RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 CHIC1Q5VXU3 224 aa31.08■■■□□ 2.57
SPOCK1-207ENST00000509978 AEBP2Q6ZN18 517 aaPredicted RBP30.71■■■□□ 2.51
SPOCK1-207ENST00000509978 PHF23Q9BUL5 403 aaPredicted RBP27.43■■□□□ 1.98
SPOCK1-207ENST00000509978 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
SPOCK1-207ENST00000509978 PLPPR3Q6T4P5 718 aa25.72■■□□□ 1.71
SPOCK1-207ENST00000509978 ADRA2BP18089 450 aa23.97■■□□□ 1.43
SPOCK1-207ENST00000509978 FOXD1Q16676 465 aa23.89■■□□□ 1.41
SPOCK1-207ENST00000509978 PPP6R1Q9UPN7 881 aa23.82■■□□□ 1.4
SPOCK1-207ENST00000509978 KCNA4P22459 653 aa23.41■■□□□ 1.34
SPOCK1-207ENST00000509978 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
SPOCK1-207ENST00000509978 PPP4R3CPQ6ZMV5 832 aa22.76■■□□□ 1.23
SPOCK1-207ENST00000509978 PIAS4Q8N2W9 510 aaPredicted RBP22.75■■□□□ 1.23
SPOCK1-207ENST00000509978 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
SPOCK1-207ENST00000509978 SLC4A1APQ9BWU0 796 aaKnown RBP22.5■■□□□ 1.19
SPOCK1-207ENST00000509978 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
SPOCK1-207ENST00000509978 NPM3O75607 178 aaKnown RBP22.15■■□□□ 1.14
SPOCK1-207ENST00000509978 CNKSR2Q8WXI2 1034 aa21.93■■□□□ 1.1
SPOCK1-207ENST00000509978 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
SPOCK1-207ENST00000509978 MSH5O43196 834 aa21.67■■□□□ 1.06
SPOCK1-207ENST00000509978 ZBTB22O15209 634 aa21.57■■□□□ 1.04
SPOCK1-207ENST00000509978 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
SPOCK1-207ENST00000509978 MAPK8IP2Q13387 824 aaPredicted RBP21.29■■□□□ 1
SPOCK1-207ENST00000509978 FOXD4L1Q9NU39 408 aa21.29■■□□□ 1
SPOCK1-207ENST00000509978 RNF216Q9NWF9 866 aaPredicted RBP21.25■□□□□ 0.99
SPOCK1-207ENST00000509978 HOXD11P31277 338 aaPredicted RBP20.9■□□□□ 0.94
SPOCK1-207ENST00000509978 DMRT2Q9Y5R5 561 aa20.88■□□□□ 0.93
SPOCK1-207ENST00000509978 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
SPOCK1-207ENST00000509978 ATXN8OSP0DMR3 200 aa20.54■□□□□ 0.88
SPOCK1-207ENST00000509978 MYCNP04198 464 aaPredicted RBP20.46■□□□□ 0.87
SPOCK1-207ENST00000509978 AMER1Q5JTC6 1135 aaPredicted RBP20.26■□□□□ 0.83
SPOCK1-207ENST00000509978 RTN4Q9NQC3 1192 aaKnown RBP20.16■□□□□ 0.82
SPOCK1-207ENST00000509978 FKBP8Q14318 412 aa20.07■□□□□ 0.8
SPOCK1-207ENST00000509978 SLC24A1O60721 1099 aa19.98■□□□□ 0.79
SPOCK1-207ENST00000509978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.83■□□□□ 0.77
SPOCK1-207ENST00000509978 HNRNPUL2Q1KMD3 747 aaKnown RBP19.83■□□□□ 0.77
SPOCK1-207ENST00000509978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.81■□□□□ 0.76
SPOCK1-207ENST00000509978 SAMD1Q6SPF0 538 aaPredicted RBP19.79■□□□□ 0.76
SPOCK1-207ENST00000509978 ATF5Q9Y2D1 282 aaPredicted RBP19.77■□□□□ 0.76
SPOCK1-207ENST00000509978 DCAF8L1A6NGE4 600 aa19.74■□□□□ 0.75
SPOCK1-207ENST00000509978 U3KPZ7 1027 aaPredicted RBP19.64■□□□□ 0.73
SPOCK1-207ENST00000509978 ZNF219Q9P2Y4 722 aaPredicted RBP19.39■□□□□ 0.69
SPOCK1-207ENST00000509978 APLP2Q06481 763 aa19.37■□□□□ 0.69
SPOCK1-207ENST00000509978 FBXO3Q9UK99 471 aa19.17■□□□□ 0.66
SPOCK1-207ENST00000509978 SPDYE4A6NLX3 237 aa19.08■□□□□ 0.64
SPOCK1-207ENST00000509978 PROM2Q8N271 834 aa19.04■□□□□ 0.64
SPOCK1-207ENST00000509978 MKRN4PQ13434 485 aaPredicted RBP19.01■□□□□ 0.63
SPOCK1-207ENST00000509978 FBLN2P98095 1184 aa18.9■□□□□ 0.62
SPOCK1-207ENST00000509978 VASPP50552 380 aaPredicted RBP18.83■□□□□ 0.6
SPOCK1-207ENST00000509978 POLA2Q14181 598 aa18.75■□□□□ 0.59
SPOCK1-207ENST00000509978 TRHP20396 242 aaPredicted RBP18.74■□□□□ 0.59
SPOCK1-207ENST00000509978 SPINK5Q9NQ38 1064 aaPredicted RBP18.73■□□□□ 0.59
SPOCK1-207ENST00000509978 RNF39Q9H2S5 420 aa18.67■□□□□ 0.58
SPOCK1-207ENST00000509978 IFNLR1Q8IU57 520 aaPredicted RBP18.66■□□□□ 0.58
SPOCK1-207ENST00000509978 PLCB2Q00722 1185 aa18.64■□□□□ 0.57
SPOCK1-207ENST00000509978 CAPN15O75808 1086 aa18.59■□□□□ 0.57
SPOCK1-207ENST00000509978 ZBTB12Q9Y330 459 aaPredicted RBP18.59■□□□□ 0.57
SPOCK1-207ENST00000509978 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
SPOCK1-207ENST00000509978 PKD2Q13563 968 aa18.46■□□□□ 0.55
SPOCK1-207ENST00000509978 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
SPOCK1-207ENST00000509978 ABCB7O75027 752 aa18.29■□□□□ 0.52
SPOCK1-207ENST00000509978 HAP1P54257 671 aaPredicted RBP18.28■□□□□ 0.52
SPOCK1-207ENST00000509978 STAG3Q9UJ98 1225 aa18.28■□□□□ 0.52
SPOCK1-207ENST00000509978 SPOCK2Q92563 424 aa18.27■□□□□ 0.52
SPOCK1-207ENST00000509978 ZNF692Q9BU19 519 aaPredicted RBP18.21■□□□□ 0.51
SPOCK1-207ENST00000509978 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
SPOCK1-207ENST00000509978 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
SPOCK1-207ENST00000509978 SPDYE2BA6NHP3 402 aa18.17■□□□□ 0.5
SPOCK1-207ENST00000509978 SPDYE6P0CI01 402 aa18.17■□□□□ 0.5
SPOCK1-207ENST00000509978 SPDYE2Q495Y8 402 aa18.17■□□□□ 0.5
SPOCK1-207ENST00000509978 SSUH2Q9Y2M2 353 aa18.15■□□□□ 0.5
SPOCK1-207ENST00000509978 BBXQ8WY36 941 aaPredicted RBP18.12■□□□□ 0.49
SPOCK1-207ENST00000509978 DSG3P32926 999 aa18.11■□□□□ 0.49
SPOCK1-207ENST00000509978 ECM2O94769 699 aaPredicted RBP18.1■□□□□ 0.49
SPOCK1-207ENST00000509978 BCANQ96GW7 911 aa18.07■□□□□ 0.48
SPOCK1-207ENST00000509978 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.07■□□□□ 0.48
SPOCK1-207ENST00000509978 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
SPOCK1-207ENST00000509978 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
SPOCK1-207ENST00000509978 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
SPOCK1-207ENST00000509978 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
SPOCK1-207ENST00000509978 MIER1Q8N108 512 aa17.96■□□□□ 0.47
SPOCK1-207ENST00000509978 RGL2O15211 777 aa17.89■□□□□ 0.45
SPOCK1-207ENST00000509978 PAXIP1Q6ZW49 1069 aaPredicted RBP17.88■□□□□ 0.45
SPOCK1-207ENST00000509978 ZBTB47Q9UFB7 747 aaPredicted RBP17.87■□□□□ 0.45
SPOCK1-207ENST00000509978 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
SPOCK1-207ENST00000509978 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
SPOCK1-207ENST00000509978 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
SPOCK1-207ENST00000509978 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
SPOCK1-207ENST00000509978 CFAP44Q96MT7 982 aa17.79■□□□□ 0.44
SPOCK1-207ENST00000509978 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
SPOCK1-207ENST00000509978 TAOK2Q9UL54 1235 aa17.77■□□□□ 0.44
SPOCK1-207ENST00000509978 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
SPOCK1-207ENST00000509978 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
SPOCK1-207ENST00000509978 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
SPOCK1-207ENST00000509978 TSHZ2Q9NRE2 1034 aa17.61■□□□□ 0.41
SPOCK1-207ENST00000509978 HS6ST3Q8IZP7 471 aa17.57■□□□□ 0.4
SPOCK1-207ENST00000509978 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
SPOCK1-207ENST00000509978 GSE1Q14687 1217 aa17.55■□□□□ 0.4
SPOCK1-207ENST00000509978 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
SPOCK1-207ENST00000509978 NUBP1P53384 320 aa17.45■□□□□ 0.38
SPOCK1-207ENST00000509978 RNF25Q96BH1 459 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms