RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 NUP155O75694 1391 aa25.02■■□□□ 1.6
TNFRSF25-220ENST00000515145 XIRP1Q702N8 1843 aaKnown RBP25.01■■□□□ 1.59
TNFRSF25-220ENST00000515145 HSPA1LP34931 641 aa25.01■■□□□ 1.59
TNFRSF25-220ENST00000515145 RIMS2Q9UQ26 1411 aa24.98■■□□□ 1.59
TNFRSF25-220ENST00000515145 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
TNFRSF25-220ENST00000515145 SLC26A8Q96RN1 970 aa24.97■■□□□ 1.59
TNFRSF25-220ENST00000515145 PLEKHG1Q9ULL1 1385 aa24.95■■□□□ 1.59
TNFRSF25-220ENST00000515145 KCNA6P17658 529 aa24.94■■□□□ 1.58
TNFRSF25-220ENST00000515145 NKTRP30414 1462 aaKnown RBP24.93■■□□□ 1.58
TNFRSF25-220ENST00000515145 TMEM94Q12767 1356 aa24.92■■□□□ 1.58
TNFRSF25-220ENST00000515145 NAIPQ13075 1403 aa24.91■■□□□ 1.58
TNFRSF25-220ENST00000515145 PPP1R15AO75807 674 aaPredicted RBP24.9■■□□□ 1.58
TNFRSF25-220ENST00000515145 CHGAP10645 457 aaKnown RBP24.9■■□□□ 1.58
TNFRSF25-220ENST00000515145 SPHKAPQ2M3C7 1700 aa24.89■■□□□ 1.58
TNFRSF25-220ENST00000515145 BCANQ96GW7 911 aa24.88■■□□□ 1.57
TNFRSF25-220ENST00000515145 HDGFP51858 240 aaKnown RBP24.87■■□□□ 1.57
TNFRSF25-220ENST00000515145 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
TNFRSF25-220ENST00000515145 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.86■■□□□ 1.57
TNFRSF25-220ENST00000515145 CHD2O14647 1828 aaKnown RBP24.85■■□□□ 1.57
TNFRSF25-220ENST00000515145 ADAMTS13Q76LX8 1427 aa24.85■■□□□ 1.57
TNFRSF25-220ENST00000515145 PROSER2Q86WR7 435 aaPredicted RBP24.84■■□□□ 1.57
TNFRSF25-220ENST00000515145 DIP2AQ14689 1571 aa24.84■■□□□ 1.57
TNFRSF25-220ENST00000515145 HFM1A2PYH4 1435 aa24.83■■□□□ 1.57
TNFRSF25-220ENST00000515145 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
TNFRSF25-220ENST00000515145 RBM33Q96EV2 1170 aaKnown RBP24.81■■□□□ 1.56
TNFRSF25-220ENST00000515145 TBX22Q9Y458 520 aa24.81■■□□□ 1.56
TNFRSF25-220ENST00000515145 PHF23Q9BUL5 403 aaPredicted RBP24.8■■□□□ 1.56
TNFRSF25-220ENST00000515145 TRPM2O94759 1503 aa24.8■■□□□ 1.56
TNFRSF25-220ENST00000515145 CLTCL1P53675 1640 aa24.79■■□□□ 1.56
TNFRSF25-220ENST00000515145 FAM135BQ49AJ0 1406 aa24.78■■□□□ 1.56
TNFRSF25-220ENST00000515145 PIK3R4Q99570 1358 aa24.76■■□□□ 1.55
TNFRSF25-220ENST00000515145 MSH6P52701 1360 aa24.75■■□□□ 1.55
TNFRSF25-220ENST00000515145 NRXN3Q9Y4C0 1643 aa24.75■■□□□ 1.55
TNFRSF25-220ENST00000515145 ROBO1Q9Y6N7 1651 aa24.74■■□□□ 1.55
TNFRSF25-220ENST00000515145 SETBP1Q9Y6X0 1596 aa24.73■■□□□ 1.55
TNFRSF25-220ENST00000515145 NEXMIFQ5QGS0 1516 aa24.71■■□□□ 1.55
TNFRSF25-220ENST00000515145 PTPRUQ92729 1446 aa24.7■■□□□ 1.55
TNFRSF25-220ENST00000515145 NCOA3Q9Y6Q9 1424 aa24.7■■□□□ 1.55
TNFRSF25-220ENST00000515145 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
TNFRSF25-220ENST00000515145 TRIM52Q96A61 297 aa24.69■■□□□ 1.54
TNFRSF25-220ENST00000515145 KIF1BO60333 1816 aa24.68■■□□□ 1.54
TNFRSF25-220ENST00000515145 XRN1Q8IZH2 1706 aaKnown RBP24.67■■□□□ 1.54
TNFRSF25-220ENST00000515145 AMOTL2Q9Y2J4 779 aa24.64■■□□□ 1.54
TNFRSF25-220ENST00000515145 SLC4A1APQ9BWU0 796 aaKnown RBP24.63■■□□□ 1.53
TNFRSF25-220ENST00000515145 SLAIN2Q9P270 581 aa24.63■■□□□ 1.53
TNFRSF25-220ENST00000515145 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.63■■□□□ 1.53
TNFRSF25-220ENST00000515145 C14orf37Q86TY3 774 aa24.61■■□□□ 1.53
TNFRSF25-220ENST00000515145 METP08581 1390 aa24.61■■□□□ 1.53
TNFRSF25-220ENST00000515145 PHLPP1O60346 1717 aa24.58■■□□□ 1.53
TNFRSF25-220ENST00000515145 C19orf44Q9H6X5 657 aa24.58■■□□□ 1.53
TNFRSF25-220ENST00000515145 CADPS2Q86UW7 1296 aa24.56■■□□□ 1.52
TNFRSF25-220ENST00000515145 DCCP43146 1447 aa24.55■■□□□ 1.52
TNFRSF25-220ENST00000515145 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
TNFRSF25-220ENST00000515145 COL16A1Q07092 1604 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF25-220ENST00000515145 PPLO60437 1756 aa24.53■■□□□ 1.52
TNFRSF25-220ENST00000515145 ATF3P18847 181 aa24.53■■□□□ 1.52
TNFRSF25-220ENST00000515145 FOXD1Q16676 465 aa24.53■■□□□ 1.52
TNFRSF25-220ENST00000515145 RGS17Q9UGC6 210 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF25-220ENST00000515145 AHDC1Q5TGY3 1603 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF25-220ENST00000515145 RPGRIP1LQ68CZ1 1315 aa24.51■■□□□ 1.51
TNFRSF25-220ENST00000515145 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
TNFRSF25-220ENST00000515145 JCADQ9P266 1359 aa24.49■■□□□ 1.51
TNFRSF25-220ENST00000515145 ADGRL3Q9HAR2 1447 aa24.49■■□□□ 1.51
TNFRSF25-220ENST00000515145 CCDC144AA2RUR9 1427 aa24.48■■□□□ 1.51
TNFRSF25-220ENST00000515145 NALCNQ8IZF0 1738 aa24.48■■□□□ 1.51
TNFRSF25-220ENST00000515145 MST1RQ04912 1400 aa24.47■■□□□ 1.51
TNFRSF25-220ENST00000515145 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
TNFRSF25-220ENST00000515145 MPHOSPH9Q99550 1183 aa24.47■■□□□ 1.51
TNFRSF25-220ENST00000515145 PRAG1Q86YV5 1406 aa24.46■■□□□ 1.51
TNFRSF25-220ENST00000515145 SPATA31E1Q6ZUB1 1445 aa24.45■■□□□ 1.51
TNFRSF25-220ENST00000515145 BRINP3Q76B58 766 aa24.44■■□□□ 1.5
TNFRSF25-220ENST00000515145 ASXL1Q8IXJ9 1541 aa24.44■■□□□ 1.5
TNFRSF25-220ENST00000515145 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
TNFRSF25-220ENST00000515145 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
TNFRSF25-220ENST00000515145 IFT172Q9UG01 1749 aa24.41■■□□□ 1.5
TNFRSF25-220ENST00000515145 SHPRHQ149N8 1683 aa24.4■■□□□ 1.5
TNFRSF25-220ENST00000515145 NHSL1Q5SYE7 1610 aa24.39■■□□□ 1.5
TNFRSF25-220ENST00000515145 ACIN1Q9UKV3 1341 aaKnown RBP24.38■■□□□ 1.49
TNFRSF25-220ENST00000515145 LRP6O75581 1613 aa24.38■■□□□ 1.49
TNFRSF25-220ENST00000515145 ADGRF5Q8IZF2 1346 aa24.37■■□□□ 1.49
TNFRSF25-220ENST00000515145 POTEAQ6S8J7 498 aa24.36■■□□□ 1.49
TNFRSF25-220ENST00000515145 ANKRD30BQ9BXX2 1392 aa24.36■■□□□ 1.49
TNFRSF25-220ENST00000515145 RAB3GAP2Q9H2M9 1393 aa24.36■■□□□ 1.49
TNFRSF25-220ENST00000515145 SPATA31A6Q5VVP1 1343 aa24.35■■□□□ 1.49
TNFRSF25-220ENST00000515145 RGL3Q3MIN7 710 aa24.35■■□□□ 1.49
TNFRSF25-220ENST00000515145 C1orf167Q5SNV9 1468 aa24.33■■□□□ 1.49
TNFRSF25-220ENST00000515145 PIK3C2GO75747 1445 aa24.32■■□□□ 1.48
TNFRSF25-220ENST00000515145 TECPR2O15040 1411 aa24.3■■□□□ 1.48
TNFRSF25-220ENST00000515145 LAMC1P11047 1609 aa24.28■■□□□ 1.48
TNFRSF25-220ENST00000515145 CDC42BPGQ6DT37 1551 aa24.28■■□□□ 1.48
TNFRSF25-220ENST00000515145 LRPPRCP42704 1394 aaKnown RBP24.28■■□□□ 1.48
TNFRSF25-220ENST00000515145 KNDC1Q76NI1 1749 aa24.27■■□□□ 1.48
TNFRSF25-220ENST00000515145 DDX17Q92841 729 aaKnown RBP24.26■■□□□ 1.47
TNFRSF25-220ENST00000515145 MYOM2P54296 1465 aa24.26■■□□□ 1.47
TNFRSF25-220ENST00000515145 NRXN1Q9ULB1 1477 aa24.26■■□□□ 1.47
TNFRSF25-220ENST00000515145 MEX3CQ5U5Q3 659 aaKnown RBP24.23■■□□□ 1.47
TNFRSF25-220ENST00000515145 PNPLA6Q8IY17 1366 aa24.23■■□□□ 1.47
TNFRSF25-220ENST00000515145 ABCC11Q96J66 1382 aa24.23■■□□□ 1.47
TNFRSF25-220ENST00000515145 LRRC59Q96AG4 307 aaKnown RBP24.22■■□□□ 1.47
TNFRSF25-220ENST00000515145 ORAI2Q96SN7 254 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms