RNA–Protein interactions for RNA: ENST00000511270.1

PROM1-212, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-212ENST00000511270 PRXQ9BXM0 1461 aa8.93□□□□□ -0.98
PROM1-212ENST00000511270 ERICH3Q5RHP9 1530 aa8.92□□□□□ -0.98
PROM1-212ENST00000511270 CUX2O14529 1486 aa8.92□□□□□ -0.98
PROM1-212ENST00000511270 RAD54L2Q9Y4B4 1467 aa8.92□□□□□ -0.98
PROM1-212ENST00000511270 CEP162Q5TB80 1403 aa8.92□□□□□ -0.98
PROM1-212ENST00000511270 OATP04181 439 aa8.92□□□□□ -0.98
PROM1-212ENST00000511270 TK2O00142 265 aa8.91□□□□□ -0.98
PROM1-212ENST00000511270 TSKSQ9UJT2 592 aa8.91□□□□□ -0.98
PROM1-212ENST00000511270 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
PROM1-212ENST00000511270 ABCA10Q8WWZ4 1543 aa8.9□□□□□ -0.98
PROM1-212ENST00000511270 UBTFP17480 764 aaKnown RBP8.9□□□□□ -0.98
PROM1-212ENST00000511270 PACS2Q86VP3 889 aa8.9□□□□□ -0.98
PROM1-212ENST00000511270 FAM198AQ9UFP1 575 aa8.9□□□□□ -0.98
PROM1-212ENST00000511270 RABGEF1Q9UJ41 708 aa8.9□□□□□ -0.98
PROM1-212ENST00000511270 AXIN2Q9Y2T1 843 aa8.9□□□□□ -0.98
PROM1-212ENST00000511270 IGF1RP08069 1367 aa8.89□□□□□ -0.99
PROM1-212ENST00000511270 NBPF26B4DH59 902 aa8.89□□□□□ -0.99
PROM1-212ENST00000511270 LSM11P83369 360 aaKnown RBP eCLIP8.89□□□□□ -0.99
PROM1-212ENST00000511270 AMHR2Q16671 573 aa8.89□□□□□ -0.99
PROM1-212ENST00000511270 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
PROM1-212ENST00000511270 METTL3Q86U44 580 aaKnown RBP8.89□□□□□ -0.99
PROM1-212ENST00000511270 TRIM66O15016 1216 aa8.88□□□□□ -0.99
PROM1-212ENST00000511270 PROX2Q3B8N5 592 aa8.88□□□□□ -0.99
PROM1-212ENST00000511270 PXYLP1Q8TE99 480 aa8.88□□□□□ -0.99
PROM1-212ENST00000511270 VPS9D1Q9Y2B5 631 aa8.88□□□□□ -0.99
PROM1-212ENST00000511270 TARBP1Q13395 1621 aaKnown RBP8.87□□□□□ -0.99
PROM1-212ENST00000511270 POTEGQ6S5H5 508 aa8.87□□□□□ -0.99
PROM1-212ENST00000511270 RBM46Q8TBY0 533 aaKnown RBP8.87□□□□□ -0.99
PROM1-212ENST00000511270 MRC2Q9UBG0 1479 aa8.86□□□□□ -0.99
PROM1-212ENST00000511270 EYA1Q99502 592 aa8.86□□□□□ -0.99
PROM1-212ENST00000511270 ABCA5Q8WWZ7 1642 aa8.86□□□□□ -0.99
PROM1-212ENST00000511270 POTEMA6NI47 508 aa8.85□□□□□ -0.99
PROM1-212ENST00000511270 TATDN2Q93075 761 aa8.85□□□□□ -0.99
PROM1-212ENST00000511270 KIAA1468Q9P260 1216 aa8.85□□□□□ -0.99
PROM1-212ENST00000511270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -0.99
PROM1-212ENST00000511270 BHMG1C9JSJ3 638 aaPredicted RBP8.84□□□□□ -0.99
PROM1-212ENST00000511270 PDE4DQ08499 809 aa8.84□□□□□ -0.99
PROM1-212ENST00000511270 ADGRD1Q6QNK2 874 aa8.84□□□□□ -0.99
PROM1-212ENST00000511270 LAPTM4BQ86VI4 370 aa8.84□□□□□ -0.99
PROM1-212ENST00000511270 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
PROM1-212ENST00000511270 THOC2Q8NI27 1593 aaKnown RBP8.83□□□□□ -1
PROM1-212ENST00000511270 NUDT18Q6ZVK8 323 aa8.83□□□□□ -1
PROM1-212ENST00000511270 PCGF6Q9BYE7 350 aa8.83□□□□□ -1
PROM1-212ENST00000511270 KRTAP3-3Q9BYR6 98 aa8.83□□□□□ -1
PROM1-212ENST00000511270 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
PROM1-212ENST00000511270 PNMA3Q9UL41 463 aa8.83□□□□□ -1
PROM1-212ENST00000511270 CUL7Q14999 1698 aa8.83□□□□□ -1
PROM1-212ENST00000511270 WDR62O43379 1518 aa8.83□□□□□ -1
PROM1-212ENST00000511270 CARMIL1Q5VZK9 1371 aa8.83□□□□□ -1
PROM1-212ENST00000511270 PBRM1Q86U86 1689 aa8.82□□□□□ -1
PROM1-212ENST00000511270 CLIP1P30622 1438 aa8.82□□□□□ -1
PROM1-212ENST00000511270 HRO43593 1189 aa8.82□□□□□ -1
PROM1-212ENST00000511270 PHOX2BQ99453 314 aa8.82□□□□□ -1
PROM1-212ENST00000511270 C3orf80F5H4A9 247 aa8.81□□□□□ -1
PROM1-212ENST00000511270 DNAJB2P25686 324 aa8.81□□□□□ -1
PROM1-212ENST00000511270 CLCN1P35523 988 aa8.81□□□□□ -1
PROM1-212ENST00000511270 BRPF1P55201 1214 aaPredicted RBP8.81□□□□□ -1
PROM1-212ENST00000511270 TRIM26Q12899 539 aaPredicted RBP8.81□□□□□ -1
PROM1-212ENST00000511270 FAM161AQ3B820 660 aa8.81□□□□□ -1
PROM1-212ENST00000511270 TMUB1Q9BVT8 246 aa8.81□□□□□ -1
PROM1-212ENST00000511270 FAM98CQ17RN3 349 aaKnown RBP8.8□□□□□ -1
PROM1-212ENST00000511270 PARP9Q8IXQ6 854 aa8.8□□□□□ -1
PROM1-212ENST00000511270 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
PROM1-212ENST00000511270 PCDH10Q9P2E7 1040 aa8.8□□□□□ -1
PROM1-212ENST00000511270 TDRD9Q8NDG6 1382 aaKnown RBP8.8□□□□□ -1
PROM1-212ENST00000511270 CTTNBP2Q8WZ74 1663 aa8.79□□□□□ -1
PROM1-212ENST00000511270 GAPVD1Q14C86 1478 aa8.79□□□□□ -1
PROM1-212ENST00000511270 RCCD1A6NED2 376 aa8.79□□□□□ -1
PROM1-212ENST00000511270 CDAN1Q8IWY9 1227 aa8.79□□□□□ -1
PROM1-212ENST00000511270 TMEM134Q9H6X4 195 aa8.79□□□□□ -1
PROM1-212ENST00000511270 ARAP1Q96P48 1450 aa8.78□□□□□ -1
PROM1-212ENST00000511270 NEUROD2Q15784 382 aa8.78□□□□□ -1
PROM1-212ENST00000511270 PPARGC1BQ86YN6 1023 aaKnown RBP8.78□□□□□ -1
PROM1-212ENST00000511270 TTLL12Q14166 644 aaPredicted RBP8.77□□□□□ -1.01
PROM1-212ENST00000511270 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
PROM1-212ENST00000511270 ERCC6Q03468 1493 aa8.77□□□□□ -1.01
PROM1-212ENST00000511270 SMAPO00193 183 aa8.76□□□□□ -1.01
PROM1-212ENST00000511270 ANKRD13DQ6ZTN6 518 aa8.76□□□□□ -1.01
PROM1-212ENST00000511270 DAXXQ9UER7 740 aaPredicted RBP8.76□□□□□ -1.01
PROM1-212ENST00000511270 SEPT9Q9UHD8 586 aaPredicted RBP8.76□□□□□ -1.01
PROM1-212ENST00000511270 VPS8Q8N3P4 1428 aa8.76□□□□□ -1.01
PROM1-212ENST00000511270 IFT140Q96RY7 1462 aa8.76□□□□□ -1.01
PROM1-212ENST00000511270 ARHGAP35Q9NRY4 1499 aa8.76□□□□□ -1.01
PROM1-212ENST00000511270 RANGAP1P46060 587 aaPredicted RBP8.75□□□□□ -1.01
PROM1-212ENST00000511270 MDM2Q00987 491 aaPredicted RBP8.75□□□□□ -1.01
PROM1-212ENST00000511270 GIGYF2Q6Y7W6 1299 aaKnown RBP8.75□□□□□ -1.01
PROM1-212ENST00000511270 KDM4CQ9H3R0 1056 aa8.75□□□□□ -1.01
PROM1-212ENST00000511270 AQRO60306 1485 aaKnown RBP eCLIP8.75□□□□□ -1.01
PROM1-212ENST00000511270 ZNF608Q9ULD9 1512 aaPredicted RBP8.75□□□□□ -1.01
PROM1-212ENST00000511270 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
PROM1-212ENST00000511270 SULF1Q8IWU6 871 aa8.73□□□□□ -1.01
PROM1-212ENST00000511270 ZFRQ96KR1 1074 aaKnown RBP8.73□□□□□ -1.01
PROM1-212ENST00000511270 GPBP1L1Q9HC44 474 aaPredicted RBP8.73□□□□□ -1.01
PROM1-212ENST00000511270 FAM217BQ9NTX9 383 aaPredicted RBP8.73□□□□□ -1.01
PROM1-212ENST00000511270 ADAMTS12P58397 1594 aa8.73□□□□□ -1.01
PROM1-212ENST00000511270 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
PROM1-212ENST00000511270 EIF4G3O43432 1585 aaKnown RBP8.72□□□□□ -1.01
PROM1-212ENST00000511270 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
PROM1-212ENST00000511270 SWT1Q5T5J6 900 aaKnown RBP8.7□□□□□ -1.02
PROM1-212ENST00000511270 SLF2Q8IX21 1173 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms