RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 BCANQ96GW7 911 aa25.98■■□□□ 1.75
DDR1-277ENST00000515219 SENP3Q9H4L4 574 aaPredicted RBP25.96■■□□□ 1.75
DDR1-277ENST00000515219 TRPM2O94759 1503 aa25.96■■□□□ 1.75
DDR1-277ENST00000515219 CLTCL1P53675 1640 aa25.96■■□□□ 1.75
DDR1-277ENST00000515219 SETD5Q9C0A6 1442 aa25.95■■□□□ 1.74
DDR1-277ENST00000515219 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.94■■□□□ 1.74
DDR1-277ENST00000515219 SLC26A8Q96RN1 970 aa25.94■■□□□ 1.74
DDR1-277ENST00000515219 NUTM2DQ5VT03 806 aaPredicted RBP25.93■■□□□ 1.74
DDR1-277ENST00000515219 KIF1BO60333 1816 aa25.92■■□□□ 1.74
DDR1-277ENST00000515219 PLEKHG1Q9ULL1 1385 aa25.92■■□□□ 1.74
DDR1-277ENST00000515219 UBAP1LF5GYI3 381 aa25.91■■□□□ 1.74
DDR1-277ENST00000515219 ZNF326Q5BKZ1 582 aaKnown RBP25.9■■□□□ 1.74
DDR1-277ENST00000515219 MPHOSPH9Q99550 1183 aa25.89■■□□□ 1.74
DDR1-277ENST00000515219 ACIN1Q9UKV3 1341 aaKnown RBP25.88■■□□□ 1.73
DDR1-277ENST00000515219 FOXD1Q16676 465 aa25.88■■□□□ 1.73
DDR1-277ENST00000515219 LRRC7Q96NW7 1537 aa25.88■■□□□ 1.73
DDR1-277ENST00000515219 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
DDR1-277ENST00000515219 KCNA6P17658 529 aa25.83■■□□□ 1.73
DDR1-277ENST00000515219 TOM1O60784 492 aa25.81■■□□□ 1.72
DDR1-277ENST00000515219 TBX22Q9Y458 520 aa25.8■■□□□ 1.72
DDR1-277ENST00000515219 XIRP1Q702N8 1843 aaKnown RBP25.79■■□□□ 1.72
DDR1-277ENST00000515219 CHD2O14647 1828 aaKnown RBP25.79■■□□□ 1.72
DDR1-277ENST00000515219 ADAMTS13Q76LX8 1427 aa25.79■■□□□ 1.72
DDR1-277ENST00000515219 NEXMIFQ5QGS0 1516 aa25.78■■□□□ 1.72
DDR1-277ENST00000515219 DIP2AQ14689 1571 aa25.78■■□□□ 1.72
DDR1-277ENST00000515219 NWD1Q149M9 1564 aa25.78■■□□□ 1.72
DDR1-277ENST00000515219 SCAF1Q9H7N4 1312 aaKnown RBP25.78■■□□□ 1.72
DDR1-277ENST00000515219 PIP4K2BP78356 416 aa25.76■■□□□ 1.71
DDR1-277ENST00000515219 PROSER2Q86WR7 435 aaPredicted RBP25.76■■□□□ 1.71
DDR1-277ENST00000515219 CCDC144AA2RUR9 1427 aa25.76■■□□□ 1.71
DDR1-277ENST00000515219 NKTRP30414 1462 aaKnown RBP25.74■■□□□ 1.71
DDR1-277ENST00000515219 TMEM94Q12767 1356 aa25.73■■□□□ 1.71
DDR1-277ENST00000515219 NRXN3Q9Y4C0 1643 aa25.73■■□□□ 1.71
DDR1-277ENST00000515219 SETBP1Q9Y6X0 1596 aa25.73■■□□□ 1.71
DDR1-277ENST00000515219 RBM33Q96EV2 1170 aaKnown RBP25.72■■□□□ 1.71
DDR1-277ENST00000515219 PIK3R4Q99570 1358 aa25.7■■□□□ 1.71
DDR1-277ENST00000515219 ALKQ9UM73 1620 aa25.7■■□□□ 1.71
DDR1-277ENST00000515219 PPLO60437 1756 aa25.69■■□□□ 1.7
DDR1-277ENST00000515219 RPGRIP1LQ68CZ1 1315 aa25.69■■□□□ 1.7
DDR1-277ENST00000515219 VGFO15240 615 aaPredicted RBP25.69■■□□□ 1.7
DDR1-277ENST00000515219 HRCP23327 699 aa25.68■■□□□ 1.7
DDR1-277ENST00000515219 RGL3Q3MIN7 710 aa25.67■■□□□ 1.7
DDR1-277ENST00000515219 AMOTL2Q9Y2J4 779 aa25.64■■□□□ 1.7
DDR1-277ENST00000515219 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
DDR1-277ENST00000515219 PTPRUQ92729 1446 aa25.63■■□□□ 1.69
DDR1-277ENST00000515219 METP08581 1390 aa25.62■■□□□ 1.69
DDR1-277ENST00000515219 MSH6P52701 1360 aa25.6■■□□□ 1.69
DDR1-277ENST00000515219 XRN1Q8IZH2 1706 aaKnown RBP25.6■■□□□ 1.69
DDR1-277ENST00000515219 IFT172Q9UG01 1749 aa25.6■■□□□ 1.69
DDR1-277ENST00000515219 C14orf37Q86TY3 774 aa25.59■■□□□ 1.69
DDR1-277ENST00000515219 HSPA1LP34931 641 aa25.58■■□□□ 1.69
DDR1-277ENST00000515219 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
DDR1-277ENST00000515219 NCOA3Q9Y6Q9 1424 aa25.56■■□□□ 1.68
DDR1-277ENST00000515219 ANKRD30BQ9BXX2 1392 aa25.56■■□□□ 1.68
DDR1-277ENST00000515219 ADGRF5Q8IZF2 1346 aa25.55■■□□□ 1.68
DDR1-277ENST00000515219 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.51■■□□□ 1.68
DDR1-277ENST00000515219 C19orf44Q9H6X5 657 aa25.49■■□□□ 1.67
DDR1-277ENST00000515219 ROBO1Q9Y6N7 1651 aa25.48■■□□□ 1.67
DDR1-277ENST00000515219 FAM135BQ49AJ0 1406 aa25.48■■□□□ 1.67
DDR1-277ENST00000515219 ATF3P18847 181 aa25.47■■□□□ 1.67
DDR1-277ENST00000515219 SLAIN2Q9P270 581 aa25.47■■□□□ 1.67
DDR1-277ENST00000515219 CADPS2Q86UW7 1296 aa25.45■■□□□ 1.66
DDR1-277ENST00000515219 PIK3C2GO75747 1445 aa25.45■■□□□ 1.66
DDR1-277ENST00000515219 MYOM2P54296 1465 aa25.42■■□□□ 1.66
DDR1-277ENST00000515219 PTCH1Q13635 1447 aa25.42■■□□□ 1.66
DDR1-277ENST00000515219 ROBO2Q9HCK4 1378 aa25.41■■□□□ 1.66
DDR1-277ENST00000515219 NALCNQ8IZF0 1738 aa25.4■■□□□ 1.66
DDR1-277ENST00000515219 DCCP43146 1447 aa25.39■■□□□ 1.66
DDR1-277ENST00000515219 ADGRL3Q9HAR2 1447 aa25.39■■□□□ 1.66
DDR1-277ENST00000515219 DISP3Q9P2K9 1392 aa25.39■■□□□ 1.65
DDR1-277ENST00000515219 NRXN1Q9ULB1 1477 aa25.39■■□□□ 1.65
DDR1-277ENST00000515219 TMEM132EQ6IEE7 984 aa25.38■■□□□ 1.65
DDR1-277ENST00000515219 STK26Q9P289 416 aa25.38■■□□□ 1.65
DDR1-277ENST00000515219 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
DDR1-277ENST00000515219 KDM2AQ9Y2K7 1162 aa25.37■■□□□ 1.65
DDR1-277ENST00000515219 LAMC1P11047 1609 aa25.37■■□□□ 1.65
DDR1-277ENST00000515219 ASXL1Q8IXJ9 1541 aa25.37■■□□□ 1.65
DDR1-277ENST00000515219 DCAF11Q8TEB1 546 aa25.36■■□□□ 1.65
DDR1-277ENST00000515219 C14orf93Q9H972 538 aaKnown RBP25.36■■□□□ 1.65
DDR1-277ENST00000515219 CFAP70Q5T0N1 1121 aa25.35■■□□□ 1.65
DDR1-277ENST00000515219 PHLPP1O60346 1717 aa25.34■■□□□ 1.65
DDR1-277ENST00000515219 LRPPRCP42704 1394 aaKnown RBP25.34■■□□□ 1.65
DDR1-277ENST00000515219 TRIM26Q12899 539 aaPredicted RBP25.34■■□□□ 1.65
DDR1-277ENST00000515219 KNDC1Q76NI1 1749 aa25.33■■□□□ 1.65
DDR1-277ENST00000515219 MST1RQ04912 1400 aa25.31■■□□□ 1.64
DDR1-277ENST00000515219 YTHDC2Q9H6S0 1430 aaKnown RBP25.31■■□□□ 1.64
DDR1-277ENST00000515219 ABCC11Q96J66 1382 aa25.31■■□□□ 1.64
DDR1-277ENST00000515219 TECPR2O15040 1411 aa25.3■■□□□ 1.64
DDR1-277ENST00000515219 MED1Q15648 1581 aaPredicted RBP25.3■■□□□ 1.64
DDR1-277ENST00000515219 DHX57Q6P158 1386 aaKnown RBP25.3■■□□□ 1.64
DDR1-277ENST00000515219 STAC3Q96MF2 364 aa25.29■■□□□ 1.64
DDR1-277ENST00000515219 BRINP3Q76B58 766 aa25.28■■□□□ 1.64
DDR1-277ENST00000515219 WAPLQ7Z5K2 1190 aa25.28■■□□□ 1.64
DDR1-277ENST00000515219 AHDC1Q5TGY3 1603 aaPredicted RBP25.24■■□□□ 1.63
DDR1-277ENST00000515219 PLEKHH1Q9ULM0 1364 aa25.24■■□□□ 1.63
DDR1-277ENST00000515219 COL16A1Q07092 1604 aaPredicted RBP25.23■■□□□ 1.63
DDR1-277ENST00000515219 C1orf167Q5SNV9 1468 aa25.22■■□□□ 1.63
DDR1-277ENST00000515219 SIRT1Q96EB6 747 aa25.21■■□□□ 1.63
DDR1-277ENST00000515219 ADGRB1O14514 1584 aa25.21■■□□□ 1.63
DDR1-277ENST00000515219 CDC42BPGQ6DT37 1551 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms