RNA–Protein interactions for RNA: ENST00000513161.1

NECAP2-212, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-212ENST00000513161 CPS1P31327 1500 aa19.34■□□□□ 0.69
NECAP2-212ENST00000513161 ZNF326Q5BKZ1 582 aaKnown RBP19.33■□□□□ 0.68
NECAP2-212ENST00000513161 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.68
NECAP2-212ENST00000513161 TMEM131LA2VDJ0 1609 aa19.33■□□□□ 0.68
NECAP2-212ENST00000513161 SPHKAPQ2M3C7 1700 aa19.31■□□□□ 0.68
NECAP2-212ENST00000513161 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
NECAP2-212ENST00000513161 TOM1O60784 492 aa19.28■□□□□ 0.68
NECAP2-212ENST00000513161 ZFYVE9O95405 1425 aa19.27■□□□□ 0.68
NECAP2-212ENST00000513161 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
NECAP2-212ENST00000513161 FOXD1Q16676 465 aa19.27■□□□□ 0.68
NECAP2-212ENST00000513161 MPHOSPH9Q99550 1183 aa19.27■□□□□ 0.68
NECAP2-212ENST00000513161 ACIN1Q9UKV3 1341 aaKnown RBP19.26■□□□□ 0.67
NECAP2-212ENST00000513161 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
NECAP2-212ENST00000513161 PLEKHG1Q9ULL1 1385 aa19.26■□□□□ 0.67
NECAP2-212ENST00000513161 KCNA6P17658 529 aa19.25■□□□□ 0.67
NECAP2-212ENST00000513161 STRCP1A6NGW2 1772 aa19.24■□□□□ 0.67
NECAP2-212ENST00000513161 PROSER2Q86WR7 435 aaPredicted RBP19.23■□□□□ 0.67
NECAP2-212ENST00000513161 TRPM2O94759 1503 aa19.22■□□□□ 0.67
NECAP2-212ENST00000513161 LRRC7Q96NW7 1537 aa19.22■□□□□ 0.67
NECAP2-212ENST00000513161 TBX22Q9Y458 520 aa19.22■□□□□ 0.67
NECAP2-212ENST00000513161 CLTCL1P53675 1640 aa19.21■□□□□ 0.67
NECAP2-212ENST00000513161 KIF1BO60333 1816 aa19.21■□□□□ 0.67
NECAP2-212ENST00000513161 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
NECAP2-212ENST00000513161 RBM33Q96EV2 1170 aaKnown RBP19.19■□□□□ 0.66
NECAP2-212ENST00000513161 VGFO15240 615 aaPredicted RBP19.15■□□□□ 0.66
NECAP2-212ENST00000513161 RGL3Q3MIN7 710 aa19.15■□□□□ 0.66
NECAP2-212ENST00000513161 TMEM94Q12767 1356 aa19.15■□□□□ 0.66
NECAP2-212ENST00000513161 CCDC144AA2RUR9 1427 aa19.15■□□□□ 0.66
NECAP2-212ENST00000513161 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
NECAP2-212ENST00000513161 ADAMTS13Q76LX8 1427 aa19.14■□□□□ 0.65
NECAP2-212ENST00000513161 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
NECAP2-212ENST00000513161 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
NECAP2-212ENST00000513161 AMOTL2Q9Y2J4 779 aa19.11■□□□□ 0.65
NECAP2-212ENST00000513161 NKTRP30414 1462 aaKnown RBP19.1■□□□□ 0.65
NECAP2-212ENST00000513161 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
NECAP2-212ENST00000513161 DIP2AQ14689 1571 aa19.1■□□□□ 0.65
NECAP2-212ENST00000513161 NEXMIFQ5QGS0 1516 aa19.1■□□□□ 0.65
NECAP2-212ENST00000513161 XIRP1Q702N8 1843 aaKnown RBP19.09■□□□□ 0.65
NECAP2-212ENST00000513161 HSPA1LP34931 641 aa19.09■□□□□ 0.65
NECAP2-212ENST00000513161 MSH6P52701 1360 aa19.08■□□□□ 0.65
NECAP2-212ENST00000513161 NWD1Q149M9 1564 aa19.08■□□□□ 0.65
NECAP2-212ENST00000513161 HRCP23327 699 aa19.08■□□□□ 0.64
NECAP2-212ENST00000513161 SETBP1Q9Y6X0 1596 aa19.06■□□□□ 0.64
NECAP2-212ENST00000513161 METP08581 1390 aa19.05■□□□□ 0.64
NECAP2-212ENST00000513161 NRXN3Q9Y4C0 1643 aa19.03■□□□□ 0.64
NECAP2-212ENST00000513161 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
NECAP2-212ENST00000513161 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
NECAP2-212ENST00000513161 ATF3P18847 181 aa19.02■□□□□ 0.64
NECAP2-212ENST00000513161 C19orf44Q9H6X5 657 aa19.01■□□□□ 0.63
NECAP2-212ENST00000513161 SLAIN2Q9P270 581 aa19.01■□□□□ 0.63
NECAP2-212ENST00000513161 PPLO60437 1756 aa19.01■□□□□ 0.63
NECAP2-212ENST00000513161 ADGRF5Q8IZF2 1346 aa19■□□□□ 0.63
NECAP2-212ENST00000513161 SPATA31E1Q6ZUB1 1445 aa19■□□□□ 0.63
NECAP2-212ENST00000513161 ANKRD30BQ9BXX2 1392 aa19■□□□□ 0.63
NECAP2-212ENST00000513161 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
NECAP2-212ENST00000513161 DISP3Q9P2K9 1392 aa18.98■□□□□ 0.63
NECAP2-212ENST00000513161 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
NECAP2-212ENST00000513161 FAM135BQ49AJ0 1406 aa18.96■□□□□ 0.63
NECAP2-212ENST00000513161 STK26Q9P289 416 aa18.94■□□□□ 0.62
NECAP2-212ENST00000513161 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
NECAP2-212ENST00000513161 KDM2AQ9Y2K7 1162 aa18.93■□□□□ 0.62
NECAP2-212ENST00000513161 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.92■□□□□ 0.62
NECAP2-212ENST00000513161 TMEM132EQ6IEE7 984 aa18.92■□□□□ 0.62
NECAP2-212ENST00000513161 DCAF11Q8TEB1 546 aa18.91■□□□□ 0.62
NECAP2-212ENST00000513161 ROBO1Q9Y6N7 1651 aa18.91■□□□□ 0.62
NECAP2-212ENST00000513161 IFT172Q9UG01 1749 aa18.9■□□□□ 0.62
NECAP2-212ENST00000513161 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
NECAP2-212ENST00000513161 ROBO2Q9HCK4 1378 aa18.88■□□□□ 0.61
NECAP2-212ENST00000513161 PIK3C2GO75747 1445 aa18.87■□□□□ 0.61
NECAP2-212ENST00000513161 CFAP70Q5T0N1 1121 aa18.87■□□□□ 0.61
NECAP2-212ENST00000513161 C14orf93Q9H972 538 aaKnown RBP18.87■□□□□ 0.61
NECAP2-212ENST00000513161 DCCP43146 1447 aa18.85■□□□□ 0.61
NECAP2-212ENST00000513161 PTCH1Q13635 1447 aa18.85■□□□□ 0.61
NECAP2-212ENST00000513161 ADGRL3Q9HAR2 1447 aa18.85■□□□□ 0.61
NECAP2-212ENST00000513161 TRIM26Q12899 539 aaPredicted RBP18.85■□□□□ 0.61
NECAP2-212ENST00000513161 WAPLQ7Z5K2 1190 aa18.84■□□□□ 0.61
NECAP2-212ENST00000513161 MYOM2P54296 1465 aa18.84■□□□□ 0.61
NECAP2-212ENST00000513161 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
NECAP2-212ENST00000513161 DHX57Q6P158 1386 aaKnown RBP18.83■□□□□ 0.61
NECAP2-212ENST00000513161 BRINP3Q76B58 766 aa18.83■□□□□ 0.6
NECAP2-212ENST00000513161 STAC3Q96MF2 364 aa18.83■□□□□ 0.6
NECAP2-212ENST00000513161 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
NECAP2-212ENST00000513161 ABCC11Q96J66 1382 aa18.81■□□□□ 0.6
NECAP2-212ENST00000513161 PHLPP1O60346 1717 aa18.81■□□□□ 0.6
NECAP2-212ENST00000513161 YTHDC2Q9H6S0 1430 aaKnown RBP18.81■□□□□ 0.6
NECAP2-212ENST00000513161 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
NECAP2-212ENST00000513161 MST1RQ04912 1400 aa18.8■□□□□ 0.6
NECAP2-212ENST00000513161 NRXN1Q9ULB1 1477 aa18.79■□□□□ 0.6
NECAP2-212ENST00000513161 MED1Q15648 1581 aaPredicted RBP18.79■□□□□ 0.6
NECAP2-212ENST00000513161 PRAG1Q86YV5 1406 aa18.78■□□□□ 0.6
NECAP2-212ENST00000513161 NEUROD1Q13562 356 aa18.77■□□□□ 0.6
NECAP2-212ENST00000513161 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
NECAP2-212ENST00000513161 POGKQ9P215 609 aa18.77■□□□□ 0.6
NECAP2-212ENST00000513161 ASXL1Q8IXJ9 1541 aa18.77■□□□□ 0.6
NECAP2-212ENST00000513161 LAMC1P11047 1609 aa18.77■□□□□ 0.6
NECAP2-212ENST00000513161 TECPR2O15040 1411 aa18.76■□□□□ 0.59
NECAP2-212ENST00000513161 NUTM2FA1L443 756 aa18.76■□□□□ 0.59
NECAP2-212ENST00000513161 SIRT1Q96EB6 747 aa18.76■□□□□ 0.59
NECAP2-212ENST00000513161 TRAK1Q9UPV9 953 aa18.76■□□□□ 0.59
NECAP2-212ENST00000513161 JCADQ9P266 1359 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms