RNA–Protein interactions for RNA: ENST00000513904.1

CUL9-216, Transcript of cullin 9, humanhuman

TSL 4

Gene CUL9, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9-216ENST00000513904 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.68■■■□□ 2.02
CUL9-216ENST00000513904 BCANQ96GW7 911 aa27.68■■■□□ 2.02
CUL9-216ENST00000513904 SLC26A8Q96RN1 970 aa27.68■■■□□ 2.02
CUL9-216ENST00000513904 LRRC7Q96NW7 1537 aa27.67■■■□□ 2.02
CUL9-216ENST00000513904 PLEKHG1Q9ULL1 1385 aa27.66■■■□□ 2.02
CUL9-216ENST00000513904 SLC4A1APQ9BWU0 796 aaKnown RBP27.65■■■□□ 2.02
CUL9-216ENST00000513904 TOM1O60784 492 aa27.64■■■□□ 2.02
CUL9-216ENST00000513904 TRPM2O94759 1503 aa27.62■■■□□ 2.01
CUL9-216ENST00000513904 KCNA6P17658 529 aa27.61■■■□□ 2.01
CUL9-216ENST00000513904 NUTM2DQ5VT03 806 aaPredicted RBP27.61■■■□□ 2.01
CUL9-216ENST00000513904 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
CUL9-216ENST00000513904 CLTCL1P53675 1640 aa27.58■■■□□ 2.01
CUL9-216ENST00000513904 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
CUL9-216ENST00000513904 TBX22Q9Y458 520 aa27.56■■■□□ 2
CUL9-216ENST00000513904 PIP4K2BP78356 416 aa27.55■■■□□ 2
CUL9-216ENST00000513904 SCAF1Q9H7N4 1312 aaKnown RBP27.55■■■□□ 2
CUL9-216ENST00000513904 SETD5Q9C0A6 1442 aa27.54■■■□□ 2
CUL9-216ENST00000513904 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
CUL9-216ENST00000513904 NWD1Q149M9 1564 aa27.52■■■□□ 2
CUL9-216ENST00000513904 ADAMTS13Q76LX8 1427 aa27.52■■■□□ 2
CUL9-216ENST00000513904 PROSER2Q86WR7 435 aaPredicted RBP27.51■■□□□ 1.99
CUL9-216ENST00000513904 NKTRP30414 1462 aaKnown RBP27.51■■□□□ 1.99
CUL9-216ENST00000513904 KIF1BO60333 1816 aa27.51■■□□□ 1.99
CUL9-216ENST00000513904 TMEM94Q12767 1356 aa27.5■■□□□ 1.99
CUL9-216ENST00000513904 ALKQ9UM73 1620 aa27.5■■□□□ 1.99
CUL9-216ENST00000513904 FOXD1Q16676 465 aa27.5■■□□□ 1.99
CUL9-216ENST00000513904 MPHOSPH9Q99550 1183 aa27.5■■□□□ 1.99
CUL9-216ENST00000513904 XIRP1Q702N8 1843 aaKnown RBP27.5■■□□□ 1.99
CUL9-216ENST00000513904 DIP2AQ14689 1571 aa27.49■■□□□ 1.99
CUL9-216ENST00000513904 CHD2O14647 1828 aaKnown RBP27.48■■□□□ 1.99
CUL9-216ENST00000513904 PIK3R4Q99570 1358 aa27.46■■□□□ 1.99
CUL9-216ENST00000513904 NEXMIFQ5QGS0 1516 aa27.45■■□□□ 1.98
CUL9-216ENST00000513904 RBM33Q96EV2 1170 aaKnown RBP27.43■■□□□ 1.98
CUL9-216ENST00000513904 RAB3GAP2Q9H2M9 1393 aa27.43■■□□□ 1.98
CUL9-216ENST00000513904 SETBP1Q9Y6X0 1596 aa27.43■■□□□ 1.98
CUL9-216ENST00000513904 HSPA1LP34931 641 aa27.41■■□□□ 1.98
CUL9-216ENST00000513904 NRXN3Q9Y4C0 1643 aa27.4■■□□□ 1.98
CUL9-216ENST00000513904 CCDC144AA2RUR9 1427 aa27.4■■□□□ 1.98
CUL9-216ENST00000513904 RPGRIP1LQ68CZ1 1315 aa27.4■■□□□ 1.98
CUL9-216ENST00000513904 VGFO15240 615 aaPredicted RBP27.37■■□□□ 1.97
CUL9-216ENST00000513904 MSH6P52701 1360 aa27.36■■□□□ 1.97
CUL9-216ENST00000513904 AMOTL2Q9Y2J4 779 aa27.36■■□□□ 1.97
CUL9-216ENST00000513904 PTPRUQ92729 1446 aa27.35■■□□□ 1.97
CUL9-216ENST00000513904 NCOA3Q9Y6Q9 1424 aa27.34■■□□□ 1.97
CUL9-216ENST00000513904 METP08581 1390 aa27.32■■□□□ 1.96
CUL9-216ENST00000513904 HRCP23327 699 aa27.3■■□□□ 1.96
CUL9-216ENST00000513904 FAM135BQ49AJ0 1406 aa27.29■■□□□ 1.96
CUL9-216ENST00000513904 SPATA31E1Q6ZUB1 1445 aa27.29■■□□□ 1.96
CUL9-216ENST00000513904 PPLO60437 1756 aa27.29■■□□□ 1.96
CUL9-216ENST00000513904 RGL3Q3MIN7 710 aa27.28■■□□□ 1.96
CUL9-216ENST00000513904 C14orf37Q86TY3 774 aa27.28■■□□□ 1.96
CUL9-216ENST00000513904 DISP3Q9P2K9 1392 aa27.27■■□□□ 1.96
CUL9-216ENST00000513904 XRN1Q8IZH2 1706 aaKnown RBP27.27■■□□□ 1.96
CUL9-216ENST00000513904 C19orf44Q9H6X5 657 aa27.25■■□□□ 1.95
CUL9-216ENST00000513904 SLAIN2Q9P270 581 aa27.24■■□□□ 1.95
CUL9-216ENST00000513904 ANKRD30BQ9BXX2 1392 aa27.22■■□□□ 1.95
CUL9-216ENST00000513904 CADPS2Q86UW7 1296 aa27.21■■□□□ 1.95
CUL9-216ENST00000513904 ADGRF5Q8IZF2 1346 aa27.2■■□□□ 1.95
CUL9-216ENST00000513904 SETD1AO15047 1707 aaKnown RBP27.2■■□□□ 1.94
CUL9-216ENST00000513904 ROBO1Q9Y6N7 1651 aa27.2■■□□□ 1.94
CUL9-216ENST00000513904 ATF3P18847 181 aa27.19■■□□□ 1.94
CUL9-216ENST00000513904 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.19■■□□□ 1.94
CUL9-216ENST00000513904 IFT172Q9UG01 1749 aa27.16■■□□□ 1.94
CUL9-216ENST00000513904 DCCP43146 1447 aa27.14■■□□□ 1.93
CUL9-216ENST00000513904 PTCH1Q13635 1447 aa27.13■■□□□ 1.93
CUL9-216ENST00000513904 PRAG1Q86YV5 1406 aa27.11■■□□□ 1.93
CUL9-216ENST00000513904 MED1Q15648 1581 aaPredicted RBP27.1■■□□□ 1.93
CUL9-216ENST00000513904 ADGRL3Q9HAR2 1447 aa27.1■■□□□ 1.93
CUL9-216ENST00000513904 ROBO2Q9HCK4 1378 aa27.09■■□□□ 1.93
CUL9-216ENST00000513904 PIK3C2GO75747 1445 aa27.09■■□□□ 1.93
CUL9-216ENST00000513904 MYOM2P54296 1465 aa27.06■■□□□ 1.92
CUL9-216ENST00000513904 NRXN1Q9ULB1 1477 aa27.04■■□□□ 1.92
CUL9-216ENST00000513904 NALCNQ8IZF0 1738 aa27.04■■□□□ 1.92
CUL9-216ENST00000513904 PHLPP1O60346 1717 aa27.03■■□□□ 1.92
CUL9-216ENST00000513904 MST1RQ04912 1400 aa27.03■■□□□ 1.92
CUL9-216ENST00000513904 TMEM132EQ6IEE7 984 aa27.02■■□□□ 1.92
CUL9-216ENST00000513904 ILDR2Q71H61 639 aa27.02■■□□□ 1.92
CUL9-216ENST00000513904 BRINP3Q76B58 766 aa27.02■■□□□ 1.92
CUL9-216ENST00000513904 C14orf93Q9H972 538 aaKnown RBP27.02■■□□□ 1.92
CUL9-216ENST00000513904 LRPPRCP42704 1394 aaKnown RBP27.01■■□□□ 1.91
CUL9-216ENST00000513904 STK26Q9P289 416 aa27.01■■□□□ 1.91
CUL9-216ENST00000513904 ASXL1Q8IXJ9 1541 aa27■■□□□ 1.91
CUL9-216ENST00000513904 TECPR2O15040 1411 aa26.99■■□□□ 1.91
CUL9-216ENST00000513904 ABCC11Q96J66 1382 aa26.99■■□□□ 1.91
CUL9-216ENST00000513904 CFAP70Q5T0N1 1121 aa26.98■■□□□ 1.91
CUL9-216ENST00000513904 AHDC1Q5TGY3 1603 aaPredicted RBP26.98■■□□□ 1.91
CUL9-216ENST00000513904 PHF23Q9BUL5 403 aaPredicted RBP26.96■■□□□ 1.91
CUL9-216ENST00000513904 COL16A1Q07092 1604 aaPredicted RBP26.96■■□□□ 1.91
CUL9-216ENST00000513904 YTHDC2Q9H6S0 1430 aaKnown RBP26.96■■□□□ 1.91
CUL9-216ENST00000513904 JCADQ9P266 1359 aa26.96■■□□□ 1.91
CUL9-216ENST00000513904 DCAF11Q8TEB1 546 aa26.95■■□□□ 1.9
CUL9-216ENST00000513904 LAMC1P11047 1609 aa26.94■■□□□ 1.9
CUL9-216ENST00000513904 WAPLQ7Z5K2 1190 aa26.94■■□□□ 1.9
CUL9-216ENST00000513904 STAC3Q96MF2 364 aa26.94■■□□□ 1.9
CUL9-216ENST00000513904 KDM2AQ9Y2K7 1162 aa26.94■■□□□ 1.9
CUL9-216ENST00000513904 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
CUL9-216ENST00000513904 KNDC1Q76NI1 1749 aa26.93■■□□□ 1.9
CUL9-216ENST00000513904 DHX57Q6P158 1386 aaKnown RBP26.93■■□□□ 1.9
CUL9-216ENST00000513904 SIRT1Q96EB6 747 aa26.9■■□□□ 1.9
CUL9-216ENST00000513904 PLEKHH1Q9ULM0 1364 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms