RNA–Protein interactions for RNA: ENST00000512537.1

ACSF2-222, Transcript of acyl-CoA synthetase family member 2, human

TSL 2

Gene ACSF2, Length 483 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-222	ENST00000512537	CHGA	P10645	457 aa	Known RBP	18.83	■□□□□ 0.6
ACSF2-222	ENST00000512537	SLC26A8	Q96RN1	970 aa		18.83	■□□□□ 0.6
ACSF2-222	ENST00000512537	KCNA6	P17658	529 aa		18.82	■□□□□ 0.6
ACSF2-222	ENST00000512537	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
ACSF2-222	ENST00000512537	SPHKAP	Q2M3C7	1700 aa		18.82	■□□□□ 0.6
ACSF2-222	ENST00000512537	ALK	Q9UM73	1620 aa		18.82	■□□□□ 0.6
ACSF2-222	ENST00000512537	SCAF1	Q9H7N4	1312 aa	Known RBP	18.81	■□□□□ 0.6
ACSF2-222	ENST00000512537	PIP4K2B	P78356	416 aa		18.81	■□□□□ 0.6
ACSF2-222	ENST00000512537	BCAN	Q96GW7	911 aa		18.8	■□□□□ 0.6
ACSF2-222	ENST00000512537	NWD1	Q149M9	1564 aa		18.8	■□□□□ 0.6
ACSF2-222	ENST00000512537	NKTR	P30414	1462 aa	Known RBP	18.79	■□□□□ 0.6
ACSF2-222	ENST00000512537	TRPM2	O94759	1503 aa		18.78	■□□□□ 0.6
ACSF2-222	ENST00000512537	TMEM94	Q12767	1356 aa		18.77	■□□□□ 0.6
ACSF2-222	ENST00000512537	TRIM52	Q96A61	297 aa		18.76	■□□□□ 0.59
ACSF2-222	ENST00000512537	XIRP1	Q702N8	1843 aa	Known RBP	18.76	■□□□□ 0.59
ACSF2-222	ENST00000512537	DIP2A	Q14689	1571 aa		18.76	■□□□□ 0.59
ACSF2-222	ENST00000512537	HSPA1L	P34931	641 aa		18.75	■□□□□ 0.59
ACSF2-222	ENST00000512537	TBX22	Q9Y458	520 aa		18.75	■□□□□ 0.59
ACSF2-222	ENST00000512537	ADAMTS13	Q76LX8	1427 aa		18.74	■□□□□ 0.59
ACSF2-222	ENST00000512537	DISP3	Q9P2K9	1392 aa		18.74	■□□□□ 0.59
ACSF2-222	ENST00000512537	PROSER2	Q86WR7	435 aa	Predicted RBP	18.74	■□□□□ 0.59
ACSF2-222	ENST00000512537	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.73	■□□□□ 0.59
ACSF2-222	ENST00000512537	CLTCL1	P53675	1640 aa		18.73	■□□□□ 0.59
ACSF2-222	ENST00000512537	PIK3R4	Q99570	1358 aa		18.72	■□□□□ 0.59
ACSF2-222	ENST00000512537	SENP3	Q9H4L4	574 aa	Predicted RBP	18.72	■□□□□ 0.59
ACSF2-222	ENST00000512537	CHD2	O14647	1828 aa	Known RBP	18.72	■□□□□ 0.59
ACSF2-222	ENST00000512537	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.71	■□□□□ 0.59
ACSF2-222	ENST00000512537	ZNF326	Q5BKZ1	582 aa	Known RBP	18.69	■□□□□ 0.58
ACSF2-222	ENST00000512537	SETBP1	Q9Y6X0	1596 aa		18.68	■□□□□ 0.58
ACSF2-222	ENST00000512537	MSH6	P52701	1360 aa		18.67	■□□□□ 0.58
ACSF2-222	ENST00000512537	NCOA3	Q9Y6Q9	1424 aa		18.66	■□□□□ 0.58
ACSF2-222	ENST00000512537	NEXMIF	Q5QGS0	1516 aa		18.66	■□□□□ 0.58
ACSF2-222	ENST00000512537	KIF1B	O60333	1816 aa		18.66	■□□□□ 0.58
ACSF2-222	ENST00000512537	RBM33	Q96EV2	1170 aa	Known RBP	18.66	■□□□□ 0.58
ACSF2-222	ENST00000512537	FAM135B	Q49AJ0	1406 aa		18.66	■□□□□ 0.58
ACSF2-222	ENST00000512537	NRXN3	Q9Y4C0	1643 aa		18.65	■□□□□ 0.58
ACSF2-222	ENST00000512537	ACIN1	Q9UKV3	1341 aa	Known RBP	18.64	■□□□□ 0.57
ACSF2-222	ENST00000512537	PTPRU	Q92729	1446 aa		18.61	■□□□□ 0.57
ACSF2-222	ENST00000512537	MED1	Q15648	1581 aa	Predicted RBP	18.6	■□□□□ 0.57
ACSF2-222	ENST00000512537	SETD5	Q9C0A6	1442 aa		18.6	■□□□□ 0.57
ACSF2-222	ENST00000512537	RPGRIP1L	Q68CZ1	1315 aa		18.6	■□□□□ 0.57
ACSF2-222	ENST00000512537	MPHOSPH9	Q99550	1183 aa		18.6	■□□□□ 0.57
ACSF2-222	ENST00000512537	AMOTL2	Q9Y2J4	779 aa		18.6	■□□□□ 0.57
ACSF2-222	ENST00000512537	XRN1	Q8IZH2	1706 aa	Known RBP	18.6	■□□□□ 0.57
ACSF2-222	ENST00000512537	ROBO1	Q9Y6N7	1651 aa		18.58	■□□□□ 0.57
ACSF2-222	ENST00000512537	VGF	O15240	615 aa	Predicted RBP	18.58	■□□□□ 0.56
ACSF2-222	ENST00000512537	FOXD1	Q16676	465 aa		18.58	■□□□□ 0.56
ACSF2-222	ENST00000512537	C14orf37	Q86TY3	774 aa		18.58	■□□□□ 0.56
ACSF2-222	ENST00000512537	CCDC144A	A2RUR9	1427 aa		18.57	■□□□□ 0.56
ACSF2-222	ENST00000512537	MET	P08581	1390 aa		18.57	■□□□□ 0.56
ACSF2-222	ENST00000512537	SLAIN2	Q9P270	581 aa		18.57	■□□□□ 0.56
ACSF2-222	ENST00000512537	ILDR2	Q71H61	639 aa		18.56	■□□□□ 0.56
ACSF2-222	ENST00000512537	C19orf44	Q9H6X5	657 aa		18.56	■□□□□ 0.56
ACSF2-222	ENST00000512537	CADPS2	Q86UW7	1296 aa		18.54	■□□□□ 0.56
ACSF2-222	ENST00000512537	PPL	O60437	1756 aa		18.53	■□□□□ 0.56
ACSF2-222	ENST00000512537	DCC	P43146	1447 aa		18.53	■□□□□ 0.56
ACSF2-222	ENST00000512537	SPATA31E1	Q6ZUB1	1445 aa		18.53	■□□□□ 0.56
ACSF2-222	ENST00000512537	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.53	■□□□□ 0.56
ACSF2-222	ENST00000512537	ATF3	P18847	181 aa		18.52	■□□□□ 0.56
ACSF2-222	ENST00000512537	RAB3GAP2	Q9H2M9	1393 aa		18.52	■□□□□ 0.55
ACSF2-222	ENST00000512537	SETD1A	O15047	1707 aa	Known RBP	18.51	■□□□□ 0.55
ACSF2-222	ENST00000512537	PTCH1	Q13635	1447 aa		18.49	■□□□□ 0.55
ACSF2-222	ENST00000512537	PRAG1	Q86YV5	1406 aa		18.49	■□□□□ 0.55
ACSF2-222	ENST00000512537	ANKRD30B	Q9BXX2	1392 aa		18.48	■□□□□ 0.55
ACSF2-222	ENST00000512537	ADGRL3	Q9HAR2	1447 aa		18.48	■□□□□ 0.55
ACSF2-222	ENST00000512537	PHF23	Q9BUL5	403 aa	Predicted RBP	18.47	■□□□□ 0.55
ACSF2-222	ENST00000512537	PHLPP1	O60346	1717 aa		18.46	■□□□□ 0.55
ACSF2-222	ENST00000512537	SOCS7	O14512	581 aa		18.45	■□□□□ 0.54
ACSF2-222	ENST00000512537	RGL3	Q3MIN7	710 aa		18.45	■□□□□ 0.54
ACSF2-222	ENST00000512537	IFT172	Q9UG01	1749 aa		18.45	■□□□□ 0.54
ACSF2-222	ENST00000512537	ADGRF5	Q8IZF2	1346 aa		18.45	■□□□□ 0.54
ACSF2-222	ENST00000512537	COL16A1	Q07092	1604 aa	Predicted RBP	18.44	■□□□□ 0.54
ACSF2-222	ENST00000512537	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.44	■□□□□ 0.54
ACSF2-222	ENST00000512537	ROBO2	Q9HCK4	1378 aa		18.43	■□□□□ 0.54
ACSF2-222	ENST00000512537	MST1R	Q04912	1400 aa		18.43	■□□□□ 0.54
ACSF2-222	ENST00000512537	HRC	P23327	699 aa		18.43	■□□□□ 0.54
ACSF2-222	ENST00000512537	NALCN	Q8IZF0	1738 aa		18.43	■□□□□ 0.54
ACSF2-222	ENST00000512537	JCAD	Q9P266	1359 aa		18.42	■□□□□ 0.54
ACSF2-222	ENST00000512537	PIK3C2G	O75747	1445 aa		18.41	■□□□□ 0.54
ACSF2-222	ENST00000512537	BRINP3	Q76B58	766 aa		18.41	■□□□□ 0.54
ACSF2-222	ENST00000512537	ASXL1	Q8IXJ9	1541 aa		18.4	■□□□□ 0.54
ACSF2-222	ENST00000512537	TECPR2	O15040	1411 aa		18.38	■□□□□ 0.53
ACSF2-222	ENST00000512537	MYOM2	P54296	1465 aa		18.38	■□□□□ 0.53
ACSF2-222	ENST00000512537	LRPPRC	P42704	1394 aa	Known RBP	18.37	■□□□□ 0.53
ACSF2-222	ENST00000512537	NRXN1	Q9ULB1	1477 aa		18.37	■□□□□ 0.53
ACSF2-222	ENST00000512537	C1orf167	Q5SNV9	1468 aa		18.35	■□□□□ 0.53
ACSF2-222	ENST00000512537	NHSL1	Q5SYE7	1610 aa		18.34	■□□□□ 0.53
ACSF2-222	ENST00000512537	ABCC11	Q96J66	1382 aa		18.34	■□□□□ 0.53
ACSF2-222	ENST00000512537	SPATA31A6	Q5VVP1	1343 aa		18.34	■□□□□ 0.53
ACSF2-222	ENST00000512537	KNDC1	Q76NI1	1749 aa		18.33	■□□□□ 0.52
ACSF2-222	ENST00000512537	C14orf93	Q9H972	538 aa	Known RBP	18.33	■□□□□ 0.52
ACSF2-222	ENST00000512537	RGS17	Q9UGC6	210 aa	Predicted RBP	18.33	■□□□□ 0.52
ACSF2-222	ENST00000512537	SHPRH	Q149N8	1683 aa		18.33	■□□□□ 0.52
ACSF2-222	ENST00000512537	LAMC1	P11047	1609 aa		18.33	■□□□□ 0.52
ACSF2-222	ENST00000512537	CDC42BPG	Q6DT37	1551 aa		18.33	■□□□□ 0.52
ACSF2-222	ENST00000512537	STK26	Q9P289	416 aa		18.32	■□□□□ 0.52
ACSF2-222	ENST00000512537	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.32	■□□□□ 0.52
ACSF2-222	ENST00000512537	TMEM132E	Q6IEE7	984 aa		18.31	■□□□□ 0.52
ACSF2-222	ENST00000512537	LRP6	O75581	1613 aa		18.29	■□□□□ 0.52
ACSF2-222	ENST00000512537	SIRT1	Q96EB6	747 aa		18.28	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms