RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 RIMS2Q9UQ26 1411 aa20.32■□□□□ 0.84
SNF8-206ENST00000509989 KIF1BO60333 1816 aa20.31■□□□□ 0.84
SNF8-206ENST00000509989 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
SNF8-206ENST00000509989 EID1Q9Y6B2 187 aa20.28■□□□□ 0.84
SNF8-206ENST00000509989 FBXO41Q8TF61 875 aa20.27■□□□□ 0.84
SNF8-206ENST00000509989 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.84
SNF8-206ENST00000509989 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
SNF8-206ENST00000509989 NRXN3Q9Y4C0 1643 aa20.23■□□□□ 0.83
SNF8-206ENST00000509989 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
SNF8-206ENST00000509989 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
SNF8-206ENST00000509989 ADAMTS13Q76LX8 1427 aa20.2■□□□□ 0.82
SNF8-206ENST00000509989 CPS1P31327 1500 aa20.2■□□□□ 0.82
SNF8-206ENST00000509989 LRRC7Q96NW7 1537 aa20.2■□□□□ 0.82
SNF8-206ENST00000509989 CHD2O14647 1828 aaKnown RBP20.2■□□□□ 0.82
SNF8-206ENST00000509989 PPLO60437 1756 aa20.19■□□□□ 0.82
SNF8-206ENST00000509989 PPP1R15AO75807 674 aaPredicted RBP20.19■□□□□ 0.82
SNF8-206ENST00000509989 ZNF326Q5BKZ1 582 aaKnown RBP20.19■□□□□ 0.82
SNF8-206ENST00000509989 BCANQ96GW7 911 aa20.19■□□□□ 0.82
SNF8-206ENST00000509989 ALKQ9UM73 1620 aa20.18■□□□□ 0.82
SNF8-206ENST00000509989 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
SNF8-206ENST00000509989 IQSEC2Q5JU85 1478 aa20.16■□□□□ 0.82
SNF8-206ENST00000509989 NWD1Q149M9 1564 aa20.15■□□□□ 0.82
SNF8-206ENST00000509989 IFT172Q9UG01 1749 aa20.15■□□□□ 0.82
SNF8-206ENST00000509989 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.14■□□□□ 0.81
SNF8-206ENST00000509989 SPATA31E1Q6ZUB1 1445 aa20.13■□□□□ 0.81
SNF8-206ENST00000509989 CCDC144AA2RUR9 1427 aa20.12■□□□□ 0.81
SNF8-206ENST00000509989 PTPRUQ92729 1446 aa20.12■□□□□ 0.81
SNF8-206ENST00000509989 SETD1AO15047 1707 aaKnown RBP20.12■□□□□ 0.81
SNF8-206ENST00000509989 SETBP1Q9Y6X0 1596 aa20.12■□□□□ 0.81
SNF8-206ENST00000509989 RGL3Q3MIN7 710 aa20.11■□□□□ 0.81
SNF8-206ENST00000509989 KCNA6P17658 529 aa20.1■□□□□ 0.81
SNF8-206ENST00000509989 HDGFP51858 240 aaKnown RBP20.1■□□□□ 0.81
SNF8-206ENST00000509989 UBAP1LF5GYI3 381 aa20.09■□□□□ 0.81
SNF8-206ENST00000509989 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
SNF8-206ENST00000509989 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.81
SNF8-206ENST00000509989 DIP2AQ14689 1571 aa20.08■□□□□ 0.81
SNF8-206ENST00000509989 HRCP23327 699 aa20.08■□□□□ 0.81
SNF8-206ENST00000509989 METP08581 1390 aa20.08■□□□□ 0.8
SNF8-206ENST00000509989 TMEM94Q12767 1356 aa20.07■□□□□ 0.8
SNF8-206ENST00000509989 ADGRF5Q8IZF2 1346 aa20.06■□□□□ 0.8
SNF8-206ENST00000509989 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
SNF8-206ENST00000509989 PROSER2Q86WR7 435 aaPredicted RBP20.05■□□□□ 0.8
SNF8-206ENST00000509989 NKTRP30414 1462 aaKnown RBP20.03■□□□□ 0.8
SNF8-206ENST00000509989 PIP4K2BP78356 416 aa20.02■□□□□ 0.8
SNF8-206ENST00000509989 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.79
SNF8-206ENST00000509989 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.79
SNF8-206ENST00000509989 AMOTL2Q9Y2J4 779 aa20.01■□□□□ 0.79
SNF8-206ENST00000509989 VGFO15240 615 aaPredicted RBP19.99■□□□□ 0.79
SNF8-206ENST00000509989 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
SNF8-206ENST00000509989 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
SNF8-206ENST00000509989 PIK3R4Q99570 1358 aa19.97■□□□□ 0.79
SNF8-206ENST00000509989 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
SNF8-206ENST00000509989 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
SNF8-206ENST00000509989 TOM1O60784 492 aa19.95■□□□□ 0.78
SNF8-206ENST00000509989 PIK3C2GO75747 1445 aa19.93■□□□□ 0.78
SNF8-206ENST00000509989 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
SNF8-206ENST00000509989 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
SNF8-206ENST00000509989 HSPA1LP34931 641 aa19.92■□□□□ 0.78
SNF8-206ENST00000509989 TMEM132EQ6IEE7 984 aa19.92■□□□□ 0.78
SNF8-206ENST00000509989 NRXN1Q9ULB1 1477 aa19.92■□□□□ 0.78
SNF8-206ENST00000509989 ROBO2Q9HCK4 1378 aa19.91■□□□□ 0.78
SNF8-206ENST00000509989 MYOM2P54296 1465 aa19.9■□□□□ 0.78
SNF8-206ENST00000509989 ROBO1Q9Y6N7 1651 aa19.9■□□□□ 0.78
SNF8-206ENST00000509989 CFAP70Q5T0N1 1121 aa19.89■□□□□ 0.77
SNF8-206ENST00000509989 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
SNF8-206ENST00000509989 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
SNF8-206ENST00000509989 MSH6P52701 1360 aa19.87■□□□□ 0.77
SNF8-206ENST00000509989 DCAF11Q8TEB1 546 aa19.87■□□□□ 0.77
SNF8-206ENST00000509989 C14orf37Q86TY3 774 aa19.86■□□□□ 0.77
SNF8-206ENST00000509989 STK26Q9P289 416 aa19.86■□□□□ 0.77
SNF8-206ENST00000509989 KNDC1Q76NI1 1749 aa19.85■□□□□ 0.77
SNF8-206ENST00000509989 C14orf93Q9H972 538 aaKnown RBP19.84■□□□□ 0.77
SNF8-206ENST00000509989 NCOA3Q9Y6Q9 1424 aa19.84■□□□□ 0.77
SNF8-206ENST00000509989 PLEKHH1Q9ULM0 1364 aa19.83■□□□□ 0.77
SNF8-206ENST00000509989 PTCH1Q13635 1447 aa19.83■□□□□ 0.76
SNF8-206ENST00000509989 WAPLQ7Z5K2 1190 aa19.82■□□□□ 0.76
SNF8-206ENST00000509989 C19orf44Q9H6X5 657 aa19.82■□□□□ 0.76
SNF8-206ENST00000509989 LAMC1P11047 1609 aa19.82■□□□□ 0.76
SNF8-206ENST00000509989 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
SNF8-206ENST00000509989 SLAIN2Q9P270 581 aa19.81■□□□□ 0.76
SNF8-206ENST00000509989 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
SNF8-206ENST00000509989 ADGRL3Q9HAR2 1447 aa19.81■□□□□ 0.76
SNF8-206ENST00000509989 ADGRB1O14514 1584 aa19.81■□□□□ 0.76
SNF8-206ENST00000509989 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
SNF8-206ENST00000509989 LRPPRCP42704 1394 aaKnown RBP19.8■□□□□ 0.76
SNF8-206ENST00000509989 TECPR2O15040 1411 aa19.78■□□□□ 0.76
SNF8-206ENST00000509989 MST1RQ04912 1400 aa19.78■□□□□ 0.76
SNF8-206ENST00000509989 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
SNF8-206ENST00000509989 PHLPP1O60346 1717 aa19.76■□□□□ 0.75
SNF8-206ENST00000509989 ABCC11Q96J66 1382 aa19.76■□□□□ 0.75
SNF8-206ENST00000509989 ATF3P18847 181 aa19.76■□□□□ 0.75
SNF8-206ENST00000509989 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
SNF8-206ENST00000509989 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
SNF8-206ENST00000509989 CADPS2Q86UW7 1296 aa19.74■□□□□ 0.75
SNF8-206ENST00000509989 RGPD8O14715 1765 aaPredicted RBP19.74■□□□□ 0.75
SNF8-206ENST00000509989 DCCP43146 1447 aa19.73■□□□□ 0.75
SNF8-206ENST00000509989 COL16A1Q07092 1604 aaPredicted RBP19.73■□□□□ 0.75
SNF8-206ENST00000509989 BRINP3Q76B58 766 aa19.72■□□□□ 0.75
SNF8-206ENST00000509989 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
SNF8-206ENST00000509989 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms