RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 RIMS2Q9UQ26 1411 aa25.57■■□□□ 1.68
DDR1-270ENST00000513043 NUTM2DQ5VT03 806 aaPredicted RBP25.57■■□□□ 1.68
DDR1-270ENST00000513043 KIF1BO60333 1816 aa25.56■■□□□ 1.68
DDR1-270ENST00000513043 NPHP4O75161 1426 aaPredicted RBP25.55■■□□□ 1.68
DDR1-270ENST00000513043 ANKRD30BQ9BXX2 1392 aa25.55■■□□□ 1.68
DDR1-270ENST00000513043 ZFYVE9O95405 1425 aa25.54■■□□□ 1.68
DDR1-270ENST00000513043 PPP1R15AO75807 674 aaPredicted RBP25.54■■□□□ 1.68
DDR1-270ENST00000513043 MED14O60244 1454 aa25.52■■□□□ 1.68
DDR1-270ENST00000513043 CERKQ8TCT0 537 aa25.51■■□□□ 1.67
DDR1-270ENST00000513043 IQGAP1P46940 1657 aa25.5■■□□□ 1.67
DDR1-270ENST00000513043 HDGFP51858 240 aaKnown RBP25.5■■□□□ 1.67
DDR1-270ENST00000513043 RGL3Q3MIN7 710 aa25.5■■□□□ 1.67
DDR1-270ENST00000513043 BCANQ96GW7 911 aa25.5■■□□□ 1.67
DDR1-270ENST00000513043 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.49■■□□□ 1.67
DDR1-270ENST00000513043 DHX57Q6P158 1386 aaKnown RBP25.47■■□□□ 1.67
DDR1-270ENST00000513043 SPATA31E1Q6ZUB1 1445 aa25.46■■□□□ 1.67
DDR1-270ENST00000513043 NEXMIFQ5QGS0 1516 aa25.44■■□□□ 1.66
DDR1-270ENST00000513043 SLC26A8Q96RN1 970 aa25.44■■□□□ 1.66
DDR1-270ENST00000513043 ZNF335Q9H4Z2 1342 aaPredicted RBP25.43■■□□□ 1.66
DDR1-270ENST00000513043 PLEKHG1Q9ULL1 1385 aa25.43■■□□□ 1.66
DDR1-270ENST00000513043 RPGRIP1LQ68CZ1 1315 aa25.39■■□□□ 1.66
DDR1-270ENST00000513043 PPLO60437 1756 aa25.36■■□□□ 1.65
DDR1-270ENST00000513043 VGFO15240 615 aaPredicted RBP25.36■■□□□ 1.65
DDR1-270ENST00000513043 LTBP4Q8N2S1 1624 aa25.35■■□□□ 1.65
DDR1-270ENST00000513043 SIN3AQ96ST3 1273 aa25.35■■□□□ 1.65
DDR1-270ENST00000513043 ADAMTS13Q76LX8 1427 aa25.33■■□□□ 1.65
DDR1-270ENST00000513043 NEUROD1Q13562 356 aa25.32■■□□□ 1.64
DDR1-270ENST00000513043 ADGRF5Q8IZF2 1346 aa25.32■■□□□ 1.64
DDR1-270ENST00000513043 NRXN3Q9Y4C0 1643 aa25.3■■□□□ 1.64
DDR1-270ENST00000513043 IFT172Q9UG01 1749 aa25.3■■□□□ 1.64
DDR1-270ENST00000513043 SETBP1Q9Y6X0 1596 aa25.3■■□□□ 1.64
DDR1-270ENST00000513043 TBX22Q9Y458 520 aa25.29■■□□□ 1.64
DDR1-270ENST00000513043 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
DDR1-270ENST00000513043 DCAF11Q8TEB1 546 aa25.27■■□□□ 1.64
DDR1-270ENST00000513043 STRCP1A6NGW2 1772 aa25.26■■□□□ 1.63
DDR1-270ENST00000513043 DIP2AQ14689 1571 aa25.26■■□□□ 1.63
DDR1-270ENST00000513043 KCNA6P17658 529 aa25.23■■□□□ 1.63
DDR1-270ENST00000513043 MYOM2P54296 1465 aa25.22■■□□□ 1.63
DDR1-270ENST00000513043 METP08581 1390 aa25.22■■□□□ 1.63
DDR1-270ENST00000513043 CPS1P31327 1500 aa25.22■■□□□ 1.63
DDR1-270ENST00000513043 ALKQ9UM73 1620 aa25.21■■□□□ 1.63
DDR1-270ENST00000513043 PIK3C2GO75747 1445 aa25.2■■□□□ 1.62
DDR1-270ENST00000513043 IQSEC2Q5JU85 1478 aa25.19■■□□□ 1.62
DDR1-270ENST00000513043 PTPRUQ92729 1446 aa25.19■■□□□ 1.62
DDR1-270ENST00000513043 NWD1Q149M9 1564 aa25.18■■□□□ 1.62
DDR1-270ENST00000513043 CHD2O14647 1828 aaKnown RBP25.17■■□□□ 1.62
DDR1-270ENST00000513043 NRXN1Q9ULB1 1477 aa25.17■■□□□ 1.62
DDR1-270ENST00000513043 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
DDR1-270ENST00000513043 RBM33Q96EV2 1170 aaKnown RBP25.17■■□□□ 1.62
DDR1-270ENST00000513043 AMOTL2Q9Y2J4 779 aa25.17■■□□□ 1.62
DDR1-270ENST00000513043 PIK3R4Q99570 1358 aa25.17■■□□□ 1.62
DDR1-270ENST00000513043 SETD1AO15047 1707 aaKnown RBP25.16■■□□□ 1.62
DDR1-270ENST00000513043 LRRC7Q96NW7 1537 aa25.16■■□□□ 1.62
DDR1-270ENST00000513043 CFAP70Q5T0N1 1121 aa25.15■■□□□ 1.62
DDR1-270ENST00000513043 PROSER2Q86WR7 435 aaPredicted RBP25.15■■□□□ 1.62
DDR1-270ENST00000513043 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
DDR1-270ENST00000513043 TMEM132EQ6IEE7 984 aa25.13■■□□□ 1.61
DDR1-270ENST00000513043 NKTRP30414 1462 aaKnown RBP25.13■■□□□ 1.61
DDR1-270ENST00000513043 C14orf93Q9H972 538 aaKnown RBP25.12■■□□□ 1.61
DDR1-270ENST00000513043 STAC3Q96MF2 364 aa25.11■■□□□ 1.61
DDR1-270ENST00000513043 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
DDR1-270ENST00000513043 XRN1Q8IZH2 1706 aaKnown RBP25.09■■□□□ 1.61
DDR1-270ENST00000513043 TONSLQ96HA7 1378 aa25.09■■□□□ 1.61
DDR1-270ENST00000513043 ASXL1Q8IXJ9 1541 aa25.09■■□□□ 1.61
DDR1-270ENST00000513043 STK26Q9P289 416 aa25.09■■□□□ 1.61
DDR1-270ENST00000513043 LAMC1P11047 1609 aa25.05■■□□□ 1.6
DDR1-270ENST00000513043 PRAG1Q86YV5 1406 aa25.05■■□□□ 1.6
DDR1-270ENST00000513043 XIRP1Q702N8 1843 aaKnown RBP25.05■■□□□ 1.6
DDR1-270ENST00000513043 C14orf37Q86TY3 774 aa25.04■■□□□ 1.6
DDR1-270ENST00000513043 CLSPNQ9HAW4 1339 aa25.03■■□□□ 1.6
DDR1-270ENST00000513043 ROBO2Q9HCK4 1378 aa25.03■■□□□ 1.6
DDR1-270ENST00000513043 UBAP1LF5GYI3 381 aa25.02■■□□□ 1.6
DDR1-270ENST00000513043 LRPPRCP42704 1394 aaKnown RBP25.02■■□□□ 1.6
DDR1-270ENST00000513043 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
DDR1-270ENST00000513043 ADGRB1O14514 1584 aa24.98■■□□□ 1.59
DDR1-270ENST00000513043 PTCH1Q13635 1447 aa24.98■■□□□ 1.59
DDR1-270ENST00000513043 ABCC11Q96J66 1382 aa24.97■■□□□ 1.59
DDR1-270ENST00000513043 NBPF1Q3BBV0 1214 aa24.97■■□□□ 1.59
DDR1-270ENST00000513043 MSH6P52701 1360 aa24.96■■□□□ 1.59
DDR1-270ENST00000513043 NBPF8Q3BBV2 869 aa24.96■■□□□ 1.59
DDR1-270ENST00000513043 TECPR2O15040 1411 aa24.95■■□□□ 1.59
DDR1-270ENST00000513043 WAPLQ7Z5K2 1190 aa24.95■■□□□ 1.58
DDR1-270ENST00000513043 TRAK1Q9UPV9 953 aa24.95■■□□□ 1.58
DDR1-270ENST00000513043 TOM1O60784 492 aa24.94■■□□□ 1.58
DDR1-270ENST00000513043 PLEKHH1Q9ULM0 1364 aa24.93■■□□□ 1.58
DDR1-270ENST00000513043 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
DDR1-270ENST00000513043 PIP4K2BP78356 416 aa24.93■■□□□ 1.58
DDR1-270ENST00000513043 NCOA3Q9Y6Q9 1424 aa24.93■■□□□ 1.58
DDR1-270ENST00000513043 KNDC1Q76NI1 1749 aa24.92■■□□□ 1.58
DDR1-270ENST00000513043 KIAA1210Q9ULL0 1709 aa24.92■■□□□ 1.58
DDR1-270ENST00000513043 SAFB2Q14151 953 aaKnown RBP eCLIP24.91■■□□□ 1.58
DDR1-270ENST00000513043 C19orf44Q9H6X5 657 aa24.91■■□□□ 1.58
DDR1-270ENST00000513043 TRPM1Q7Z4N2 1603 aa24.9■■□□□ 1.58
DDR1-270ENST00000513043 ADGRL3Q9HAR2 1447 aa24.89■■□□□ 1.58
DDR1-270ENST00000513043 PRAM1Q96QH2 718 aa24.89■■□□□ 1.58
DDR1-270ENST00000513043 NALCNQ8IZF0 1738 aa24.89■■□□□ 1.57
DDR1-270ENST00000513043 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.89■■□□□ 1.57
DDR1-270ENST00000513043 ATF3P18847 181 aa24.88■■□□□ 1.57
DDR1-270ENST00000513043 POGKQ9P215 609 aa24.88■■□□□ 1.57
DDR1-270ENST00000513043 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms