RNA–Protein interactions for RNA: ENST00000513178.1

CNGA1-206, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 3

Gene CNGA1, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-206ENST00000513178 CCDC144AA2RUR9 1427 aa23.91■■□□□ 1.42
CNGA1-206ENST00000513178 NEXMIFQ5QGS0 1516 aa23.87■■□□□ 1.41
CNGA1-206ENST00000513178 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
CNGA1-206ENST00000513178 ZNF326Q5BKZ1 582 aaKnown RBP23.86■■□□□ 1.41
CNGA1-206ENST00000513178 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
CNGA1-206ENST00000513178 PPLO60437 1756 aa23.86■■□□□ 1.41
CNGA1-206ENST00000513178 NUTM2DQ5VT03 806 aaPredicted RBP23.85■■□□□ 1.41
CNGA1-206ENST00000513178 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
CNGA1-206ENST00000513178 LTBP4Q8N2S1 1624 aa23.84■■□□□ 1.41
CNGA1-206ENST00000513178 STRCP1A6NGW2 1772 aa23.83■■□□□ 1.41
CNGA1-206ENST00000513178 IFT172Q9UG01 1749 aa23.82■■□□□ 1.4
CNGA1-206ENST00000513178 PLEKHG1Q9ULL1 1385 aa23.81■■□□□ 1.4
CNGA1-206ENST00000513178 ANKRD30BQ9BXX2 1392 aa23.79■■□□□ 1.4
CNGA1-206ENST00000513178 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
CNGA1-206ENST00000513178 BCANQ96GW7 911 aa23.79■■□□□ 1.4
CNGA1-206ENST00000513178 NRXN3Q9Y4C0 1643 aa23.79■■□□□ 1.4
CNGA1-206ENST00000513178 SPATA31E1Q6ZUB1 1445 aa23.78■■□□□ 1.4
CNGA1-206ENST00000513178 HDGFP51858 240 aaKnown RBP23.78■■□□□ 1.4
CNGA1-206ENST00000513178 SLC26A8Q96RN1 970 aa23.76■■□□□ 1.39
CNGA1-206ENST00000513178 DIP2AQ14689 1571 aa23.76■■□□□ 1.39
CNGA1-206ENST00000513178 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
CNGA1-206ENST00000513178 CPS1P31327 1500 aa23.73■■□□□ 1.39
CNGA1-206ENST00000513178 RGL3Q3MIN7 710 aa23.72■■□□□ 1.39
CNGA1-206ENST00000513178 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
CNGA1-206ENST00000513178 CHD2O14647 1828 aaKnown RBP23.72■■□□□ 1.39
CNGA1-206ENST00000513178 CERKQ8TCT0 537 aa23.71■■□□□ 1.39
CNGA1-206ENST00000513178 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
CNGA1-206ENST00000513178 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.38
CNGA1-206ENST00000513178 RPGRIP1LQ68CZ1 1315 aa23.68■■□□□ 1.38
CNGA1-206ENST00000513178 DHX57Q6P158 1386 aaKnown RBP23.67■■□□□ 1.38
CNGA1-206ENST00000513178 PCGF6Q9BYE7 350 aa23.67■■□□□ 1.38
CNGA1-206ENST00000513178 XIRP1Q702N8 1843 aaKnown RBP23.67■■□□□ 1.38
CNGA1-206ENST00000513178 LRRC7Q96NW7 1537 aa23.64■■□□□ 1.37
CNGA1-206ENST00000513178 IQSEC2Q5JU85 1478 aa23.63■■□□□ 1.37
CNGA1-206ENST00000513178 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
CNGA1-206ENST00000513178 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
CNGA1-206ENST00000513178 TBX22Q9Y458 520 aa23.62■■□□□ 1.37
CNGA1-206ENST00000513178 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
CNGA1-206ENST00000513178 MYOM2P54296 1465 aa23.62■■□□□ 1.37
CNGA1-206ENST00000513178 XRN1Q8IZH2 1706 aaKnown RBP23.62■■□□□ 1.37
CNGA1-206ENST00000513178 ADGRF5Q8IZF2 1346 aa23.61■■□□□ 1.37
CNGA1-206ENST00000513178 KCNA6P17658 529 aa23.59■■□□□ 1.37
CNGA1-206ENST00000513178 METP08581 1390 aa23.58■■□□□ 1.37
CNGA1-206ENST00000513178 PIK3C2GO75747 1445 aa23.58■■□□□ 1.36
CNGA1-206ENST00000513178 PTPRUQ92729 1446 aa23.58■■□□□ 1.36
CNGA1-206ENST00000513178 PIK3R4Q99570 1358 aa23.57■■□□□ 1.36
CNGA1-206ENST00000513178 LAMC1P11047 1609 aa23.56■■□□□ 1.36
CNGA1-206ENST00000513178 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
CNGA1-206ENST00000513178 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
CNGA1-206ENST00000513178 RBM33Q96EV2 1170 aaKnown RBP23.52■■□□□ 1.36
CNGA1-206ENST00000513178 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
CNGA1-206ENST00000513178 TMEM94Q12767 1356 aa23.52■■□□□ 1.36
CNGA1-206ENST00000513178 DCAF11Q8TEB1 546 aa23.51■■□□□ 1.35
CNGA1-206ENST00000513178 FBXO41Q8TF61 875 aa23.51■■□□□ 1.35
CNGA1-206ENST00000513178 PROSER2Q86WR7 435 aaPredicted RBP23.5■■□□□ 1.35
CNGA1-206ENST00000513178 AMOTL2Q9Y2J4 779 aa23.5■■□□□ 1.35
CNGA1-206ENST00000513178 KDM2AQ9Y2K7 1162 aa23.5■■□□□ 1.35
CNGA1-206ENST00000513178 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
CNGA1-206ENST00000513178 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
CNGA1-206ENST00000513178 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
CNGA1-206ENST00000513178 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
CNGA1-206ENST00000513178 NALCNQ8IZF0 1738 aa23.45■■□□□ 1.34
CNGA1-206ENST00000513178 PTCH1Q13635 1447 aa23.43■■□□□ 1.34
CNGA1-206ENST00000513178 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.42■■□□□ 1.34
CNGA1-206ENST00000513178 CFAP70Q5T0N1 1121 aa23.42■■□□□ 1.34
CNGA1-206ENST00000513178 TMEM132EQ6IEE7 984 aa23.41■■□□□ 1.34
CNGA1-206ENST00000513178 KIAA1210Q9ULL0 1709 aa23.4■■□□□ 1.34
CNGA1-206ENST00000513178 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
CNGA1-206ENST00000513178 C14orf93Q9H972 538 aaKnown RBP23.4■■□□□ 1.34
CNGA1-206ENST00000513178 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
CNGA1-206ENST00000513178 ADGRB1O14514 1584 aa23.4■■□□□ 1.34
CNGA1-206ENST00000513178 MSH6P52701 1360 aa23.4■■□□□ 1.34
CNGA1-206ENST00000513178 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
CNGA1-206ENST00000513178 YTHDC2Q9H6S0 1430 aaKnown RBP23.39■■□□□ 1.33
CNGA1-206ENST00000513178 L3MBTL2Q969R5 705 aa23.38■■□□□ 1.33
CNGA1-206ENST00000513178 STK26Q9P289 416 aa23.38■■□□□ 1.33
CNGA1-206ENST00000513178 LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
CNGA1-206ENST00000513178 SCAF1Q9H7N4 1312 aaKnown RBP23.37■■□□□ 1.33
CNGA1-206ENST00000513178 STAC3Q96MF2 364 aa23.37■■□□□ 1.33
CNGA1-206ENST00000513178 TECPR2O15040 1411 aa23.36■■□□□ 1.33
CNGA1-206ENST00000513178 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
CNGA1-206ENST00000513178 TOM1O60784 492 aa23.36■■□□□ 1.33
CNGA1-206ENST00000513178 PIP4K2BP78356 416 aa23.36■■□□□ 1.33
CNGA1-206ENST00000513178 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
CNGA1-206ENST00000513178 ADGRL3Q9HAR2 1447 aa23.33■■□□□ 1.33
CNGA1-206ENST00000513178 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.33
CNGA1-206ENST00000513178 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.32
CNGA1-206ENST00000513178 ROBO1Q9Y6N7 1651 aa23.32■■□□□ 1.32
CNGA1-206ENST00000513178 ABCC11Q96J66 1382 aa23.31■■□□□ 1.32
CNGA1-206ENST00000513178 PLEKHH1Q9ULM0 1364 aa23.29■■□□□ 1.32
CNGA1-206ENST00000513178 DLC1Q96QB1 1528 aa23.29■■□□□ 1.32
CNGA1-206ENST00000513178 DCCP43146 1447 aa23.28■■□□□ 1.32
CNGA1-206ENST00000513178 C19orf44Q9H6X5 657 aa23.28■■□□□ 1.32
CNGA1-206ENST00000513178 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
CNGA1-206ENST00000513178 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
CNGA1-206ENST00000513178 ATF3P18847 181 aa23.26■■□□□ 1.31
CNGA1-206ENST00000513178 CCER1Q8TC90 406 aaPredicted RBP23.26■■□□□ 1.31
CNGA1-206ENST00000513178 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
CNGA1-206ENST00000513178 CADPS2Q86UW7 1296 aa23.24■■□□□ 1.31
CNGA1-206ENST00000513178 TRAK1Q9UPV9 953 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms