RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 SPHKAPQ2M3C7 1700 aa25.81■■□□□ 1.72
SNX2-211ENST00000512394 NWD1Q149M9 1564 aa25.79■■□□□ 1.72
SNX2-211ENST00000512394 HDGFP51858 240 aaKnown RBP25.79■■□□□ 1.72
SNX2-211ENST00000512394 SLC26A8Q96RN1 970 aa25.79■■□□□ 1.72
SNX2-211ENST00000512394 PLEKHG1Q9ULL1 1385 aa25.79■■□□□ 1.72
SNX2-211ENST00000512394 PPP1R15AO75807 674 aaPredicted RBP25.78■■□□□ 1.72
SNX2-211ENST00000512394 BCANQ96GW7 911 aa25.78■■□□□ 1.72
SNX2-211ENST00000512394 CHGAP10645 457 aaKnown RBP25.77■■□□□ 1.72
SNX2-211ENST00000512394 HSPA1LP34931 641 aa25.77■■□□□ 1.72
SNX2-211ENST00000512394 NAIPQ13075 1403 aa25.77■■□□□ 1.72
SNX2-211ENST00000512394 KCNA6P17658 529 aa25.76■■□□□ 1.71
SNX2-211ENST00000512394 NKTRP30414 1462 aaKnown RBP25.76■■□□□ 1.71
SNX2-211ENST00000512394 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.74■■□□□ 1.71
SNX2-211ENST00000512394 HFM1A2PYH4 1435 aa25.71■■□□□ 1.71
SNX2-211ENST00000512394 TMEM94Q12767 1356 aa25.71■■□□□ 1.71
SNX2-211ENST00000512394 CHD2O14647 1828 aaKnown RBP25.71■■□□□ 1.71
SNX2-211ENST00000512394 DIP2AQ14689 1571 aa25.7■■□□□ 1.71
SNX2-211ENST00000512394 SENP3Q9H4L4 574 aaPredicted RBP25.68■■□□□ 1.7
SNX2-211ENST00000512394 PROSER2Q86WR7 435 aaPredicted RBP25.67■■□□□ 1.7
SNX2-211ENST00000512394 TRPM2O94759 1503 aa25.67■■□□□ 1.7
SNX2-211ENST00000512394 CLTCL1P53675 1640 aa25.65■■□□□ 1.7
SNX2-211ENST00000512394 MED1Q15648 1581 aaPredicted RBP25.65■■□□□ 1.7
SNX2-211ENST00000512394 TBX22Q9Y458 520 aa25.64■■□□□ 1.7
SNX2-211ENST00000512394 ADAMTS13Q76LX8 1427 aa25.63■■□□□ 1.69
SNX2-211ENST00000512394 NUTM2DQ5VT03 806 aaPredicted RBP25.63■■□□□ 1.69
SNX2-211ENST00000512394 KIF1BO60333 1816 aa25.62■■□□□ 1.69
SNX2-211ENST00000512394 ILDR2Q71H61 639 aa25.61■■□□□ 1.69
SNX2-211ENST00000512394 PIK3R4Q99570 1358 aa25.6■■□□□ 1.69
SNX2-211ENST00000512394 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
SNX2-211ENST00000512394 MSH6P52701 1360 aa25.59■■□□□ 1.69
SNX2-211ENST00000512394 TRIM52Q96A61 297 aa25.59■■□□□ 1.69
SNX2-211ENST00000512394 SETBP1Q9Y6X0 1596 aa25.58■■□□□ 1.69
SNX2-211ENST00000512394 FAM135BQ49AJ0 1406 aa25.58■■□□□ 1.69
SNX2-211ENST00000512394 NRXN3Q9Y4C0 1643 aa25.57■■□□□ 1.68
SNX2-211ENST00000512394 ZNF326Q5BKZ1 582 aaKnown RBP25.57■■□□□ 1.68
SNX2-211ENST00000512394 ROBO1Q9Y6N7 1651 aa25.57■■□□□ 1.68
SNX2-211ENST00000512394 NCOA3Q9Y6Q9 1424 aa25.54■■□□□ 1.68
SNX2-211ENST00000512394 NEXMIFQ5QGS0 1516 aa25.54■■□□□ 1.68
SNX2-211ENST00000512394 SLC4A1APQ9BWU0 796 aaKnown RBP25.52■■□□□ 1.68
SNX2-211ENST00000512394 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
SNX2-211ENST00000512394 PTPRUQ92729 1446 aa25.47■■□□□ 1.67
SNX2-211ENST00000512394 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.47■■□□□ 1.67
SNX2-211ENST00000512394 C14orf37Q86TY3 774 aa25.47■■□□□ 1.67
SNX2-211ENST00000512394 SOCS7O14512 581 aa25.46■■□□□ 1.67
SNX2-211ENST00000512394 AMOTL2Q9Y2J4 779 aa25.46■■□□□ 1.67
SNX2-211ENST00000512394 SLAIN2Q9P270 581 aa25.45■■□□□ 1.66
SNX2-211ENST00000512394 PHLPP1O60346 1717 aa25.43■■□□□ 1.66
SNX2-211ENST00000512394 PHF23Q9BUL5 403 aaPredicted RBP25.43■■□□□ 1.66
SNX2-211ENST00000512394 PPLO60437 1756 aa25.41■■□□□ 1.66
SNX2-211ENST00000512394 C19orf44Q9H6X5 657 aa25.41■■□□□ 1.66
SNX2-211ENST00000512394 METP08581 1390 aa25.41■■□□□ 1.66
SNX2-211ENST00000512394 CADPS2Q86UW7 1296 aa25.4■■□□□ 1.66
SNX2-211ENST00000512394 ATF3P18847 181 aa25.39■■□□□ 1.66
SNX2-211ENST00000512394 RPGRIP1LQ68CZ1 1315 aa25.38■■□□□ 1.65
SNX2-211ENST00000512394 SETD1AO15047 1707 aaKnown RBP25.38■■□□□ 1.65
SNX2-211ENST00000512394 VGFO15240 615 aaPredicted RBP25.38■■□□□ 1.65
SNX2-211ENST00000512394 DCCP43146 1447 aa25.37■■□□□ 1.65
SNX2-211ENST00000512394 CCDC144AA2RUR9 1427 aa25.37■■□□□ 1.65
SNX2-211ENST00000512394 ACIN1Q9UKV3 1341 aaKnown RBP25.37■■□□□ 1.65
SNX2-211ENST00000512394 FOXD1Q16676 465 aa25.36■■□□□ 1.65
SNX2-211ENST00000512394 MPHOSPH9Q99550 1183 aa25.34■■□□□ 1.65
SNX2-211ENST00000512394 COL16A1Q07092 1604 aaPredicted RBP25.34■■□□□ 1.65
SNX2-211ENST00000512394 SETD5Q9C0A6 1442 aa25.32■■□□□ 1.64
SNX2-211ENST00000512394 AHDC1Q5TGY3 1603 aaPredicted RBP25.32■■□□□ 1.64
SNX2-211ENST00000512394 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
SNX2-211ENST00000512394 IFT172Q9UG01 1749 aa25.3■■□□□ 1.64
SNX2-211ENST00000512394 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
SNX2-211ENST00000512394 ADGRL3Q9HAR2 1447 aa25.29■■□□□ 1.64
SNX2-211ENST00000512394 JCADQ9P266 1359 aa25.29■■□□□ 1.64
SNX2-211ENST00000512394 SPATA31E1Q6ZUB1 1445 aa25.27■■□□□ 1.64
SNX2-211ENST00000512394 PRAG1Q86YV5 1406 aa25.27■■□□□ 1.64
SNX2-211ENST00000512394 MST1RQ04912 1400 aa25.26■■□□□ 1.63
SNX2-211ENST00000512394 ASXL1Q8IXJ9 1541 aa25.25■■□□□ 1.63
SNX2-211ENST00000512394 BRINP3Q76B58 766 aa25.23■■□□□ 1.63
SNX2-211ENST00000512394 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
SNX2-211ENST00000512394 ANKRD30BQ9BXX2 1392 aa25.22■■□□□ 1.63
SNX2-211ENST00000512394 RAB3GAP2Q9H2M9 1393 aa25.22■■□□□ 1.63
SNX2-211ENST00000512394 NHSL1Q5SYE7 1610 aa25.22■■□□□ 1.63
SNX2-211ENST00000512394 RGL3Q3MIN7 710 aa25.21■■□□□ 1.63
SNX2-211ENST00000512394 ROBO2Q9HCK4 1378 aa25.2■■□□□ 1.63
SNX2-211ENST00000512394 RGS17Q9UGC6 210 aaPredicted RBP25.19■■□□□ 1.62
SNX2-211ENST00000512394 ADGRF5Q8IZF2 1346 aa25.18■■□□□ 1.62
SNX2-211ENST00000512394 HRCP23327 699 aa25.17■■□□□ 1.62
SNX2-211ENST00000512394 SPATA31A6Q5VVP1 1343 aa25.16■■□□□ 1.62
SNX2-211ENST00000512394 PIK3C2GO75747 1445 aa25.15■■□□□ 1.62
SNX2-211ENST00000512394 KNDC1Q76NI1 1749 aa25.14■■□□□ 1.61
SNX2-211ENST00000512394 LRP6O75581 1613 aa25.12■■□□□ 1.61
SNX2-211ENST00000512394 C1orf167Q5SNV9 1468 aa25.12■■□□□ 1.61
SNX2-211ENST00000512394 CDC42BPGQ6DT37 1551 aa25.11■■□□□ 1.61
SNX2-211ENST00000512394 LAMC1P11047 1609 aa25.11■■□□□ 1.61
SNX2-211ENST00000512394 TECPR2O15040 1411 aa25.11■■□□□ 1.61
SNX2-211ENST00000512394 MYOM2P54296 1465 aa25.1■■□□□ 1.61
SNX2-211ENST00000512394 LRPPRCP42704 1394 aaKnown RBP25.08■■□□□ 1.61
SNX2-211ENST00000512394 MEX3CQ5U5Q3 659 aaKnown RBP25.07■■□□□ 1.6
SNX2-211ENST00000512394 NRXN1Q9ULB1 1477 aa25.07■■□□□ 1.6
SNX2-211ENST00000512394 POTEAQ6S8J7 498 aa25.06■■□□□ 1.6
SNX2-211ENST00000512394 LRRC59Q96AG4 307 aaKnown RBP25.05■■□□□ 1.6
SNX2-211ENST00000512394 STK26Q9P289 416 aa25.05■■□□□ 1.6
SNX2-211ENST00000512394 ABCC11Q96J66 1382 aa25.05■■□□□ 1.6
SNX2-211ENST00000512394 YTHDC2Q9H6S0 1430 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms