RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 PLSCR2Q9NRY7 297 aa14.53□□□□□ -0.08
SPOCK1-207ENST00000509978 RSBN1LQ6PCB5 846 aaPredicted RBP14.52□□□□□ -0.09
SPOCK1-207ENST00000509978 COL9A1P20849 921 aa14.51□□□□□ -0.09
SPOCK1-207ENST00000509978 DNAJB2P25686 324 aa14.51□□□□□ -0.09
SPOCK1-207ENST00000509978 PPP4R3BQ5MIZ7 849 aa14.51□□□□□ -0.09
SPOCK1-207ENST00000509978 PPP1R3GB7ZBB8 358 aa14.5□□□□□ -0.09
SPOCK1-207ENST00000509978 NUTM1Q86Y26 1132 aa14.5□□□□□ -0.09
SPOCK1-207ENST00000509978 TSKSQ9UJT2 592 aa14.5□□□□□ -0.09
SPOCK1-207ENST00000509978 ZNF330Q9Y3S2 320 aaPredicted RBP14.5□□□□□ -0.09
SPOCK1-207ENST00000509978 MTMR14Q8NCE2 650 aa14.49□□□□□ -0.09
SPOCK1-207ENST00000509978 TMEM134Q9H6X4 195 aa14.48□□□□□ -0.09
SPOCK1-207ENST00000509978 LHX6Q9UPM6 363 aa14.48□□□□□ -0.09
SPOCK1-207ENST00000509978 ZBTB7CA1YPR0 619 aa14.47□□□□□ -0.09
SPOCK1-207ENST00000509978 NBPF26B4DH59 902 aa14.47□□□□□ -0.09
SPOCK1-207ENST00000509978 LILRB3O75022 631 aa14.47□□□□□ -0.09
SPOCK1-207ENST00000509978 NUDT18Q6ZVK8 323 aa14.47□□□□□ -0.09
SPOCK1-207ENST00000509978 WWC1Q8IX03 1113 aa14.46□□□□□ -0.09
SPOCK1-207ENST00000509978 PRM3Q9NNZ6 103 aa14.46□□□□□ -0.09
SPOCK1-207ENST00000509978 MOXD2PA6NHM9 499 aa14.45□□□□□ -0.1
SPOCK1-207ENST00000509978 PTPREP23469 700 aa14.45□□□□□ -0.1
SPOCK1-207ENST00000509978 TATDN2Q93075 761 aa14.45□□□□□ -0.1
SPOCK1-207ENST00000509978 TRAIPQ9BWF2 469 aa14.45□□□□□ -0.1
SPOCK1-207ENST00000509978 DDX11L8A8MPP1 907 aa14.44□□□□□ -0.1
SPOCK1-207ENST00000509978 PACS2Q86VP3 889 aa14.44□□□□□ -0.1
SPOCK1-207ENST00000509978 TRIM6-TRIM34B2RNG4 842 aa14.43□□□□□ -0.1
SPOCK1-207ENST00000509978 PRPF38BQ5VTL8 546 aaKnown RBP14.43□□□□□ -0.1
SPOCK1-207ENST00000509978 C3orf80F5H4A9 247 aa14.42□□□□□ -0.1
SPOCK1-207ENST00000509978 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
SPOCK1-207ENST00000509978 GDPD2Q9HCC8 539 aa14.42□□□□□ -0.1
SPOCK1-207ENST00000509978 PNMA3Q9UL41 463 aa14.41□□□□□ -0.1
SPOCK1-207ENST00000509978 QPCTQ16769 361 aa14.4□□□□□ -0.1
SPOCK1-207ENST00000509978 POTEJP0CG39 1038 aa14.39□□□□□ -0.11
SPOCK1-207ENST00000509978 NDUFV2P19404 249 aa14.38□□□□□ -0.11
SPOCK1-207ENST00000509978 USP46P62068 366 aa14.38□□□□□ -0.11
SPOCK1-207ENST00000509978 NECTIN2Q92692 538 aa14.38□□□□□ -0.11
SPOCK1-207ENST00000509978 PCDHB15Q9Y5E8 787 aa14.38□□□□□ -0.11
SPOCK1-207ENST00000509978 KDM4AO75164 1064 aa14.36□□□□□ -0.11
SPOCK1-207ENST00000509978 CSPP1Q1MSJ5 1256 aa14.36□□□□□ -0.11
SPOCK1-207ENST00000509978 RTL5Q5HYW3 569 aaPredicted RBP14.36□□□□□ -0.11
SPOCK1-207ENST00000509978 PPP1R15AO75807 674 aaPredicted RBP14.35□□□□□ -0.11
SPOCK1-207ENST00000509978 AP1G2O75843 785 aa14.35□□□□□ -0.11
SPOCK1-207ENST00000509978 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
SPOCK1-207ENST00000509978 GCGRP47871 477 aa14.34□□□□□ -0.11
SPOCK1-207ENST00000509978 RSPH4AQ5TD94 716 aa14.34□□□□□ -0.11
SPOCK1-207ENST00000509978 KCTD17Q8N5Z5 321 aa14.34□□□□□ -0.11
SPOCK1-207ENST00000509978 NUTM2BA6NNL0 878 aaPredicted RBP14.33□□□□□ -0.12
SPOCK1-207ENST00000509978 NUTM2EB1AL46 878 aaPredicted RBP14.33□□□□□ -0.12
SPOCK1-207ENST00000509978 NUTM2DQ5VT03 806 aaPredicted RBP14.33□□□□□ -0.12
SPOCK1-207ENST00000509978 NUTM2AQ8IVF1 878 aaPredicted RBP14.33□□□□□ -0.12
SPOCK1-207ENST00000509978 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
SPOCK1-207ENST00000509978 ABL2P42684 1182 aa14.32□□□□□ -0.12
SPOCK1-207ENST00000509978 POTEHQ6S545 545 aa14.32□□□□□ -0.12
SPOCK1-207ENST00000509978 RDH13Q8NBN7 331 aa14.32□□□□□ -0.12
SPOCK1-207ENST00000509978 ZBTB3Q9H5J0 574 aa14.32□□□□□ -0.12
SPOCK1-207ENST00000509978 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
SPOCK1-207ENST00000509978 MAMSTRQ6ZN01 415 aa14.31□□□□□ -0.12
SPOCK1-207ENST00000509978 CALR3Q96L12 384 aaKnown RBP14.31□□□□□ -0.12
SPOCK1-207ENST00000509978 HOXA2O43364 376 aa14.29□□□□□ -0.12
SPOCK1-207ENST00000509978 HOXB1P14653 301 aaPredicted RBP14.29□□□□□ -0.12
SPOCK1-207ENST00000509978 RANGAP1P46060 587 aaPredicted RBP14.29□□□□□ -0.12
SPOCK1-207ENST00000509978 CABLES1Q8TDN4 633 aa14.29□□□□□ -0.12
SPOCK1-207ENST00000509978 SCUBE2Q9NQ36 999 aa14.29□□□□□ -0.12
SPOCK1-207ENST00000509978 CCDC9Q9Y3X0 531 aaKnown RBP14.29□□□□□ -0.12
SPOCK1-207ENST00000509978 GJD4Q96KN9 370 aaPredicted RBP14.28□□□□□ -0.12
SPOCK1-207ENST00000509978 FDX1P10109 184 aa14.27□□□□□ -0.13
SPOCK1-207ENST00000509978 GLMNQ92990 594 aa14.27□□□□□ -0.13
SPOCK1-207ENST00000509978 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.13
SPOCK1-207ENST00000509978 SMAPO00193 183 aa14.26□□□□□ -0.13
SPOCK1-207ENST00000509978 SNPHO15079 494 aa14.26□□□□□ -0.13
SPOCK1-207ENST00000509978 PROX2Q3B8N5 592 aa14.26□□□□□ -0.13
SPOCK1-207ENST00000509978 POM121CA8CG34 1229 aa14.25□□□□□ -0.13
SPOCK1-207ENST00000509978 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
SPOCK1-207ENST00000509978 PDE4CQ08493 712 aa14.24□□□□□ -0.13
SPOCK1-207ENST00000509978 WASHC4Q2M389 1173 aa14.24□□□□□ -0.13
SPOCK1-207ENST00000509978 RETREG2Q8NC44 543 aa14.24□□□□□ -0.13
SPOCK1-207ENST00000509978 ACIN1Q9UKV3 1341 aaKnown RBP14.23□□□□□ -0.13
SPOCK1-207ENST00000509978 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
SPOCK1-207ENST00000509978 KIAA1468Q9P260 1216 aa14.23□□□□□ -0.13
SPOCK1-207ENST00000509978 PCDHGC3Q9UN70 934 aa14.23□□□□□ -0.13
SPOCK1-207ENST00000509978 IRF5Q13568 498 aa14.22□□□□□ -0.13
SPOCK1-207ENST00000509978 ZBED2Q9BTP6 218 aa14.22□□□□□ -0.13
SPOCK1-207ENST00000509978 SLC10A3P09131 477 aa14.21□□□□□ -0.13
SPOCK1-207ENST00000509978 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.13
SPOCK1-207ENST00000509978 KCNK17Q96T54 332 aa14.21□□□□□ -0.13
SPOCK1-207ENST00000509978 MTMR2Q13614 643 aa14.19□□□□□ -0.14
SPOCK1-207ENST00000509978 CTDSPL2Q05D32 466 aa14.18□□□□□ -0.14
SPOCK1-207ENST00000509978 SLC4A5Q9BY07 1137 aa14.18□□□□□ -0.14
SPOCK1-207ENST00000509978 TRIM34Q9BYJ4 488 aa14.18□□□□□ -0.14
SPOCK1-207ENST00000509978 RABGEF1Q9UJ41 708 aa14.18□□□□□ -0.14
SPOCK1-207ENST00000509978 SWT1Q5T5J6 900 aaKnown RBP14.17□□□□□ -0.14
SPOCK1-207ENST00000509978 HDGFL1Q5TGJ6 251 aa14.17□□□□□ -0.14
SPOCK1-207ENST00000509978 HELBQ8NG08 1087 aaPredicted RBP14.17□□□□□ -0.14
SPOCK1-207ENST00000509978 GPR37L1O60883 481 aa14.16□□□□□ -0.14
SPOCK1-207ENST00000509978 GRIPAP1Q4V328 841 aa14.16□□□□□ -0.14
SPOCK1-207ENST00000509978 HDGFP51858 240 aaKnown RBP14.15□□□□□ -0.14
SPOCK1-207ENST00000509978 HMX1Q9NP08 348 aaPredicted RBP14.15□□□□□ -0.14
SPOCK1-207ENST00000509978 PBXIP1Q96AQ6 731 aa14.14□□□□□ -0.15
SPOCK1-207ENST00000509978 SLC4A3P48751 1232 aa14.13□□□□□ -0.15
SPOCK1-207ENST00000509978 ADAMTS19Q8TE59 1207 aa14.13□□□□□ -0.15
SPOCK1-207ENST00000509978 GUCA2AQ02747 115 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms