RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 IQGAP1P46940 1657 aa38.23■■■■□ 3.71
DDR1-279ENST00000515529 CCDC144AA2RUR9 1427 aa38.23■■■■□ 3.71
DDR1-279ENST00000515529 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.23■■■■□ 3.71
DDR1-279ENST00000515529 KIF1BO60333 1816 aa38.19■■■■□ 3.7
DDR1-279ENST00000515529 BCANQ96GW7 911 aa38.19■■■■□ 3.7
DDR1-279ENST00000515529 ZFYVE9O95405 1425 aa38.19■■■■□ 3.7
DDR1-279ENST00000515529 NUTM2DQ5VT03 806 aaPredicted RBP38.12■■■■□ 3.69
DDR1-279ENST00000515529 ZNF335Q9H4Z2 1342 aaPredicted RBP38.12■■■■□ 3.69
DDR1-279ENST00000515529 PLEKHG1Q9ULL1 1385 aa38.08■■■■□ 3.69
DDR1-279ENST00000515529 SENP3Q9H4L4 574 aaPredicted RBP38.07■■■■□ 3.68
DDR1-279ENST00000515529 ANKRD30BQ9BXX2 1392 aa38.04■■■■□ 3.68
DDR1-279ENST00000515529 SLC26A8Q96RN1 970 aa38.03■■■■□ 3.68
DDR1-279ENST00000515529 RPGRIP1LQ68CZ1 1315 aa38.03■■■■□ 3.68
DDR1-279ENST00000515529 CERKQ8TCT0 537 aa38.01■■■■□ 3.68
DDR1-279ENST00000515529 RGL3Q3MIN7 710 aa38■■■■□ 3.67
DDR1-279ENST00000515529 LTBP4Q8N2S1 1624 aa38■■■■□ 3.67
DDR1-279ENST00000515529 NEXMIFQ5QGS0 1516 aa37.99■■■■□ 3.67
DDR1-279ENST00000515529 VGFO15240 615 aaPredicted RBP37.96■■■■□ 3.67
DDR1-279ENST00000515529 SPATA31E1Q6ZUB1 1445 aa37.95■■■■□ 3.67
DDR1-279ENST00000515529 CPS1P31327 1500 aa37.92■■■■□ 3.66
DDR1-279ENST00000515529 TBX22Q9Y458 520 aa37.9■■■■□ 3.66
DDR1-279ENST00000515529 DIP2AQ14689 1571 aa37.88■■■■□ 3.65
DDR1-279ENST00000515529 PCGF6Q9BYE7 350 aa37.87■■■■□ 3.65
DDR1-279ENST00000515529 ADAMTS13Q76LX8 1427 aa37.86■■■■□ 3.65
DDR1-279ENST00000515529 PPLO60437 1756 aa37.85■■■■□ 3.65
DDR1-279ENST00000515529 KCNA6P17658 529 aa37.84■■■■□ 3.65
DDR1-279ENST00000515529 SETBP1Q9Y6X0 1596 aa37.84■■■■□ 3.65
DDR1-279ENST00000515529 IQSEC2Q5JU85 1478 aa37.8■■■■□ 3.64
DDR1-279ENST00000515529 DHX57Q6P158 1386 aaKnown RBP37.79■■■■□ 3.64
DDR1-279ENST00000515529 STRCP1A6NGW2 1772 aa37.78■■■■□ 3.64
DDR1-279ENST00000515529 NRXN3Q9Y4C0 1643 aa37.77■■■■□ 3.64
DDR1-279ENST00000515529 PIK3R4Q99570 1358 aa37.77■■■■□ 3.64
DDR1-279ENST00000515529 ADGRF5Q8IZF2 1346 aa37.74■■■■□ 3.63
DDR1-279ENST00000515529 IFT172Q9UG01 1749 aa37.74■■■■□ 3.63
DDR1-279ENST00000515529 FBXO41Q8TF61 875 aa37.72■■■■□ 3.63
DDR1-279ENST00000515529 NWD1Q149M9 1564 aa37.72■■■■□ 3.63
DDR1-279ENST00000515529 LRRC7Q96NW7 1537 aa37.71■■■■□ 3.63
DDR1-279ENST00000515529 PROSER2Q86WR7 435 aaPredicted RBP37.71■■■■□ 3.63
DDR1-279ENST00000515529 NKTRP30414 1462 aaKnown RBP37.71■■■■□ 3.63
DDR1-279ENST00000515529 CHD2O14647 1828 aaKnown RBP37.69■■■■□ 3.62
DDR1-279ENST00000515529 MYOM2P54296 1465 aa37.67■■■■□ 3.62
DDR1-279ENST00000515529 DCAF11Q8TEB1 546 aa37.67■■■■□ 3.62
DDR1-279ENST00000515529 METP08581 1390 aa37.67■■■■□ 3.62
DDR1-279ENST00000515529 AMOTL2Q9Y2J4 779 aa37.66■■■■□ 3.62
DDR1-279ENST00000515529 ALKQ9UM73 1620 aa37.65■■■■□ 3.62
DDR1-279ENST00000515529 KDM2AQ9Y2K7 1162 aa37.65■■■■□ 3.62
DDR1-279ENST00000515529 STAC3Q96MF2 364 aa37.63■■■■□ 3.61
DDR1-279ENST00000515529 PIK3C2GO75747 1445 aa37.62■■■■□ 3.61
DDR1-279ENST00000515529 TMEM94Q12767 1356 aa37.62■■■■□ 3.61
DDR1-279ENST00000515529 UBAP1LF5GYI3 381 aa37.61■■■■□ 3.61
DDR1-279ENST00000515529 PTPRUQ92729 1446 aa37.61■■■■□ 3.61
DDR1-279ENST00000515529 NEUROD1Q13562 356 aa37.6■■■■□ 3.61
DDR1-279ENST00000515529 SIN3AQ96ST3 1273 aa37.6■■■■□ 3.61
DDR1-279ENST00000515529 NRXN1Q9ULB1 1477 aa37.58■■■■□ 3.61
DDR1-279ENST00000515529 RBM33Q96EV2 1170 aaKnown RBP37.56■■■■□ 3.6
DDR1-279ENST00000515529 TOM1O60784 492 aa37.55■■■■□ 3.6
DDR1-279ENST00000515529 ILDR1Q86SU0 546 aaPredicted RBP37.55■■■■□ 3.6
DDR1-279ENST00000515529 SETD1AO15047 1707 aaKnown RBP37.55■■■■□ 3.6
DDR1-279ENST00000515529 C14orf37Q86TY3 774 aa37.54■■■■□ 3.6
DDR1-279ENST00000515529 XRN1Q8IZH2 1706 aaKnown RBP37.53■■■■□ 3.6
DDR1-279ENST00000515529 C14orf93Q9H972 538 aaKnown RBP37.51■■■■□ 3.6
DDR1-279ENST00000515529 CFAP70Q5T0N1 1121 aa37.49■■■■□ 3.59
DDR1-279ENST00000515529 LAMC1P11047 1609 aa37.49■■■■□ 3.59
DDR1-279ENST00000515529 XIRP1Q702N8 1843 aaKnown RBP37.48■■■■□ 3.59
DDR1-279ENST00000515529 MSH6P52701 1360 aa37.48■■■■□ 3.59
DDR1-279ENST00000515529 NCOA3Q9Y6Q9 1424 aa37.47■■■■□ 3.59
DDR1-279ENST00000515529 TMEM132EQ6IEE7 984 aa37.46■■■■□ 3.59
DDR1-279ENST00000515529 SCAF1Q9H7N4 1312 aaKnown RBP37.45■■■■□ 3.59
DDR1-279ENST00000515529 STK26Q9P289 416 aa37.44■■■■□ 3.58
DDR1-279ENST00000515529 L3MBTL2Q969R5 705 aa37.43■■■■□ 3.58
DDR1-279ENST00000515529 PTCH1Q13635 1447 aa37.42■■■■□ 3.58
DDR1-279ENST00000515529 PIP4K2BP78356 416 aa37.41■■■■□ 3.58
DDR1-279ENST00000515529 LRPPRCP42704 1394 aaKnown RBP37.41■■■■□ 3.58
DDR1-279ENST00000515529 ASXL1Q8IXJ9 1541 aa37.39■■■■□ 3.58
DDR1-279ENST00000515529 PRAG1Q86YV5 1406 aa37.37■■■■□ 3.57
DDR1-279ENST00000515529 YTHDC2Q9H6S0 1430 aaKnown RBP37.37■■■■□ 3.57
DDR1-279ENST00000515529 TONSLQ96HA7 1378 aa37.37■■■■□ 3.57
DDR1-279ENST00000515529 ROBO2Q9HCK4 1378 aa37.37■■■■□ 3.57
DDR1-279ENST00000515529 C19orf44Q9H6X5 657 aa37.36■■■■□ 3.57
DDR1-279ENST00000515529 ABCC11Q96J66 1382 aa37.34■■■■□ 3.57
DDR1-279ENST00000515529 ATF3P18847 181 aa37.33■■■■□ 3.57
DDR1-279ENST00000515529 TECPR2O15040 1411 aa37.32■■■■□ 3.56
DDR1-279ENST00000515529 CADPS2Q86UW7 1296 aa37.3■■■■□ 3.56
DDR1-279ENST00000515529 ADGRL3Q9HAR2 1447 aa37.28■■■■□ 3.56
DDR1-279ENST00000515529 KNDC1Q76NI1 1749 aa37.28■■■■□ 3.56
DDR1-279ENST00000515529 CCER1Q8TC90 406 aaPredicted RBP37.28■■■■□ 3.56
DDR1-279ENST00000515529 CLSPNQ9HAW4 1339 aa37.28■■■■□ 3.56
DDR1-279ENST00000515529 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.26■■■■□ 3.56
DDR1-279ENST00000515529 ADGRB1O14514 1584 aa37.25■■■■□ 3.55
DDR1-279ENST00000515529 DCCP43146 1447 aa37.24■■■■□ 3.55
DDR1-279ENST00000515529 WAPLQ7Z5K2 1190 aa37.23■■■■□ 3.55
DDR1-279ENST00000515529 SLAIN2Q9P270 581 aa37.23■■■■□ 3.55
DDR1-279ENST00000515529 KIAA1210Q9ULL0 1709 aa37.22■■■■□ 3.55
DDR1-279ENST00000515529 SIRT1Q96EB6 747 aa37.22■■■■□ 3.55
DDR1-279ENST00000515529 FAM135BQ49AJ0 1406 aa37.21■■■■□ 3.55
DDR1-279ENST00000515529 TRAK1Q9UPV9 953 aa37.21■■■■□ 3.55
DDR1-279ENST00000515529 POGKQ9P215 609 aa37.2■■■■□ 3.55
DDR1-279ENST00000515529 NALCNQ8IZF0 1738 aa37.19■■■■□ 3.54
DDR1-279ENST00000515529 DLC1Q96QB1 1528 aa37.17■■■■□ 3.54
DDR1-279ENST00000515529 PRAM1Q96QH2 718 aa37.17■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms