RNA–Protein interactions for RNA: ENST00000512086.5

CAGE1-208, Transcript of cancer antigen 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAGE1, Length 2,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-208ENST00000512086 NKTRP30414 1462 aaKnown RBP11.39□□□□□ -0.59
CAGE1-208ENST00000512086 PLEKHG1Q9ULL1 1385 aa11.38□□□□□ -0.59
CAGE1-208ENST00000512086 DIP2AQ14689 1571 aa11.38□□□□□ -0.59
CAGE1-208ENST00000512086 NUP155O75694 1391 aa11.38□□□□□ -0.59
CAGE1-208ENST00000512086 HDGFP51858 240 aaKnown RBP11.38□□□□□ -0.59
CAGE1-208ENST00000512086 SPHKAPQ2M3C7 1700 aa11.38□□□□□ -0.59
CAGE1-208ENST00000512086 RIMS2Q9UQ26 1411 aa11.37□□□□□ -0.59
CAGE1-208ENST00000512086 NAIPQ13075 1403 aa11.36□□□□□ -0.59
CAGE1-208ENST00000512086 KCNA6P17658 529 aa11.36□□□□□ -0.59
CAGE1-208ENST00000512086 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.36□□□□□ -0.59
CAGE1-208ENST00000512086 CHD2O14647 1828 aaKnown RBP11.36□□□□□ -0.59
CAGE1-208ENST00000512086 HFM1A2PYH4 1435 aa11.35□□□□□ -0.59
CAGE1-208ENST00000512086 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
CAGE1-208ENST00000512086 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
CAGE1-208ENST00000512086 TRPM2O94759 1503 aa11.34□□□□□ -0.59
CAGE1-208ENST00000512086 DISP3Q9P2K9 1392 aa11.32□□□□□ -0.6
CAGE1-208ENST00000512086 TBX22Q9Y458 520 aa11.32□□□□□ -0.6
CAGE1-208ENST00000512086 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
CAGE1-208ENST00000512086 ADAMTS13Q76LX8 1427 aa11.31□□□□□ -0.6
CAGE1-208ENST00000512086 SETBP1Q9Y6X0 1596 aa11.31□□□□□ -0.6
CAGE1-208ENST00000512086 ITGAEP38570 1179 aa11.31□□□□□ -0.6
CAGE1-208ENST00000512086 TMEM94Q12767 1356 aa11.3□□□□□ -0.6
CAGE1-208ENST00000512086 HSPA1LP34931 641 aa11.3□□□□□ -0.6
CAGE1-208ENST00000512086 KIF1BO60333 1816 aa11.29□□□□□ -0.6
CAGE1-208ENST00000512086 CLTCL1P53675 1640 aa11.29□□□□□ -0.6
CAGE1-208ENST00000512086 PPP1R15AO75807 674 aaPredicted RBP11.29□□□□□ -0.6
CAGE1-208ENST00000512086 HRCP23327 699 aa11.29□□□□□ -0.6
CAGE1-208ENST00000512086 PIP4K2BP78356 416 aa11.29□□□□□ -0.6
CAGE1-208ENST00000512086 SLC26A8Q96RN1 970 aa11.29□□□□□ -0.6
CAGE1-208ENST00000512086 MED1Q15648 1581 aaPredicted RBP11.29□□□□□ -0.6
CAGE1-208ENST00000512086 NRXN3Q9Y4C0 1643 aa11.28□□□□□ -0.6
CAGE1-208ENST00000512086 ACIN1Q9UKV3 1341 aaKnown RBP11.28□□□□□ -0.6
CAGE1-208ENST00000512086 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.6
CAGE1-208ENST00000512086 NEXMIFQ5QGS0 1516 aa11.27□□□□□ -0.61
CAGE1-208ENST00000512086 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
CAGE1-208ENST00000512086 PROSER2Q86WR7 435 aaPredicted RBP11.27□□□□□ -0.61
CAGE1-208ENST00000512086 MSH6P52701 1360 aa11.26□□□□□ -0.61
CAGE1-208ENST00000512086 ROBO1Q9Y6N7 1651 aa11.25□□□□□ -0.61
CAGE1-208ENST00000512086 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
CAGE1-208ENST00000512086 BCANQ96GW7 911 aa11.24□□□□□ -0.61
CAGE1-208ENST00000512086 DCCP43146 1447 aa11.24□□□□□ -0.61
CAGE1-208ENST00000512086 PRAG1Q86YV5 1406 aa11.23□□□□□ -0.61
CAGE1-208ENST00000512086 PCGF6Q9BYE7 350 aa11.23□□□□□ -0.61
CAGE1-208ENST00000512086 RPGRIP1LQ68CZ1 1315 aa11.22□□□□□ -0.61
CAGE1-208ENST00000512086 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
CAGE1-208ENST00000512086 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.22□□□□□ -0.61
CAGE1-208ENST00000512086 PTPRUQ92729 1446 aa11.22□□□□□ -0.61
CAGE1-208ENST00000512086 SETD1AO15047 1707 aaKnown RBP11.22□□□□□ -0.61
CAGE1-208ENST00000512086 PPLO60437 1756 aa11.22□□□□□ -0.61
CAGE1-208ENST00000512086 SOCS7O14512 581 aa11.2□□□□□ -0.62
CAGE1-208ENST00000512086 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
CAGE1-208ENST00000512086 AHDC1Q5TGY3 1603 aaPredicted RBP11.19□□□□□ -0.62
CAGE1-208ENST00000512086 ZNF326Q5BKZ1 582 aaKnown RBP11.19□□□□□ -0.62
CAGE1-208ENST00000512086 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
CAGE1-208ENST00000512086 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
CAGE1-208ENST00000512086 PHLPP1O60346 1717 aa11.19□□□□□ -0.62
CAGE1-208ENST00000512086 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
CAGE1-208ENST00000512086 BCL11AQ9H165 835 aa11.18□□□□□ -0.62
CAGE1-208ENST00000512086 SLAIN2Q9P270 581 aa11.18□□□□□ -0.62
CAGE1-208ENST00000512086 AMOTL2Q9Y2J4 779 aa11.18□□□□□ -0.62
CAGE1-208ENST00000512086 PTCH1Q13635 1447 aa11.18□□□□□ -0.62
CAGE1-208ENST00000512086 IFT172Q9UG01 1749 aa11.18□□□□□ -0.62
CAGE1-208ENST00000512086 VGFO15240 615 aaPredicted RBP11.17□□□□□ -0.62
CAGE1-208ENST00000512086 NUTM2DQ5VT03 806 aaPredicted RBP11.17□□□□□ -0.62
CAGE1-208ENST00000512086 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
CAGE1-208ENST00000512086 METP08581 1390 aa11.17□□□□□ -0.62
CAGE1-208ENST00000512086 SPATA31E1Q6ZUB1 1445 aa11.16□□□□□ -0.62
CAGE1-208ENST00000512086 ADGRL3Q9HAR2 1447 aa11.16□□□□□ -0.62
CAGE1-208ENST00000512086 CCDC144AA2RUR9 1427 aa11.15□□□□□ -0.62
CAGE1-208ENST00000512086 DAXXQ9UER7 740 aaPredicted RBP11.15□□□□□ -0.62
CAGE1-208ENST00000512086 SETD5Q9C0A6 1442 aa11.15□□□□□ -0.62
CAGE1-208ENST00000512086 SHPRHQ149N8 1683 aa11.15□□□□□ -0.63
CAGE1-208ENST00000512086 NALCNQ8IZF0 1738 aa11.14□□□□□ -0.63
CAGE1-208ENST00000512086 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
CAGE1-208ENST00000512086 JCADQ9P266 1359 aa11.14□□□□□ -0.63
CAGE1-208ENST00000512086 ATF3P18847 181 aa11.14□□□□□ -0.63
CAGE1-208ENST00000512086 ANKRD30BQ9BXX2 1392 aa11.14□□□□□ -0.63
CAGE1-208ENST00000512086 LAMC1P11047 1609 aa11.14□□□□□ -0.63
CAGE1-208ENST00000512086 NHSL1Q5SYE7 1610 aa11.14□□□□□ -0.63
CAGE1-208ENST00000512086 MPHOSPH9Q99550 1183 aa11.13□□□□□ -0.63
CAGE1-208ENST00000512086 MST1RQ04912 1400 aa11.13□□□□□ -0.63
CAGE1-208ENST00000512086 C14orf37Q86TY3 774 aa11.12□□□□□ -0.63
CAGE1-208ENST00000512086 PHF23Q9BUL5 403 aaPredicted RBP11.12□□□□□ -0.63
CAGE1-208ENST00000512086 KNDC1Q76NI1 1749 aa11.12□□□□□ -0.63
CAGE1-208ENST00000512086 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
CAGE1-208ENST00000512086 TECPR2O15040 1411 aa11.11□□□□□ -0.63
CAGE1-208ENST00000512086 SENP3Q9H4L4 574 aaPredicted RBP11.11□□□□□ -0.63
CAGE1-208ENST00000512086 SPATA31A6Q5VVP1 1343 aa11.1□□□□□ -0.63
CAGE1-208ENST00000512086 MYOM2P54296 1465 aa11.1□□□□□ -0.63
CAGE1-208ENST00000512086 NRXN1Q9ULB1 1477 aa11.1□□□□□ -0.63
CAGE1-208ENST00000512086 CDC42BPGQ6DT37 1551 aa11.09□□□□□ -0.63
CAGE1-208ENST00000512086 BRINP3Q76B58 766 aa11.09□□□□□ -0.63
CAGE1-208ENST00000512086 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
CAGE1-208ENST00000512086 RAB3GAP2Q9H2M9 1393 aa11.08□□□□□ -0.64
CAGE1-208ENST00000512086 ROBO2Q9HCK4 1378 aa11.08□□□□□ -0.64
CAGE1-208ENST00000512086 RGS17Q9UGC6 210 aaPredicted RBP11.07□□□□□ -0.64
CAGE1-208ENST00000512086 C1orf167Q5SNV9 1468 aa11.07□□□□□ -0.64
CAGE1-208ENST00000512086 LRPPRCP42704 1394 aaKnown RBP11.07□□□□□ -0.64
CAGE1-208ENST00000512086 FOXD1Q16676 465 aa11.07□□□□□ -0.64
CAGE1-208ENST00000512086 ABCC11Q96J66 1382 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms