RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 POTEB3A0JP26 581 aa9.52□□□□□ -0.89
RFC1-216ENST00000514572 FAM205CA6NFA0 338 aa9.52□□□□□ -0.89
RFC1-216ENST00000514572 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
RFC1-216ENST00000514572 CD46P15529 392 aa9.52□□□□□ -0.89
RFC1-216ENST00000514572 POTEBQ6S5H4 581 aa9.52□□□□□ -0.89
RFC1-216ENST00000514572 SOCS7O14512 581 aa9.51□□□□□ -0.89
RFC1-216ENST00000514572 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
RFC1-216ENST00000514572 SPIRE2Q8WWL2 714 aa9.51□□□□□ -0.89
RFC1-216ENST00000514572 SNRKQ9NRH2 765 aa9.51□□□□□ -0.89
RFC1-216ENST00000514572 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
RFC1-216ENST00000514572 COL9A1P20849 921 aa9.5□□□□□ -0.89
RFC1-216ENST00000514572 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
RFC1-216ENST00000514572 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
RFC1-216ENST00000514572 RIMBP2O15034 1052 aa9.49□□□□□ -0.89
RFC1-216ENST00000514572 SPTLC1O15269 473 aa9.49□□□□□ -0.89
RFC1-216ENST00000514572 RAD21O60216 631 aa9.49□□□□□ -0.89
RFC1-216ENST00000514572 BCL2L12Q9HB09 334 aa9.49□□□□□ -0.89
RFC1-216ENST00000514572 TSKSQ9UJT2 592 aa9.49□□□□□ -0.89
RFC1-216ENST00000514572 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
RFC1-216ENST00000514572 GJA5P36382 358 aa9.48□□□□□ -0.89
RFC1-216ENST00000514572 TMEM259Q4ZIN3 620 aa9.48□□□□□ -0.89
RFC1-216ENST00000514572 MTMR14Q8NCE2 650 aa9.48□□□□□ -0.89
RFC1-216ENST00000514572 RSBN1LQ6PCB5 846 aaPredicted RBP9.47□□□□□ -0.89
RFC1-216ENST00000514572 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
RFC1-216ENST00000514572 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.9
RFC1-216ENST00000514572 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
RFC1-216ENST00000514572 LHX6Q9UPM6 363 aa9.46□□□□□ -0.9
RFC1-216ENST00000514572 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
RFC1-216ENST00000514572 TMEM134Q9H6X4 195 aa9.45□□□□□ -0.9
RFC1-216ENST00000514572 DNAJB2P25686 324 aa9.44□□□□□ -0.9
RFC1-216ENST00000514572 ERBB3P21860 1342 aa9.43□□□□□ -0.9
RFC1-216ENST00000514572 PSDA5PKW4 1024 aaPredicted RBP9.43□□□□□ -0.9
RFC1-216ENST00000514572 MOXD2PA6NHM9 499 aa9.43□□□□□ -0.9
RFC1-216ENST00000514572 LILRB3O75022 631 aa9.43□□□□□ -0.9
RFC1-216ENST00000514572 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
RFC1-216ENST00000514572 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
RFC1-216ENST00000514572 QPCTQ16769 361 aa9.42□□□□□ -0.9
RFC1-216ENST00000514572 NUDT18Q6ZVK8 323 aa9.42□□□□□ -0.9
RFC1-216ENST00000514572 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
RFC1-216ENST00000514572 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
RFC1-216ENST00000514572 ATP1B4Q9UN42 357 aaPredicted RBP9.42□□□□□ -0.9
RFC1-216ENST00000514572 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
RFC1-216ENST00000514572 NBPF26B4DH59 902 aa9.41□□□□□ -0.9
RFC1-216ENST00000514572 CCDC97Q96F63 343 aaPredicted RBP9.41□□□□□ -0.9
RFC1-216ENST00000514572 VARS2Q5ST30 1063 aaKnown RBP9.4□□□□□ -0.9
RFC1-216ENST00000514572 SPNS2Q8IVW8 549 aa9.4□□□□□ -0.9
RFC1-216ENST00000514572 NECTIN2Q92692 538 aa9.4□□□□□ -0.9
RFC1-216ENST00000514572 TATDN2Q93075 761 aa9.4□□□□□ -0.9
RFC1-216ENST00000514572 DDX11L8A8MPP1 907 aa9.39□□□□□ -0.91
RFC1-216ENST00000514572 PTPREP23469 700 aa9.39□□□□□ -0.91
RFC1-216ENST00000514572 GDPD2Q9HCC8 539 aa9.39□□□□□ -0.91
RFC1-216ENST00000514572 NUTM1Q86Y26 1132 aa9.38□□□□□ -0.91
RFC1-216ENST00000514572 TRAIPQ9BWF2 469 aa9.38□□□□□ -0.91
RFC1-216ENST00000514572 ZNF330Q9Y3S2 320 aaPredicted RBP9.38□□□□□ -0.91
RFC1-216ENST00000514572 PCDHB15Q9Y5E8 787 aa9.38□□□□□ -0.91
RFC1-216ENST00000514572 NDUFV2P19404 249 aa9.37□□□□□ -0.91
RFC1-216ENST00000514572 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
RFC1-216ENST00000514572 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
RFC1-216ENST00000514572 PNMA3Q9UL41 463 aa9.37□□□□□ -0.91
RFC1-216ENST00000514572 GPR37L1O60883 481 aa9.35□□□□□ -0.91
RFC1-216ENST00000514572 USP17L8P0C7I0 530 aa9.35□□□□□ -0.91
RFC1-216ENST00000514572 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
RFC1-216ENST00000514572 GJD4Q96KN9 370 aaPredicted RBP9.35□□□□□ -0.91
RFC1-216ENST00000514572 TBC1D2BQ9UPU7 963 aa9.35□□□□□ -0.91
RFC1-216ENST00000514572 USP46P62068 366 aa9.34□□□□□ -0.91
RFC1-216ENST00000514572 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
RFC1-216ENST00000514572 HOXA2O43364 376 aa9.33□□□□□ -0.92
RFC1-216ENST00000514572 KDM4AO75164 1064 aa9.33□□□□□ -0.92
RFC1-216ENST00000514572 GCGRP47871 477 aa9.33□□□□□ -0.92
RFC1-216ENST00000514572 CSPP1Q1MSJ5 1256 aa9.33□□□□□ -0.92
RFC1-216ENST00000514572 PROX2Q3B8N5 592 aa9.33□□□□□ -0.92
RFC1-216ENST00000514572 CABLES1Q8TDN4 633 aa9.33□□□□□ -0.92
RFC1-216ENST00000514572 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
RFC1-216ENST00000514572 POM121CA8CG34 1229 aa9.31□□□□□ -0.92
RFC1-216ENST00000514572 SMAPO00193 183 aa9.31□□□□□ -0.92
RFC1-216ENST00000514572 AP1G2O75843 785 aa9.31□□□□□ -0.92
RFC1-216ENST00000514572 ZNF687Q8N1G0 1237 aa9.31□□□□□ -0.92
RFC1-216ENST00000514572 PCDHGC3Q9UN70 934 aa9.31□□□□□ -0.92
RFC1-216ENST00000514572 ABL2P42684 1182 aa9.3□□□□□ -0.92
RFC1-216ENST00000514572 IRF5Q13568 498 aa9.3□□□□□ -0.92
RFC1-216ENST00000514572 RETREG2Q8NC44 543 aa9.3□□□□□ -0.92
RFC1-216ENST00000514572 GLMNQ92990 594 aa9.3□□□□□ -0.92
RFC1-216ENST00000514572 ZBTB3Q9H5J0 574 aa9.3□□□□□ -0.92
RFC1-216ENST00000514572 SLC10A3P09131 477 aa9.29□□□□□ -0.92
RFC1-216ENST00000514572 WWC1Q8IX03 1113 aa9.29□□□□□ -0.92
RFC1-216ENST00000514572 RDH13Q8NBN7 331 aa9.29□□□□□ -0.92
RFC1-216ENST00000514572 ZBED2Q9BTP6 218 aa9.29□□□□□ -0.92
RFC1-216ENST00000514572 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
RFC1-216ENST00000514572 FDX1P10109 184 aa9.28□□□□□ -0.92
RFC1-216ENST00000514572 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
RFC1-216ENST00000514572 PRM3Q9NNZ6 103 aa9.28□□□□□ -0.92
RFC1-216ENST00000514572 ADAMTS19Q8TE59 1207 aa9.27□□□□□ -0.93
RFC1-216ENST00000514572 CALR3Q96L12 384 aaKnown RBP9.27□□□□□ -0.93
RFC1-216ENST00000514572 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
RFC1-216ENST00000514572 HMX1Q9NP08 348 aaPredicted RBP9.27□□□□□ -0.93
RFC1-216ENST00000514572 NDUFB9Q9Y6M9 179 aa9.27□□□□□ -0.93
RFC1-216ENST00000514572 NUTM2BA6NNL0 878 aaPredicted RBP9.26□□□□□ -0.93
RFC1-216ENST00000514572 NUTM2EB1AL46 878 aaPredicted RBP9.26□□□□□ -0.93
RFC1-216ENST00000514572 NUTM2DQ5VT03 806 aaPredicted RBP9.26□□□□□ -0.93
RFC1-216ENST00000514572 NUTM2AQ8IVF1 878 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms