RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SPHKAPQ2M3C7 1700 aa36.85■■■■□ 3.49
SNF8-213ENST00000514929 LRRC7Q96NW7 1537 aa36.85■■■■□ 3.49
SNF8-213ENST00000514929 SLC26A8Q96RN1 970 aa36.84■■■■□ 3.49
SNF8-213ENST00000514929 TOM1O60784 492 aa36.82■■■■□ 3.48
SNF8-213ENST00000514929 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.79■■■■□ 3.48
SNF8-213ENST00000514929 SENP3Q9H4L4 574 aaPredicted RBP36.79■■■■□ 3.48
SNF8-213ENST00000514929 SCAF1Q9H7N4 1312 aaKnown RBP36.78■■■■□ 3.48
SNF8-213ENST00000514929 PLEKHG1Q9ULL1 1385 aa36.78■■■■□ 3.48
SNF8-213ENST00000514929 PIP4K2BP78356 416 aa36.75■■■■□ 3.47
SNF8-213ENST00000514929 NUTM2DQ5VT03 806 aaPredicted RBP36.73■■■■□ 3.47
SNF8-213ENST00000514929 KCNA6P17658 529 aa36.72■■■■□ 3.47
SNF8-213ENST00000514929 SLC4A1APQ9BWU0 796 aaKnown RBP36.71■■■■□ 3.47
SNF8-213ENST00000514929 TRPM2O94759 1503 aa36.69■■■■□ 3.46
SNF8-213ENST00000514929 CLTCL1P53675 1640 aa36.67■■■■□ 3.46
SNF8-213ENST00000514929 ZNF326Q5BKZ1 582 aaKnown RBP36.65■■■■□ 3.46
SNF8-213ENST00000514929 NWD1Q149M9 1564 aa36.63■■■■□ 3.45
SNF8-213ENST00000514929 ALKQ9UM73 1620 aa36.63■■■■□ 3.45
SNF8-213ENST00000514929 XIRP1Q702N8 1843 aaKnown RBP36.62■■■■□ 3.45
SNF8-213ENST00000514929 PROSER2Q86WR7 435 aaPredicted RBP36.62■■■■□ 3.45
SNF8-213ENST00000514929 TBX22Q9Y458 520 aa36.62■■■■□ 3.45
SNF8-213ENST00000514929 TMEM94Q12767 1356 aa36.61■■■■□ 3.45
SNF8-213ENST00000514929 NKTRP30414 1462 aaKnown RBP36.6■■■■□ 3.45
SNF8-213ENST00000514929 ADAMTS13Q76LX8 1427 aa36.58■■■■□ 3.45
SNF8-213ENST00000514929 DIP2AQ14689 1571 aa36.57■■■■□ 3.45
SNF8-213ENST00000514929 KIF1BO60333 1816 aa36.57■■■■□ 3.44
SNF8-213ENST00000514929 CHD2O14647 1828 aaKnown RBP36.56■■■■□ 3.44
SNF8-213ENST00000514929 HSPA1LP34931 641 aa36.55■■■■□ 3.44
SNF8-213ENST00000514929 RBM33Q96EV2 1170 aaKnown RBP36.54■■■■□ 3.44
SNF8-213ENST00000514929 SETD5Q9C0A6 1442 aa36.51■■■■□ 3.44
SNF8-213ENST00000514929 FOXD1Q16676 465 aa36.51■■■■□ 3.44
SNF8-213ENST00000514929 MPHOSPH9Q99550 1183 aa36.49■■■■□ 3.43
SNF8-213ENST00000514929 PIK3R4Q99570 1358 aa36.49■■■■□ 3.43
SNF8-213ENST00000514929 ACIN1Q9UKV3 1341 aaKnown RBP36.48■■■■□ 3.43
SNF8-213ENST00000514929 NEXMIFQ5QGS0 1516 aa36.48■■■■□ 3.43
SNF8-213ENST00000514929 SETBP1Q9Y6X0 1596 aa36.46■■■■□ 3.43
SNF8-213ENST00000514929 DISP3Q9P2K9 1392 aa36.45■■■■□ 3.43
SNF8-213ENST00000514929 NRXN3Q9Y4C0 1643 aa36.43■■■■□ 3.42
SNF8-213ENST00000514929 MSH6P52701 1360 aa36.42■■■■□ 3.42
SNF8-213ENST00000514929 AMOTL2Q9Y2J4 779 aa36.39■■■■□ 3.42
SNF8-213ENST00000514929 CCDC144AA2RUR9 1427 aa36.39■■■■□ 3.42
SNF8-213ENST00000514929 RAB3GAP2Q9H2M9 1393 aa36.38■■■■□ 3.41
SNF8-213ENST00000514929 RPGRIP1LQ68CZ1 1315 aa36.36■■■■□ 3.41
SNF8-213ENST00000514929 PTPRUQ92729 1446 aa36.36■■■■□ 3.41
SNF8-213ENST00000514929 VGFO15240 615 aaPredicted RBP36.36■■■■□ 3.41
SNF8-213ENST00000514929 C14orf37Q86TY3 774 aa36.36■■■■□ 3.41
SNF8-213ENST00000514929 NCOA3Q9Y6Q9 1424 aa36.34■■■■□ 3.41
SNF8-213ENST00000514929 FAM135BQ49AJ0 1406 aa36.32■■■■□ 3.4
SNF8-213ENST00000514929 METP08581 1390 aa36.31■■■■□ 3.4
SNF8-213ENST00000514929 XRN1Q8IZH2 1706 aaKnown RBP36.28■■■■□ 3.4
SNF8-213ENST00000514929 PPLO60437 1756 aa36.27■■■■□ 3.4
SNF8-213ENST00000514929 ROBO1Q9Y6N7 1651 aa36.26■■■■□ 3.39
SNF8-213ENST00000514929 RGL3Q3MIN7 710 aa36.25■■■■□ 3.39
SNF8-213ENST00000514929 SLAIN2Q9P270 581 aa36.25■■■■□ 3.39
SNF8-213ENST00000514929 C19orf44Q9H6X5 657 aa36.24■■■■□ 3.39
SNF8-213ENST00000514929 SPATA31E1Q6ZUB1 1445 aa36.22■■■■□ 3.39
SNF8-213ENST00000514929 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.2■■■■□ 3.39
SNF8-213ENST00000514929 ATF3P18847 181 aa36.2■■■■□ 3.39
SNF8-213ENST00000514929 CADPS2Q86UW7 1296 aa36.19■■■■□ 3.38
SNF8-213ENST00000514929 MED1Q15648 1581 aaPredicted RBP36.18■■■■□ 3.38
SNF8-213ENST00000514929 SETD1AO15047 1707 aaKnown RBP36.16■■■■□ 3.38
SNF8-213ENST00000514929 ANKRD30BQ9BXX2 1392 aa36.15■■■■□ 3.38
SNF8-213ENST00000514929 ADGRF5Q8IZF2 1346 aa36.12■■■■□ 3.37
SNF8-213ENST00000514929 HRCP23327 699 aa36.12■■■■□ 3.37
SNF8-213ENST00000514929 IFT172Q9UG01 1749 aa36.11■■■■□ 3.37
SNF8-213ENST00000514929 DCCP43146 1447 aa36.09■■■■□ 3.37
SNF8-213ENST00000514929 ILDR2Q71H61 639 aa36.09■■■■□ 3.37
SNF8-213ENST00000514929 PTCH1Q13635 1447 aa36.06■■■■□ 3.36
SNF8-213ENST00000514929 ADGRL3Q9HAR2 1447 aa36.05■■■■□ 3.36
SNF8-213ENST00000514929 PHLPP1O60346 1717 aa36.04■■■■□ 3.36
SNF8-213ENST00000514929 ROBO2Q9HCK4 1378 aa36.02■■■■□ 3.36
SNF8-213ENST00000514929 NALCNQ8IZF0 1738 aa36.01■■■■□ 3.36
SNF8-213ENST00000514929 PHF23Q9BUL5 403 aaPredicted RBP36■■■■□ 3.35
SNF8-213ENST00000514929 PRAG1Q86YV5 1406 aa36■■■■□ 3.35
SNF8-213ENST00000514929 PIK3C2GO75747 1445 aa35.99■■■■□ 3.35
SNF8-213ENST00000514929 MST1RQ04912 1400 aa35.97■■■■□ 3.35
SNF8-213ENST00000514929 BRINP3Q76B58 766 aa35.95■■■■□ 3.35
SNF8-213ENST00000514929 STK26Q9P289 416 aa35.93■■■■□ 3.34
SNF8-213ENST00000514929 MYOM2P54296 1465 aa35.92■■■■□ 3.34
SNF8-213ENST00000514929 COL16A1Q07092 1604 aaPredicted RBP35.92■■■■□ 3.34
SNF8-213ENST00000514929 AHDC1Q5TGY3 1603 aaPredicted RBP35.92■■■■□ 3.34
SNF8-213ENST00000514929 TMEM132EQ6IEE7 984 aa35.91■■■■□ 3.34
SNF8-213ENST00000514929 JCADQ9P266 1359 aa35.9■■■■□ 3.34
SNF8-213ENST00000514929 LRPPRCP42704 1394 aaKnown RBP35.89■■■■□ 3.34
SNF8-213ENST00000514929 ASXL1Q8IXJ9 1541 aa35.88■■■■□ 3.33
SNF8-213ENST00000514929 NRXN1Q9ULB1 1477 aa35.87■■■■□ 3.33
SNF8-213ENST00000514929 C14orf93Q9H972 538 aaKnown RBP35.86■■■■□ 3.33
SNF8-213ENST00000514929 TECPR2O15040 1411 aa35.85■■■■□ 3.33
SNF8-213ENST00000514929 ABCC11Q96J66 1382 aa35.84■■■■□ 3.33
SNF8-213ENST00000514929 LAMC1P11047 1609 aa35.83■■■■□ 3.33
SNF8-213ENST00000514929 CFAP70Q5T0N1 1121 aa35.83■■■■□ 3.33
SNF8-213ENST00000514929 YTHDC2Q9H6S0 1430 aaKnown RBP35.83■■■■□ 3.33
SNF8-213ENST00000514929 KNDC1Q76NI1 1749 aa35.82■■■■□ 3.32
SNF8-213ENST00000514929 C1orf167Q5SNV9 1468 aa35.81■■■■□ 3.32
SNF8-213ENST00000514929 WAPLQ7Z5K2 1190 aa35.8■■■■□ 3.32
SNF8-213ENST00000514929 NHSL1Q5SYE7 1610 aa35.79■■■■□ 3.32
SNF8-213ENST00000514929 SOCS7O14512 581 aa35.78■■■■□ 3.32
SNF8-213ENST00000514929 DCAF11Q8TEB1 546 aa35.78■■■■□ 3.32
SNF8-213ENST00000514929 KDM2AQ9Y2K7 1162 aa35.78■■■■□ 3.32
SNF8-213ENST00000514929 DHX57Q6P158 1386 aaKnown RBP35.77■■■■□ 3.32
SNF8-213ENST00000514929 CDC42BPGQ6DT37 1551 aa35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms