RNA–Protein interactions for RNA: ENST00000510390.1

CXCL3-203, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 2

Gene CXCL3, Length 784 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-203ENST00000510390 NWD1Q149M9 1564 aa29.58■■■□□ 2.33
CXCL3-203ENST00000510390 PLEKHG1Q9ULL1 1385 aa29.58■■■□□ 2.33
CXCL3-203ENST00000510390 HFM1A2PYH4 1435 aa29.57■■■□□ 2.32
CXCL3-203ENST00000510390 SCAF1Q9H7N4 1312 aaKnown RBP29.57■■■□□ 2.32
CXCL3-203ENST00000510390 SLC26A8Q96RN1 970 aa29.57■■■□□ 2.32
CXCL3-203ENST00000510390 HDGFP51858 240 aaKnown RBP29.54■■■□□ 2.32
CXCL3-203ENST00000510390 CHGAP10645 457 aaKnown RBP29.53■■■□□ 2.32
CXCL3-203ENST00000510390 KCNA6P17658 529 aa29.53■■■□□ 2.32
CXCL3-203ENST00000510390 NKTRP30414 1462 aaKnown RBP29.52■■■□□ 2.32
CXCL3-203ENST00000510390 CHD2O14647 1828 aaKnown RBP29.52■■■□□ 2.32
CXCL3-203ENST00000510390 PPP1R15AO75807 674 aaPredicted RBP29.51■■■□□ 2.31
CXCL3-203ENST00000510390 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.51■■■□□ 2.31
CXCL3-203ENST00000510390 DISP3Q9P2K9 1392 aa29.51■■■□□ 2.31
CXCL3-203ENST00000510390 HSPA1LP34931 641 aa29.49■■■□□ 2.31
CXCL3-203ENST00000510390 DIP2AQ14689 1571 aa29.48■■■□□ 2.31
CXCL3-203ENST00000510390 BCANQ96GW7 911 aa29.48■■■□□ 2.31
CXCL3-203ENST00000510390 TRPM2O94759 1503 aa29.48■■■□□ 2.31
CXCL3-203ENST00000510390 CLTCL1P53675 1640 aa29.47■■■□□ 2.31
CXCL3-203ENST00000510390 TMEM94Q12767 1356 aa29.46■■■□□ 2.31
CXCL3-203ENST00000510390 ADAMTS13Q76LX8 1427 aa29.44■■■□□ 2.3
CXCL3-203ENST00000510390 SENP3Q9H4L4 574 aaPredicted RBP29.43■■■□□ 2.3
CXCL3-203ENST00000510390 TBX22Q9Y458 520 aa29.42■■■□□ 2.3
CXCL3-203ENST00000510390 NUTM2DQ5VT03 806 aaPredicted RBP29.41■■■□□ 2.3
CXCL3-203ENST00000510390 KIF1BO60333 1816 aa29.41■■■□□ 2.3
CXCL3-203ENST00000510390 PROSER2Q86WR7 435 aaPredicted RBP29.4■■■□□ 2.3
CXCL3-203ENST00000510390 NRXN3Q9Y4C0 1643 aa29.38■■■□□ 2.29
CXCL3-203ENST00000510390 TRIM52Q96A61 297 aa29.37■■■□□ 2.29
CXCL3-203ENST00000510390 PIK3R4Q99570 1358 aa29.37■■■□□ 2.29
CXCL3-203ENST00000510390 SETBP1Q9Y6X0 1596 aa29.36■■■□□ 2.29
CXCL3-203ENST00000510390 NEXMIFQ5QGS0 1516 aa29.35■■■□□ 2.29
CXCL3-203ENST00000510390 RBM33Q96EV2 1170 aaKnown RBP29.34■■■□□ 2.29
CXCL3-203ENST00000510390 MED1Q15648 1581 aaPredicted RBP29.33■■■□□ 2.29
CXCL3-203ENST00000510390 FAM135BQ49AJ0 1406 aa29.32■■■□□ 2.28
CXCL3-203ENST00000510390 ZNF326Q5BKZ1 582 aaKnown RBP29.31■■■□□ 2.28
CXCL3-203ENST00000510390 SLC4A1APQ9BWU0 796 aaKnown RBP29.31■■■□□ 2.28
CXCL3-203ENST00000510390 MSH6P52701 1360 aa29.3■■■□□ 2.28
CXCL3-203ENST00000510390 NCOA3Q9Y6Q9 1424 aa29.29■■■□□ 2.28
CXCL3-203ENST00000510390 ROBO1Q9Y6N7 1651 aa29.29■■■□□ 2.28
CXCL3-203ENST00000510390 ILDR2Q71H61 639 aa29.29■■■□□ 2.28
CXCL3-203ENST00000510390 XRN1Q8IZH2 1706 aaKnown RBP29.27■■■□□ 2.28
CXCL3-203ENST00000510390 PTPRUQ92729 1446 aa29.26■■■□□ 2.27
CXCL3-203ENST00000510390 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.22■■■□□ 2.27
CXCL3-203ENST00000510390 AMOTL2Q9Y2J4 779 aa29.2■■■□□ 2.26
CXCL3-203ENST00000510390 PPLO60437 1756 aa29.2■■■□□ 2.26
CXCL3-203ENST00000510390 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
CXCL3-203ENST00000510390 METP08581 1390 aa29.17■■■□□ 2.26
CXCL3-203ENST00000510390 SLAIN2Q9P270 581 aa29.16■■■□□ 2.26
CXCL3-203ENST00000510390 FOXD1Q16676 465 aa29.15■■■□□ 2.26
CXCL3-203ENST00000510390 RPGRIP1LQ68CZ1 1315 aa29.14■■■□□ 2.25
CXCL3-203ENST00000510390 SETD5Q9C0A6 1442 aa29.13■■■□□ 2.25
CXCL3-203ENST00000510390 C14orf37Q86TY3 774 aa29.13■■■□□ 2.25
CXCL3-203ENST00000510390 MPHOSPH9Q99550 1183 aa29.13■■■□□ 2.25
CXCL3-203ENST00000510390 ACIN1Q9UKV3 1341 aaKnown RBP29.13■■■□□ 2.25
CXCL3-203ENST00000510390 PHLPP1O60346 1717 aa29.12■■■□□ 2.25
CXCL3-203ENST00000510390 VGFO15240 615 aaPredicted RBP29.12■■■□□ 2.25
CXCL3-203ENST00000510390 C19orf44Q9H6X5 657 aa29.12■■■□□ 2.25
CXCL3-203ENST00000510390 CCDC144AA2RUR9 1427 aa29.11■■■□□ 2.25
CXCL3-203ENST00000510390 DCCP43146 1447 aa29.1■■■□□ 2.25
CXCL3-203ENST00000510390 CADPS2Q86UW7 1296 aa29.09■■■□□ 2.25
CXCL3-203ENST00000510390 IFT172Q9UG01 1749 aa29.08■■■□□ 2.25
CXCL3-203ENST00000510390 SOCS7O14512 581 aa29.06■■■□□ 2.24
CXCL3-203ENST00000510390 SPATA31E1Q6ZUB1 1445 aa29.05■■■□□ 2.24
CXCL3-203ENST00000510390 ATF3P18847 181 aa29.05■■■□□ 2.24
CXCL3-203ENST00000510390 NALCNQ8IZF0 1738 aa29.05■■■□□ 2.24
CXCL3-203ENST00000510390 COL16A1Q07092 1604 aaPredicted RBP29.05■■■□□ 2.24
CXCL3-203ENST00000510390 PRAG1Q86YV5 1406 aa29.03■■■□□ 2.24
CXCL3-203ENST00000510390 PTCH1Q13635 1447 aa29.02■■■□□ 2.24
CXCL3-203ENST00000510390 AHDC1Q5TGY3 1603 aaPredicted RBP29.02■■■□□ 2.24
CXCL3-203ENST00000510390 RAB3GAP2Q9H2M9 1393 aa29.01■■■□□ 2.24
CXCL3-203ENST00000510390 PHF23Q9BUL5 403 aaPredicted RBP29.01■■■□□ 2.23
CXCL3-203ENST00000510390 ADGRL3Q9HAR2 1447 aa29.01■■■□□ 2.23
CXCL3-203ENST00000510390 MST1RQ04912 1400 aa28.97■■■□□ 2.23
CXCL3-203ENST00000510390 ANKRD30BQ9BXX2 1392 aa28.96■■■□□ 2.23
CXCL3-203ENST00000510390 JCADQ9P266 1359 aa28.94■■■□□ 2.22
CXCL3-203ENST00000510390 ASXL1Q8IXJ9 1541 aa28.94■■■□□ 2.22
CXCL3-203ENST00000510390 ADGRF5Q8IZF2 1346 aa28.94■■■□□ 2.22
CXCL3-203ENST00000510390 ROBO2Q9HCK4 1378 aa28.93■■■□□ 2.22
CXCL3-203ENST00000510390 RGL3Q3MIN7 710 aa28.93■■■□□ 2.22
CXCL3-203ENST00000510390 BRINP3Q76B58 766 aa28.93■■■□□ 2.22
CXCL3-203ENST00000510390 NHSL1Q5SYE7 1610 aa28.91■■■□□ 2.22
CXCL3-203ENST00000510390 SHPRHQ149N8 1683 aa28.9■■■□□ 2.22
CXCL3-203ENST00000510390 PIK3C2GO75747 1445 aa28.89■■■□□ 2.22
CXCL3-203ENST00000510390 RGS17Q9UGC6 210 aaPredicted RBP28.87■■■□□ 2.21
CXCL3-203ENST00000510390 KNDC1Q76NI1 1749 aa28.86■■■□□ 2.21
CXCL3-203ENST00000510390 TECPR2O15040 1411 aa28.84■■■□□ 2.21
CXCL3-203ENST00000510390 MYOM2P54296 1465 aa28.84■■■□□ 2.21
CXCL3-203ENST00000510390 NRXN1Q9ULB1 1477 aa28.83■■■□□ 2.21
CXCL3-203ENST00000510390 HRCP23327 699 aa28.82■■■□□ 2.2
CXCL3-203ENST00000510390 C1orf167Q5SNV9 1468 aa28.82■■■□□ 2.2
CXCL3-203ENST00000510390 LAMC1P11047 1609 aa28.82■■■□□ 2.2
CXCL3-203ENST00000510390 CDC42BPGQ6DT37 1551 aa28.8■■■□□ 2.2
CXCL3-203ENST00000510390 LRPPRCP42704 1394 aaKnown RBP28.8■■■□□ 2.2
CXCL3-203ENST00000510390 SPATA31A6Q5VVP1 1343 aa28.8■■■□□ 2.2
CXCL3-203ENST00000510390 LRP6O75581 1613 aa28.79■■■□□ 2.2
CXCL3-203ENST00000510390 ABCC11Q96J66 1382 aa28.76■■■□□ 2.2
CXCL3-203ENST00000510390 YTHDC2Q9H6S0 1430 aaKnown RBP28.74■■■□□ 2.19
CXCL3-203ENST00000510390 TMEM132EQ6IEE7 984 aa28.73■■■□□ 2.19
CXCL3-203ENST00000510390 STK26Q9P289 416 aa28.72■■■□□ 2.19
CXCL3-203ENST00000510390 C14orf93Q9H972 538 aaKnown RBP28.71■■■□□ 2.19
CXCL3-203ENST00000510390 POTEAQ6S8J7 498 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms