 HDGFP51858 240 aaKnown RBP18.12■□□□□ 0.49
SDHA-219ENST00000515815 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
SDHA-219ENST00000515815 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
SDHA-219ENST00000515815 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
SDHA-219ENST00000515815 TMEM94Q12767 1356 aa18.12■□□□□ 0.49
SDHA-219ENST00000515815 KNDC1Q76NI1 1749 aa18.1■□□□□ 0.49
SDHA-219ENST00000515815 LAMC1P11047 1609 aa18.1■□□□□ 0.49
SDHA-219ENST00000515815 PIK3R4Q99570 1358 aa18.09■□□□□ 0.49
SDHA-219ENST00000515815 TRIM52Q96A61 297 aa18.09■□□□□ 0.49
SDHA-219ENST00000515815 DISP3Q9P2K9 1392 aa18.08■□□□□ 0.49
SDHA-219ENST00000515815 KCNA6P17658 529 aa18.08■□□□□ 0.48
SDHA-219ENST00000515815 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
SDHA-219ENST00000515815 MSH6P52701 1360 aa18.07■□□□□ 0.48
SDHA-219ENST00000515815 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
SDHA-219ENST00000515815 NUTM2DQ5VT03 806 aaPredicted RBP18.05■□□□□ 0.48
SDHA-219ENST00000515815 ZNF326Q5BKZ1 582 aaKnown RBP18.04■□□□□ 0.48
SDHA-219ENST00000515815 SLC4A1APQ9BWU0 796 aaKnown RBP18.04■□□□□ 0.48
SDHA-219ENST00000515815 COL16A1Q07092 1604 aaPredicted RBP18.04■□□□□ 0.48
SDHA-219ENST00000515815 NHSL1Q5SYE7 1610 aa18.04■□□□□ 0.48
SDHA-219ENST00000515815 HSPA1LP34931 641 aa18.03■□□□□ 0.48
SDHA-219ENST00000515815 NCOA3Q9Y6Q9 1424 aa18.02■□□□□ 0.48
SDHA-219ENST00000515815 SHPRHQ149N8 1683 aa18.02■□□□□ 0.47
SDHA-219ENST00000515815 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
SDHA-219ENST00000515815 SETD5Q9C0A6 1442 aa18.01■□□□□ 0.47
SDHA-219ENST00000515815 PROSER2Q86WR7 435 aaPredicted RBP18.01■□□□□ 0.47
SDHA-219ENST00000515815 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
SDHA-219ENST00000515815 TBX22Q9Y458 520 aa18■□□□□ 0.47
SDHA-219ENST00000515815 DCCP43146 1447 aa17.99■□□□□ 0.47
SDHA-219ENST00000515815 PTCH1Q13635 1447 aa17.98■□□□□ 0.47
SDHA-219ENST00000515815 FAM135BQ49AJ0 1406 aa17.98■□□□□ 0.47
SDHA-219ENST00000515815 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
SDHA-219ENST00000515815 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
SDHA-219ENST00000515815 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
SDHA-219ENST00000515815 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
SDHA-219ENST00000515815 ASXL1Q8IXJ9 1541 aa17.95■□□□□ 0.46
SDHA-219ENST00000515815 SPATA31E1Q6ZUB1 1445 aa17.95■□□□□ 0.46
SDHA-219ENST00000515815 ADGRL3Q9HAR2 1447 aa17.95■□□□□ 0.46
SDHA-219ENST00000515815 CDC42BPGQ6DT37 1551 aa17.95■□□□□ 0.46
SDHA-219ENST00000515815 C14orf37Q86TY3 774 aa17.94■□□□□ 0.46
SDHA-219ENST00000515815 MYOM2P54296 1465 aa17.94■□□□□ 0.46
SDHA-219ENST00000515815 METP08581 1390 aa17.93■□□□□ 0.46
SDHA-219ENST00000515815 FOXD1Q16676 465 aa17.91■□□□□ 0.46
SDHA-219ENST00000515815 FMN2Q9NZ56 1722 aa17.9■□□□□ 0.46
SDHA-219ENST00000515815 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
SDHA-219ENST00000515815 RPGRIP1LQ68CZ1 1315 aa17.9■□□□□ 0.46
SDHA-219ENST00000515815 PIK3C2GO75747 1445 aa17.89■□□□□ 0.46
SDHA-219ENST00000515815 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
SDHA-219ENST00000515815 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
SDHA-219ENST00000515815 MST1RQ04912 1400 aa17.88■□□□□ 0.45
SDHA-219ENST00000515815 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
SDHA-219ENST00000515815 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
SDHA-219ENST00000515815 CADPS2Q86UW7 1296 aa17.85■□□□□ 0.45
SDHA-219ENST00000515815 NRXN1Q9ULB1 1477 aa17.85■□□□□ 0.45
SDHA-219ENST00000515815 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
SDHA-219ENST00000515815 ATF3P18847 181 aa17.84■□□□□ 0.45
SDHA-219ENST00000515815 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
SDHA-219ENST00000515815 ARHGEF28Q8N1W1 1705 aaKnown RBP17.84■□□□□ 0.45
SDHA-219ENST00000515815 TECPR2O15040 1411 aa17.83■□□□□ 0.45
SDHA-219ENST00000515815 MARF1Q9Y4F3 1742 aaKnown RBP17.83■□□□□ 0.44
SDHA-219ENST00000515815 C19orf44Q9H6X5 657 aa17.82■□□□□ 0.44
SDHA-219ENST00000515815 SLAIN2Q9P270 581 aa17.82■□□□□ 0.44
SDHA-219ENST00000515815 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
SDHA-219ENST00000515815 ROBO2Q9HCK4 1378 aa17.81■□□□□ 0.44
SDHA-219ENST00000515815 JCADQ9P266 1359 aa17.8■□□□□ 0.44
SDHA-219ENST00000515815 ADGRB2O60241 1585 aa17.8■□□□□ 0.44
SDHA-219ENST00000515815 ILDR2Q71H61 639 aa17.8■□□□□ 0.44
SDHA-219ENST00000515815 ITSN1Q15811 1721 aa17.8■□□□□ 0.44
SDHA-219ENST00000515815 COL22A1Q8NFW1 1626 aaPredicted RBP17.79■□□□□ 0.44
SDHA-219ENST00000515815 LRP6O75581 1613 aa17.78■□□□□ 0.44
SDHA-219ENST00000515815 ADGRF5Q8IZF2 1346 aa17.77■□□□□ 0.44
SDHA-219ENST00000515815 RGL3Q3MIN7 710 aa17.77■□□□□ 0.44
SDHA-219ENST00000515815 DLC1Q96QB1 1528 aa17.77■□□□□ 0.43
SDHA-219ENST00000515815 ADGRB1O14514 1584 aa17.76■□□□□ 0.43
SDHA-219ENST00000515815 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
SDHA-219ENST00000515815 C1orf167Q5SNV9 1468 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms