RNA–Protein interactions for RNA: ENST00000511201.2

APBB3-216, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 5 BASIC

Gene APBB3, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-216ENST00000511201 ALKQ9UM73 1620 aa27.98■■■□□ 2.07
APBB3-216ENST00000511201 UBAP1LF5GYI3 381 aa27.96■■■□□ 2.07
APBB3-216ENST00000511201 XIRP1Q702N8 1843 aaKnown RBP27.95■■■□□ 2.06
APBB3-216ENST00000511201 DIP2AQ14689 1571 aa27.94■■■□□ 2.06
APBB3-216ENST00000511201 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.93■■■□□ 2.06
APBB3-216ENST00000511201 NKTRP30414 1462 aaKnown RBP27.93■■■□□ 2.06
APBB3-216ENST00000511201 CHGAP10645 457 aaKnown RBP27.92■■■□□ 2.06
APBB3-216ENST00000511201 HDGFP51858 240 aaKnown RBP27.92■■■□□ 2.06
APBB3-216ENST00000511201 TRIM52Q96A61 297 aa27.91■■■□□ 2.06
APBB3-216ENST00000511201 SLC26A8Q96RN1 970 aa27.91■■■□□ 2.06
APBB3-216ENST00000511201 ADAMTS13Q76LX8 1427 aa27.91■■■□□ 2.06
APBB3-216ENST00000511201 PPP1R15AO75807 674 aaPredicted RBP27.9■■■□□ 2.06
APBB3-216ENST00000511201 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
APBB3-216ENST00000511201 KIF1BO60333 1816 aa27.88■■■□□ 2.05
APBB3-216ENST00000511201 KCNA6P17658 529 aa27.88■■■□□ 2.05
APBB3-216ENST00000511201 SLC4A1APQ9BWU0 796 aaKnown RBP27.88■■■□□ 2.05
APBB3-216ENST00000511201 SETBP1Q9Y6X0 1596 aa27.87■■■□□ 2.05
APBB3-216ENST00000511201 NRXN3Q9Y4C0 1643 aa27.87■■■□□ 2.05
APBB3-216ENST00000511201 CHD2O14647 1828 aaKnown RBP27.87■■■□□ 2.05
APBB3-216ENST00000511201 TOM1O60784 492 aa27.85■■■□□ 2.05
APBB3-216ENST00000511201 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
APBB3-216ENST00000511201 TBX22Q9Y458 520 aa27.83■■■□□ 2.05
APBB3-216ENST00000511201 PIK3R4Q99570 1358 aa27.82■■■□□ 2.04
APBB3-216ENST00000511201 ACIN1Q9UKV3 1341 aaKnown RBP27.81■■■□□ 2.04
APBB3-216ENST00000511201 TMEM94Q12767 1356 aa27.81■■■□□ 2.04
APBB3-216ENST00000511201 BCANQ96GW7 911 aa27.8■■■□□ 2.04
APBB3-216ENST00000511201 NUTM2DQ5VT03 806 aaPredicted RBP27.79■■■□□ 2.04
APBB3-216ENST00000511201 RAB3GAP2Q9H2M9 1393 aa27.75■■■□□ 2.03
APBB3-216ENST00000511201 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
APBB3-216ENST00000511201 MPHOSPH9Q99550 1183 aa27.75■■■□□ 2.03
APBB3-216ENST00000511201 SENP3Q9H4L4 574 aaPredicted RBP27.74■■■□□ 2.03
APBB3-216ENST00000511201 XRN1Q8IZH2 1706 aaKnown RBP27.74■■■□□ 2.03
APBB3-216ENST00000511201 PIP4K2BP78356 416 aa27.73■■■□□ 2.03
APBB3-216ENST00000511201 PPLO60437 1756 aa27.73■■■□□ 2.03
APBB3-216ENST00000511201 FOXD1Q16676 465 aa27.72■■■□□ 2.03
APBB3-216ENST00000511201 CCDC144AA2RUR9 1427 aa27.72■■■□□ 2.03
APBB3-216ENST00000511201 PTPRUQ92729 1446 aa27.71■■■□□ 2.03
APBB3-216ENST00000511201 NCOA3Q9Y6Q9 1424 aa27.7■■■□□ 2.03
APBB3-216ENST00000511201 PROSER2Q86WR7 435 aaPredicted RBP27.7■■■□□ 2.02
APBB3-216ENST00000511201 SETD1AO15047 1707 aaKnown RBP27.7■■■□□ 2.02
APBB3-216ENST00000511201 SCAF1Q9H7N4 1312 aaKnown RBP27.69■■■□□ 2.02
APBB3-216ENST00000511201 SPATA31E1Q6ZUB1 1445 aa27.69■■■□□ 2.02
APBB3-216ENST00000511201 RPGRIP1LQ68CZ1 1315 aa27.67■■■□□ 2.02
APBB3-216ENST00000511201 HSPA1LP34931 641 aa27.66■■■□□ 2.02
APBB3-216ENST00000511201 IFT172Q9UG01 1749 aa27.66■■■□□ 2.02
APBB3-216ENST00000511201 MSH6P52701 1360 aa27.64■■■□□ 2.02
APBB3-216ENST00000511201 METP08581 1390 aa27.63■■■□□ 2.01
APBB3-216ENST00000511201 RBM33Q96EV2 1170 aaKnown RBP27.63■■■□□ 2.01
APBB3-216ENST00000511201 FAM135BQ49AJ0 1406 aa27.62■■■□□ 2.01
APBB3-216ENST00000511201 PRAG1Q86YV5 1406 aa27.6■■■□□ 2.01
APBB3-216ENST00000511201 VGFO15240 615 aaPredicted RBP27.6■■■□□ 2.01
APBB3-216ENST00000511201 AMOTL2Q9Y2J4 779 aa27.59■■■□□ 2.01
APBB3-216ENST00000511201 ROBO1Q9Y6N7 1651 aa27.59■■■□□ 2.01
APBB3-216ENST00000511201 HRCP23327 699 aa27.58■■■□□ 2.01
APBB3-216ENST00000511201 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.57■■■□□ 2
APBB3-216ENST00000511201 DCCP43146 1447 aa27.54■■■□□ 2
APBB3-216ENST00000511201 PTCH1Q13635 1447 aa27.54■■■□□ 2
APBB3-216ENST00000511201 ANKRD30BQ9BXX2 1392 aa27.54■■■□□ 2
APBB3-216ENST00000511201 MED1Q15648 1581 aaPredicted RBP27.51■■□□□ 1.99
APBB3-216ENST00000511201 PIK3C2GO75747 1445 aa27.5■■□□□ 1.99
APBB3-216ENST00000511201 DISP3Q9P2K9 1392 aa27.49■■□□□ 1.99
APBB3-216ENST00000511201 C19orf44Q9H6X5 657 aa27.49■■□□□ 1.99
APBB3-216ENST00000511201 NALCNQ8IZF0 1738 aa27.49■■□□□ 1.99
APBB3-216ENST00000511201 MYOM2P54296 1465 aa27.49■■□□□ 1.99
APBB3-216ENST00000511201 NRXN1Q9ULB1 1477 aa27.48■■□□□ 1.99
APBB3-216ENST00000511201 ADGRL3Q9HAR2 1447 aa27.48■■□□□ 1.99
APBB3-216ENST00000511201 ADGRF5Q8IZF2 1346 aa27.47■■□□□ 1.99
APBB3-216ENST00000511201 SLAIN2Q9P270 581 aa27.47■■□□□ 1.99
APBB3-216ENST00000511201 ASXL1Q8IXJ9 1541 aa27.46■■□□□ 1.99
APBB3-216ENST00000511201 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
APBB3-216ENST00000511201 C14orf37Q86TY3 774 aa27.45■■□□□ 1.98
APBB3-216ENST00000511201 CADPS2Q86UW7 1296 aa27.45■■□□□ 1.98
APBB3-216ENST00000511201 ROBO2Q9HCK4 1378 aa27.43■■□□□ 1.98
APBB3-216ENST00000511201 TECPR2O15040 1411 aa27.41■■□□□ 1.98
APBB3-216ENST00000511201 LAMC1P11047 1609 aa27.41■■□□□ 1.98
APBB3-216ENST00000511201 KNDC1Q76NI1 1749 aa27.41■■□□□ 1.98
APBB3-216ENST00000511201 AHDC1Q5TGY3 1603 aaPredicted RBP27.41■■□□□ 1.98
APBB3-216ENST00000511201 ATF3P18847 181 aa27.4■■□□□ 1.98
APBB3-216ENST00000511201 MST1RQ04912 1400 aa27.4■■□□□ 1.98
APBB3-216ENST00000511201 PHLPP1O60346 1717 aa27.39■■□□□ 1.98
APBB3-216ENST00000511201 COL16A1Q07092 1604 aaPredicted RBP27.39■■□□□ 1.98
APBB3-216ENST00000511201 LRPPRCP42704 1394 aaKnown RBP27.35■■□□□ 1.97
APBB3-216ENST00000511201 CDC42BPGQ6DT37 1551 aa27.33■■□□□ 1.97
APBB3-216ENST00000511201 ABCC11Q96J66 1382 aa27.31■■□□□ 1.96
APBB3-216ENST00000511201 NHSL1Q5SYE7 1610 aa27.3■■□□□ 1.96
APBB3-216ENST00000511201 BRINP3Q76B58 766 aa27.3■■□□□ 1.96
APBB3-216ENST00000511201 YTHDC2Q9H6S0 1430 aaKnown RBP27.29■■□□□ 1.96
APBB3-216ENST00000511201 C14orf93Q9H972 538 aaKnown RBP27.28■■□□□ 1.96
APBB3-216ENST00000511201 C1orf167Q5SNV9 1468 aa27.26■■□□□ 1.95
APBB3-216ENST00000511201 ILDR2Q71H61 639 aa27.26■■□□□ 1.95
APBB3-216ENST00000511201 ADGRB1O14514 1584 aa27.26■■□□□ 1.95
APBB3-216ENST00000511201 JCADQ9P266 1359 aa27.25■■□□□ 1.95
APBB3-216ENST00000511201 SHPRHQ149N8 1683 aa27.24■■□□□ 1.95
APBB3-216ENST00000511201 DHX57Q6P158 1386 aaKnown RBP27.23■■□□□ 1.95
APBB3-216ENST00000511201 TMEM132EQ6IEE7 984 aa27.23■■□□□ 1.95
APBB3-216ENST00000511201 DLC1Q96QB1 1528 aa27.21■■□□□ 1.95
APBB3-216ENST00000511201 CFAP70Q5T0N1 1121 aa27.21■■□□□ 1.95
APBB3-216ENST00000511201 STAC3Q96MF2 364 aa27.2■■□□□ 1.94
APBB3-216ENST00000511201 PLEKHH1Q9ULM0 1364 aa27.2■■□□□ 1.94
APBB3-216ENST00000511201 SIRT1Q96EB6 747 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms