RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RAB3GAP2Q9H2M9 1393 aa23.21■■□□□ 1.31
SH3TC1-220ENST00000511002 SLC26A8Q96RN1 970 aa23.19■■□□□ 1.3
SH3TC1-220ENST00000511002 CLTCL1P53675 1640 aa23.19■■□□□ 1.3
SH3TC1-220ENST00000511002 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
SH3TC1-220ENST00000511002 NUTM2DQ5VT03 806 aaPredicted RBP23.18■■□□□ 1.3
SH3TC1-220ENST00000511002 UBAP1LF5GYI3 381 aa23.17■■□□□ 1.3
SH3TC1-220ENST00000511002 TRPM2O94759 1503 aa23.16■■□□□ 1.3
SH3TC1-220ENST00000511002 PLEKHG1Q9ULL1 1385 aa23.14■■□□□ 1.3
SH3TC1-220ENST00000511002 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
SH3TC1-220ENST00000511002 ALKQ9UM73 1620 aa23.14■■□□□ 1.29
SH3TC1-220ENST00000511002 XIRP1Q702N8 1843 aaKnown RBP23.13■■□□□ 1.29
SH3TC1-220ENST00000511002 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
SH3TC1-220ENST00000511002 FOXD1Q16676 465 aa23.12■■□□□ 1.29
SH3TC1-220ENST00000511002 BCANQ96GW7 911 aa23.11■■□□□ 1.29
SH3TC1-220ENST00000511002 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.29
SH3TC1-220ENST00000511002 NWD1Q149M9 1564 aa23.07■■□□□ 1.28
SH3TC1-220ENST00000511002 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.07■■□□□ 1.28
SH3TC1-220ENST00000511002 KIF1BO60333 1816 aa23.06■■□□□ 1.28
SH3TC1-220ENST00000511002 KCNA6P17658 529 aa23.06■■□□□ 1.28
SH3TC1-220ENST00000511002 NEXMIFQ5QGS0 1516 aa23.05■■□□□ 1.28
SH3TC1-220ENST00000511002 HDGFP51858 240 aaKnown RBP23.05■■□□□ 1.28
SH3TC1-220ENST00000511002 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
SH3TC1-220ENST00000511002 CHD2O14647 1828 aaKnown RBP23.05■■□□□ 1.28
SH3TC1-220ENST00000511002 NRXN3Q9Y4C0 1643 aa23.04■■□□□ 1.28
SH3TC1-220ENST00000511002 PIP4K2BP78356 416 aa23.04■■□□□ 1.28
SH3TC1-220ENST00000511002 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
SH3TC1-220ENST00000511002 MPHOSPH9Q99550 1183 aa23.04■■□□□ 1.28
SH3TC1-220ENST00000511002 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
SH3TC1-220ENST00000511002 TMEM94Q12767 1356 aa23.02■■□□□ 1.28
SH3TC1-220ENST00000511002 TOM1O60784 492 aa23.02■■□□□ 1.28
SH3TC1-220ENST00000511002 HRCP23327 699 aa23.02■■□□□ 1.28
SH3TC1-220ENST00000511002 SCAF1Q9H7N4 1312 aaKnown RBP23.02■■□□□ 1.28
SH3TC1-220ENST00000511002 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
SH3TC1-220ENST00000511002 DIP2AQ14689 1571 aa23■■□□□ 1.27
SH3TC1-220ENST00000511002 ACIN1Q9UKV3 1341 aaKnown RBP23■■□□□ 1.27
SH3TC1-220ENST00000511002 NKTRP30414 1462 aaKnown RBP22.99■■□□□ 1.27
SH3TC1-220ENST00000511002 SETBP1Q9Y6X0 1596 aa22.98■■□□□ 1.27
SH3TC1-220ENST00000511002 PROSER2Q86WR7 435 aaPredicted RBP22.98■■□□□ 1.27
SH3TC1-220ENST00000511002 PTPRUQ92729 1446 aa22.98■■□□□ 1.27
SH3TC1-220ENST00000511002 HSPA1LP34931 641 aa22.94■■□□□ 1.26
SH3TC1-220ENST00000511002 PPLO60437 1756 aa22.93■■□□□ 1.26
SH3TC1-220ENST00000511002 CCDC144AA2RUR9 1427 aa22.92■■□□□ 1.26
SH3TC1-220ENST00000511002 METP08581 1390 aa22.91■■□□□ 1.26
SH3TC1-220ENST00000511002 PIK3R4Q99570 1358 aa22.9■■□□□ 1.26
SH3TC1-220ENST00000511002 XRN1Q8IZH2 1706 aaKnown RBP22.9■■□□□ 1.26
SH3TC1-220ENST00000511002 SPATA31E1Q6ZUB1 1445 aa22.9■■□□□ 1.26
SH3TC1-220ENST00000511002 SETD1AO15047 1707 aaKnown RBP22.88■■□□□ 1.25
SH3TC1-220ENST00000511002 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
SH3TC1-220ENST00000511002 RGL3Q3MIN7 710 aa22.86■■□□□ 1.25
SH3TC1-220ENST00000511002 IFT172Q9UG01 1749 aa22.85■■□□□ 1.25
SH3TC1-220ENST00000511002 RPGRIP1LQ68CZ1 1315 aa22.85■■□□□ 1.25
SH3TC1-220ENST00000511002 MSH6P52701 1360 aa22.84■■□□□ 1.25
SH3TC1-220ENST00000511002 VGFO15240 615 aaPredicted RBP22.83■■□□□ 1.25
SH3TC1-220ENST00000511002 DHX57Q6P158 1386 aaKnown RBP22.83■■□□□ 1.25
SH3TC1-220ENST00000511002 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
SH3TC1-220ENST00000511002 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.81■■□□□ 1.24
SH3TC1-220ENST00000511002 ROBO1Q9Y6N7 1651 aa22.81■■□□□ 1.24
SH3TC1-220ENST00000511002 ANKRD30BQ9BXX2 1392 aa22.79■■□□□ 1.24
SH3TC1-220ENST00000511002 FAM135BQ49AJ0 1406 aa22.79■■□□□ 1.24
SH3TC1-220ENST00000511002 NCOA3Q9Y6Q9 1424 aa22.79■■□□□ 1.24
SH3TC1-220ENST00000511002 C14orf37Q86TY3 774 aa22.78■■□□□ 1.24
SH3TC1-220ENST00000511002 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
SH3TC1-220ENST00000511002 ASXL1Q8IXJ9 1541 aa22.74■■□□□ 1.23
SH3TC1-220ENST00000511002 SLAIN2Q9P270 581 aa22.74■■□□□ 1.23
SH3TC1-220ENST00000511002 NALCNQ8IZF0 1738 aa22.74■■□□□ 1.23
SH3TC1-220ENST00000511002 C19orf44Q9H6X5 657 aa22.73■■□□□ 1.23
SH3TC1-220ENST00000511002 ROBO2Q9HCK4 1378 aa22.73■■□□□ 1.23
SH3TC1-220ENST00000511002 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
SH3TC1-220ENST00000511002 PIK3C2GO75747 1445 aa22.71■■□□□ 1.23
SH3TC1-220ENST00000511002 PTCH1Q13635 1447 aa22.7■■□□□ 1.22
SH3TC1-220ENST00000511002 PRAG1Q86YV5 1406 aa22.69■■□□□ 1.22
SH3TC1-220ENST00000511002 ADGRL3Q9HAR2 1447 aa22.69■■□□□ 1.22
SH3TC1-220ENST00000511002 NRXN1Q9ULB1 1477 aa22.68■■□□□ 1.22
SH3TC1-220ENST00000511002 ATF3P18847 181 aa22.68■■□□□ 1.22
SH3TC1-220ENST00000511002 CADPS2Q86UW7 1296 aa22.68■■□□□ 1.22
SH3TC1-220ENST00000511002 MYOM2P54296 1465 aa22.66■■□□□ 1.22
SH3TC1-220ENST00000511002 DCCP43146 1447 aa22.66■■□□□ 1.22
SH3TC1-220ENST00000511002 TMEM132EQ6IEE7 984 aa22.66■■□□□ 1.22
SH3TC1-220ENST00000511002 MST1RQ04912 1400 aa22.65■■□□□ 1.22
SH3TC1-220ENST00000511002 PHLPP1O60346 1717 aa22.65■■□□□ 1.22
SH3TC1-220ENST00000511002 ILDR2Q71H61 639 aa22.65■■□□□ 1.22
SH3TC1-220ENST00000511002 STK26Q9P289 416 aa22.63■■□□□ 1.21
SH3TC1-220ENST00000511002 COL16A1Q07092 1604 aaPredicted RBP22.62■■□□□ 1.21
SH3TC1-220ENST00000511002 CFAP70Q5T0N1 1121 aa22.62■■□□□ 1.21
SH3TC1-220ENST00000511002 LRPPRCP42704 1394 aaKnown RBP22.62■■□□□ 1.21
SH3TC1-220ENST00000511002 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
SH3TC1-220ENST00000511002 KNDC1Q76NI1 1749 aa22.61■■□□□ 1.21
SH3TC1-220ENST00000511002 C14orf93Q9H972 538 aaKnown RBP22.61■■□□□ 1.21
SH3TC1-220ENST00000511002 TECPR2O15040 1411 aa22.6■■□□□ 1.21
SH3TC1-220ENST00000511002 WAPLQ7Z5K2 1190 aa22.59■■□□□ 1.21
SH3TC1-220ENST00000511002 SIN3AQ96ST3 1273 aa22.59■■□□□ 1.21
SH3TC1-220ENST00000511002 AHDC1Q5TGY3 1603 aaPredicted RBP22.59■■□□□ 1.21
SH3TC1-220ENST00000511002 PLEKHH1Q9ULM0 1364 aa22.59■■□□□ 1.21
SH3TC1-220ENST00000511002 YTHDC2Q9H6S0 1430 aaKnown RBP22.58■■□□□ 1.21
SH3TC1-220ENST00000511002 KDM2AQ9Y2K7 1162 aa22.58■■□□□ 1.21
SH3TC1-220ENST00000511002 LAMC1P11047 1609 aa22.57■■□□□ 1.2
SH3TC1-220ENST00000511002 ABCC11Q96J66 1382 aa22.57■■□□□ 1.2
SH3TC1-220ENST00000511002 DCAF11Q8TEB1 546 aa22.56■■□□□ 1.2
SH3TC1-220ENST00000511002 C1orf167Q5SNV9 1468 aa22.54■■□□□ 1.2
SH3TC1-220ENST00000511002 DDX17Q92841 729 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms