RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
HMGXB3-203ENST00000510472 SOCS7O14512 581 aa17.48■□□□□ 0.39
HMGXB3-203ENST00000510472 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
HMGXB3-203ENST00000510472 PLEKHG1Q9ULL1 1385 aa17.47■□□□□ 0.39
HMGXB3-203ENST00000510472 IQGAP1P46940 1657 aa17.46■□□□□ 0.39
HMGXB3-203ENST00000510472 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
HMGXB3-203ENST00000510472 IQSEC2Q5JU85 1478 aa17.44■□□□□ 0.38
HMGXB3-203ENST00000510472 SPHKAPQ2M3C7 1700 aa17.44■□□□□ 0.38
HMGXB3-203ENST00000510472 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
HMGXB3-203ENST00000510472 NUTM2DQ5VT03 806 aaPredicted RBP17.43■□□□□ 0.38
HMGXB3-203ENST00000510472 CLTCL1P53675 1640 aa17.43■□□□□ 0.38
HMGXB3-203ENST00000510472 PPP1R15AO75807 674 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-203ENST00000510472 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
HMGXB3-203ENST00000510472 CPS1P31327 1500 aa17.42■□□□□ 0.38
HMGXB3-203ENST00000510472 KCNA6P17658 529 aa17.41■□□□□ 0.38
HMGXB3-203ENST00000510472 ADAMTS13Q76LX8 1427 aa17.4■□□□□ 0.38
HMGXB3-203ENST00000510472 ZNF326Q5BKZ1 582 aaKnown RBP17.4■□□□□ 0.38
HMGXB3-203ENST00000510472 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
HMGXB3-203ENST00000510472 MYO5BQ9ULV0 1848 aa17.39■□□□□ 0.37
HMGXB3-203ENST00000510472 BCANQ96GW7 911 aa17.38■□□□□ 0.37
HMGXB3-203ENST00000510472 ANKRD30BQ9BXX2 1392 aa17.38■□□□□ 0.37
HMGXB3-203ENST00000510472 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
HMGXB3-203ENST00000510472 SPATA31E1Q6ZUB1 1445 aa17.38■□□□□ 0.37
HMGXB3-203ENST00000510472 LRRC7Q96NW7 1537 aa17.37■□□□□ 0.37
HMGXB3-203ENST00000510472 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
HMGXB3-203ENST00000510472 VGFO15240 615 aaPredicted RBP17.35■□□□□ 0.37
HMGXB3-203ENST00000510472 NEXMIFQ5QGS0 1516 aa17.35■□□□□ 0.37
HMGXB3-203ENST00000510472 STRCP1A6NGW2 1772 aa17.35■□□□□ 0.37
HMGXB3-203ENST00000510472 PIK3R4Q99570 1358 aa17.34■□□□□ 0.37
HMGXB3-203ENST00000510472 UBAP1LF5GYI3 381 aa17.31■□□□□ 0.36
HMGXB3-203ENST00000510472 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
HMGXB3-203ENST00000510472 SETBP1Q9Y6X0 1596 aa17.31■□□□□ 0.36
HMGXB3-203ENST00000510472 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-203ENST00000510472 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-203ENST00000510472 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
HMGXB3-203ENST00000510472 METP08581 1390 aa17.29■□□□□ 0.36
HMGXB3-203ENST00000510472 TMEM94Q12767 1356 aa17.29■□□□□ 0.36
HMGXB3-203ENST00000510472 DIP2AQ14689 1571 aa17.28■□□□□ 0.36
HMGXB3-203ENST00000510472 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
HMGXB3-203ENST00000510472 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
HMGXB3-203ENST00000510472 TOM1O60784 492 aa17.28■□□□□ 0.36
HMGXB3-203ENST00000510472 AMOTL2Q9Y2J4 779 aa17.28■□□□□ 0.36
HMGXB3-203ENST00000510472 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-203ENST00000510472 NRXN3Q9Y4C0 1643 aa17.28■□□□□ 0.36
HMGXB3-203ENST00000510472 KIF1BO60333 1816 aa17.28■□□□□ 0.36
HMGXB3-203ENST00000510472 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-203ENST00000510472 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
HMGXB3-203ENST00000510472 NCOA3Q9Y6Q9 1424 aa17.24■□□□□ 0.35
HMGXB3-203ENST00000510472 CHD2O14647 1828 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-203ENST00000510472 NRXN1Q9ULB1 1477 aa17.2■□□□□ 0.34
HMGXB3-203ENST00000510472 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-203ENST00000510472 PIK3C2GO75747 1445 aa17.2■□□□□ 0.34
HMGXB3-203ENST00000510472 PPLO60437 1756 aa17.2■□□□□ 0.34
HMGXB3-203ENST00000510472 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-203ENST00000510472 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
HMGXB3-203ENST00000510472 STAC3Q96MF2 364 aa17.19■□□□□ 0.34
HMGXB3-203ENST00000510472 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
HMGXB3-203ENST00000510472 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
HMGXB3-203ENST00000510472 XIRP1Q702N8 1843 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-203ENST00000510472 MYOM2P54296 1465 aa17.17■□□□□ 0.34
HMGXB3-203ENST00000510472 MSH6P52701 1360 aa17.16■□□□□ 0.34
HMGXB3-203ENST00000510472 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-203ENST00000510472 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
HMGXB3-203ENST00000510472 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
HMGXB3-203ENST00000510472 FAM135BQ49AJ0 1406 aa17.14■□□□□ 0.33
HMGXB3-203ENST00000510472 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-203ENST00000510472 IFT172Q9UG01 1749 aa17.14■□□□□ 0.33
HMGXB3-203ENST00000510472 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
HMGXB3-203ENST00000510472 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
HMGXB3-203ENST00000510472 SLAIN2Q9P270 581 aa17.14■□□□□ 0.33
HMGXB3-203ENST00000510472 ABCC11Q96J66 1382 aa17.14■□□□□ 0.33
HMGXB3-203ENST00000510472 HSPA1LP34931 641 aa17.13■□□□□ 0.33
HMGXB3-203ENST00000510472 LRPPRCP42704 1394 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-203ENST00000510472 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
HMGXB3-203ENST00000510472 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
HMGXB3-203ENST00000510472 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
HMGXB3-203ENST00000510472 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-203ENST00000510472 TECPR2O15040 1411 aa17.12■□□□□ 0.33
HMGXB3-203ENST00000510472 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
HMGXB3-203ENST00000510472 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
HMGXB3-203ENST00000510472 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
HMGXB3-203ENST00000510472 ASXL1Q8IXJ9 1541 aa17.1■□□□□ 0.33
HMGXB3-203ENST00000510472 ATF3P18847 181 aa17.09■□□□□ 0.33
HMGXB3-203ENST00000510472 DCCP43146 1447 aa17.09■□□□□ 0.33
HMGXB3-203ENST00000510472 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
HMGXB3-203ENST00000510472 STK26Q9P289 416 aa17.08■□□□□ 0.32
HMGXB3-203ENST00000510472 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-203ENST00000510472 WAPLQ7Z5K2 1190 aa17.06■□□□□ 0.32
HMGXB3-203ENST00000510472 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
HMGXB3-203ENST00000510472 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
HMGXB3-203ENST00000510472 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-203ENST00000510472 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
HMGXB3-203ENST00000510472 MST1RQ04912 1400 aa17.03■□□□□ 0.32
HMGXB3-203ENST00000510472 NEUROD1Q13562 356 aa17.02■□□□□ 0.32
HMGXB3-203ENST00000510472 BRINP3Q76B58 766 aa17.02■□□□□ 0.32
HMGXB3-203ENST00000510472 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
HMGXB3-203ENST00000510472 PRAM1Q96QH2 718 aa16.99■□□□□ 0.31
HMGXB3-203ENST00000510472 LAMC1P11047 1609 aa16.99■□□□□ 0.31
HMGXB3-203ENST00000510472 NBPF1Q3BBV0 1214 aa16.98■□□□□ 0.31
HMGXB3-203ENST00000510472 C1orf167Q5SNV9 1468 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms