RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 ZFYVE9O95405 1425 aa18.32■□□□□ 0.52
CHFR-208ENST00000511001 SPHKAPQ2M3C7 1700 aa18.32■□□□□ 0.52
CHFR-208ENST00000511001 HSPA1LP34931 641 aa18.3■□□□□ 0.52
CHFR-208ENST00000511001 PIP4K2BP78356 416 aa18.3■□□□□ 0.52
CHFR-208ENST00000511001 RIMS2Q9UQ26 1411 aa18.29■□□□□ 0.52
CHFR-208ENST00000511001 HFM1A2PYH4 1435 aa18.27■□□□□ 0.52
CHFR-208ENST00000511001 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
CHFR-208ENST00000511001 TOM1O60784 492 aa18.25■□□□□ 0.51
CHFR-208ENST00000511001 SLC26A8Q96RN1 970 aa18.25■□□□□ 0.51
CHFR-208ENST00000511001 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
CHFR-208ENST00000511001 CHD2O14647 1828 aaKnown RBP18.25■□□□□ 0.51
CHFR-208ENST00000511001 CHGAP10645 457 aaKnown RBP18.24■□□□□ 0.51
CHFR-208ENST00000511001 KCNA6P17658 529 aa18.22■□□□□ 0.51
CHFR-208ENST00000511001 CLTCL1P53675 1640 aa18.22■□□□□ 0.51
CHFR-208ENST00000511001 TRPM2O94759 1503 aa18.2■□□□□ 0.5
CHFR-208ENST00000511001 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
CHFR-208ENST00000511001 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
CHFR-208ENST00000511001 KIF1BO60333 1816 aa18.19■□□□□ 0.5
CHFR-208ENST00000511001 HDGFP51858 240 aaKnown RBP18.19■□□□□ 0.5
CHFR-208ENST00000511001 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
CHFR-208ENST00000511001 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHFR-208ENST00000511001 NKTRP30414 1462 aaKnown RBP18.19■□□□□ 0.5
CHFR-208ENST00000511001 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
CHFR-208ENST00000511001 BCANQ96GW7 911 aa18.17■□□□□ 0.5
CHFR-208ENST00000511001 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
CHFR-208ENST00000511001 DIP2AQ14689 1571 aa18.17■□□□□ 0.5
CHFR-208ENST00000511001 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
CHFR-208ENST00000511001 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
CHFR-208ENST00000511001 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
CHFR-208ENST00000511001 TBX22Q9Y458 520 aa18.16■□□□□ 0.5
CHFR-208ENST00000511001 PROSER2Q86WR7 435 aaPredicted RBP18.14■□□□□ 0.49
CHFR-208ENST00000511001 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
CHFR-208ENST00000511001 NEXMIFQ5QGS0 1516 aa18.13■□□□□ 0.49
CHFR-208ENST00000511001 SETBP1Q9Y6X0 1596 aa18.13■□□□□ 0.49
CHFR-208ENST00000511001 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
CHFR-208ENST00000511001 PIK3R4Q99570 1358 aa18.1■□□□□ 0.49
CHFR-208ENST00000511001 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
CHFR-208ENST00000511001 ZNF326Q5BKZ1 582 aaKnown RBP18.08■□□□□ 0.48
CHFR-208ENST00000511001 XRN1Q8IZH2 1706 aaKnown RBP18.08■□□□□ 0.48
CHFR-208ENST00000511001 PPLO60437 1756 aa18.07■□□□□ 0.48
CHFR-208ENST00000511001 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
CHFR-208ENST00000511001 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
CHFR-208ENST00000511001 FOXD1Q16676 465 aa18.05■□□□□ 0.48
CHFR-208ENST00000511001 SETD1AO15047 1707 aaKnown RBP18.05■□□□□ 0.48
CHFR-208ENST00000511001 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
CHFR-208ENST00000511001 MSH6P52701 1360 aa18.04■□□□□ 0.48
CHFR-208ENST00000511001 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.04■□□□□ 0.48
CHFR-208ENST00000511001 AMOTL2Q9Y2J4 779 aa18.03■□□□□ 0.48
CHFR-208ENST00000511001 SETD5Q9C0A6 1442 aa18.03■□□□□ 0.48
CHFR-208ENST00000511001 METP08581 1390 aa18.03■□□□□ 0.48
CHFR-208ENST00000511001 MPHOSPH9Q99550 1183 aa18.02■□□□□ 0.48
CHFR-208ENST00000511001 IFT172Q9UG01 1749 aa18■□□□□ 0.47
CHFR-208ENST00000511001 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
CHFR-208ENST00000511001 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
CHFR-208ENST00000511001 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
CHFR-208ENST00000511001 SLAIN2Q9P270 581 aa17.97■□□□□ 0.47
CHFR-208ENST00000511001 CCDC144AA2RUR9 1427 aa17.97■□□□□ 0.47
CHFR-208ENST00000511001 VGFO15240 615 aaPredicted RBP17.96■□□□□ 0.47
CHFR-208ENST00000511001 RGS17Q9UGC6 210 aaPredicted RBP17.96■□□□□ 0.47
CHFR-208ENST00000511001 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
CHFR-208ENST00000511001 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
CHFR-208ENST00000511001 ACIN1Q9UKV3 1341 aaKnown RBP17.95■□□□□ 0.46
CHFR-208ENST00000511001 C14orf37Q86TY3 774 aa17.94■□□□□ 0.46
CHFR-208ENST00000511001 NALCNQ8IZF0 1738 aa17.94■□□□□ 0.46
CHFR-208ENST00000511001 DCCP43146 1447 aa17.92■□□□□ 0.46
CHFR-208ENST00000511001 CADPS2Q86UW7 1296 aa17.92■□□□□ 0.46
CHFR-208ENST00000511001 COL16A1Q07092 1604 aaPredicted RBP17.91■□□□□ 0.46
CHFR-208ENST00000511001 ADGRF5Q8IZF2 1346 aa17.91■□□□□ 0.46
CHFR-208ENST00000511001 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
CHFR-208ENST00000511001 ATF3P18847 181 aa17.9■□□□□ 0.46
CHFR-208ENST00000511001 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
CHFR-208ENST00000511001 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
CHFR-208ENST00000511001 PTCH1Q13635 1447 aa17.89■□□□□ 0.46
CHFR-208ENST00000511001 ADGRL3Q9HAR2 1447 aa17.89■□□□□ 0.46
CHFR-208ENST00000511001 ROBO2Q9HCK4 1378 aa17.88■□□□□ 0.45
CHFR-208ENST00000511001 MST1RQ04912 1400 aa17.88■□□□□ 0.45
CHFR-208ENST00000511001 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
CHFR-208ENST00000511001 ASXL1Q8IXJ9 1541 aa17.86■□□□□ 0.45
CHFR-208ENST00000511001 NHSL1Q5SYE7 1610 aa17.85■□□□□ 0.45
CHFR-208ENST00000511001 POTEAQ6S8J7 498 aa17.85■□□□□ 0.45
CHFR-208ENST00000511001 BRINP3Q76B58 766 aa17.85■□□□□ 0.45
CHFR-208ENST00000511001 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
CHFR-208ENST00000511001 KNDC1Q76NI1 1749 aa17.84■□□□□ 0.45
CHFR-208ENST00000511001 HRCP23327 699 aa17.83■□□□□ 0.44
CHFR-208ENST00000511001 JCADQ9P266 1359 aa17.82■□□□□ 0.44
CHFR-208ENST00000511001 SHPRHQ149N8 1683 aa17.82■□□□□ 0.44
CHFR-208ENST00000511001 NRXN1Q9ULB1 1477 aa17.82■□□□□ 0.44
CHFR-208ENST00000511001 MYOM2P54296 1465 aa17.81■□□□□ 0.44
CHFR-208ENST00000511001 TECPR2O15040 1411 aa17.81■□□□□ 0.44
CHFR-208ENST00000511001 C1orf167Q5SNV9 1468 aa17.79■□□□□ 0.44
CHFR-208ENST00000511001 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
CHFR-208ENST00000511001 LAMC1P11047 1609 aa17.77■□□□□ 0.44
CHFR-208ENST00000511001 TMEM132EQ6IEE7 984 aa17.77■□□□□ 0.44
CHFR-208ENST00000511001 ABCC11Q96J66 1382 aa17.77■□□□□ 0.43
CHFR-208ENST00000511001 LRP6O75581 1613 aa17.76■□□□□ 0.43
CHFR-208ENST00000511001 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
CHFR-208ENST00000511001 C14orf93Q9H972 538 aaKnown RBP17.76■□□□□ 0.43
CHFR-208ENST00000511001 YTHDC2Q9H6S0 1430 aaKnown RBP17.75■□□□□ 0.43
CHFR-208ENST00000511001 STK26Q9P289 416 aa17.75■□□□□ 0.43
CHFR-208ENST00000511001 DDX17Q92841 729 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms