RNA–Protein interactions for RNA: ENST00000511270.1

PROM1-212, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-212ENST00000511270 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
PROM1-212ENST00000511270 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
PROM1-212ENST00000511270 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
PROM1-212ENST00000511270 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
PROM1-212ENST00000511270 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
PROM1-212ENST00000511270 FOXD1Q16676 465 aa15.95■□□□□ 0.14
PROM1-212ENST00000511270 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
PROM1-212ENST00000511270 ADRA2BP18089 450 aa15.4■□□□□ 0.06
PROM1-212ENST00000511270 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
PROM1-212ENST00000511270 MSH5O43196 834 aa14.73□□□□□ -0.05
PROM1-212ENST00000511270 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
PROM1-212ENST00000511270 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
PROM1-212ENST00000511270 KCNA4P22459 653 aa14.17□□□□□ -0.14
PROM1-212ENST00000511270 NCBP3Q53F19 620 aaKnown RBP14.08□□□□□ -0.16
PROM1-212ENST00000511270 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
PROM1-212ENST00000511270 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
PROM1-212ENST00000511270 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
PROM1-212ENST00000511270 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
PROM1-212ENST00000511270 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
PROM1-212ENST00000511270 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
PROM1-212ENST00000511270 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
PROM1-212ENST00000511270 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
PROM1-212ENST00000511270 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
PROM1-212ENST00000511270 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
PROM1-212ENST00000511270 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
PROM1-212ENST00000511270 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
PROM1-212ENST00000511270 ZBTB22O15209 634 aa13.05□□□□□ -0.32
PROM1-212ENST00000511270 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
PROM1-212ENST00000511270 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
PROM1-212ENST00000511270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
PROM1-212ENST00000511270 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
PROM1-212ENST00000511270 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.37
PROM1-212ENST00000511270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
PROM1-212ENST00000511270 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
PROM1-212ENST00000511270 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
PROM1-212ENST00000511270 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
PROM1-212ENST00000511270 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
PROM1-212ENST00000511270 NISCHQ9Y2I1 1504 aa12.61□□□□□ -0.39
PROM1-212ENST00000511270 APLP2Q06481 763 aa12.52□□□□□ -0.41
PROM1-212ENST00000511270 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
PROM1-212ENST00000511270 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
PROM1-212ENST00000511270 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
PROM1-212ENST00000511270 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
PROM1-212ENST00000511270 CAPN15O75808 1086 aa12.21□□□□□ -0.45
PROM1-212ENST00000511270 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
PROM1-212ENST00000511270 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
PROM1-212ENST00000511270 POLA2Q14181 598 aa12.04□□□□□ -0.48
PROM1-212ENST00000511270 DSG3P32926 999 aa12.03□□□□□ -0.48
PROM1-212ENST00000511270 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
PROM1-212ENST00000511270 ABCB7O75027 752 aa11.96□□□□□ -0.49
PROM1-212ENST00000511270 FBLN2P98095 1184 aa11.9□□□□□ -0.5
PROM1-212ENST00000511270 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
PROM1-212ENST00000511270 FKBP8Q14318 412 aa11.79□□□□□ -0.52
PROM1-212ENST00000511270 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
PROM1-212ENST00000511270 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
PROM1-212ENST00000511270 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
PROM1-212ENST00000511270 SPDYE2Q495Y8 402 aa11.63□□□□□ -0.55
PROM1-212ENST00000511270 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
PROM1-212ENST00000511270 PROM2Q8N271 834 aa11.62□□□□□ -0.55
PROM1-212ENST00000511270 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
PROM1-212ENST00000511270 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
PROM1-212ENST00000511270 RBM42Q9BTD8 480 aaKnown RBP11.51□□□□□ -0.57
PROM1-212ENST00000511270 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
PROM1-212ENST00000511270 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
PROM1-212ENST00000511270 PABPN1Q86U42 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
PROM1-212ENST00000511270 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
PROM1-212ENST00000511270 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
PROM1-212ENST00000511270 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
PROM1-212ENST00000511270 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
PROM1-212ENST00000511270 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
PROM1-212ENST00000511270 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
PROM1-212ENST00000511270 IFNLR1Q8IU57 520 aaPredicted RBP11.07□□□□□ -0.64
PROM1-212ENST00000511270 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
PROM1-212ENST00000511270 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
PROM1-212ENST00000511270 PLCD3Q8N3E9 789 aa11.04□□□□□ -0.64
PROM1-212ENST00000511270 PLEKHG5O94827 1062 aa11.03□□□□□ -0.64
PROM1-212ENST00000511270 MIER1Q8N108 512 aa11.03□□□□□ -0.64
PROM1-212ENST00000511270 ZBTB47Q9UFB7 747 aaPredicted RBP11.01□□□□□ -0.65
PROM1-212ENST00000511270 CCDC180Q9P1Z9 1646 aa10.98□□□□□ -0.65
PROM1-212ENST00000511270 RTN4Q9NQC3 1192 aaKnown RBP10.96□□□□□ -0.65
PROM1-212ENST00000511270 CREBZFQ9NS37 354 aa10.95□□□□□ -0.66
PROM1-212ENST00000511270 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
PROM1-212ENST00000511270 KLHL34Q8N239 644 aa10.93□□□□□ -0.66
PROM1-212ENST00000511270 SPOCK2Q92563 424 aa10.93□□□□□ -0.66
PROM1-212ENST00000511270 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.66
PROM1-212ENST00000511270 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
PROM1-212ENST00000511270 PIP4P2Q8N4L2 257 aa10.81□□□□□ -0.68
PROM1-212ENST00000511270 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
PROM1-212ENST00000511270 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
PROM1-212ENST00000511270 NUBP1P53384 320 aa10.79□□□□□ -0.68
PROM1-212ENST00000511270 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
PROM1-212ENST00000511270 FARP1Q9Y4F1 1045 aaPredicted RBP10.77□□□□□ -0.69
PROM1-212ENST00000511270 PKD2Q13563 968 aa10.76□□□□□ -0.69
PROM1-212ENST00000511270 GSE1Q14687 1217 aa10.73□□□□□ -0.69
PROM1-212ENST00000511270 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
PROM1-212ENST00000511270 FAM212AQ96EL1 285 aa10.71□□□□□ -0.69
PROM1-212ENST00000511270 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
PROM1-212ENST00000511270 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
PROM1-212ENST00000511270 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
PROM1-212ENST00000511270 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms