RNA–Protein interactions for RNA: ENST00000509765.1

SPOP-215, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 613 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-215ENST00000509765 NWD1Q149M9 1564 aa24.33■■□□□ 1.48
SPOP-215ENST00000509765 TMEM131LA2VDJ0 1609 aa24.32■■□□□ 1.48
SPOP-215ENST00000509765 GCC2Q8IWJ2 1684 aa24.32■■□□□ 1.48
SPOP-215ENST00000509765 PPARGC1BQ86YN6 1023 aaKnown RBP24.32■■□□□ 1.48
SPOP-215ENST00000509765 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
SPOP-215ENST00000509765 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
SPOP-215ENST00000509765 RIMS2Q9UQ26 1411 aa24.31■■□□□ 1.48
SPOP-215ENST00000509765 BCANQ96GW7 911 aa24.3■■□□□ 1.48
SPOP-215ENST00000509765 E9PCH4 1651 aa24.3■■□□□ 1.48
SPOP-215ENST00000509765 RGS17Q9UGC6 210 aaPredicted RBP24.29■■□□□ 1.48
SPOP-215ENST00000509765 PLEKHG1Q9ULL1 1385 aa24.29■■□□□ 1.48
SPOP-215ENST00000509765 NUTM2DQ5VT03 806 aaPredicted RBP24.28■■□□□ 1.48
SPOP-215ENST00000509765 ROCK1Q13464 1354 aa24.28■■□□□ 1.48
SPOP-215ENST00000509765 NKTRP30414 1462 aaKnown RBP24.27■■□□□ 1.48
SPOP-215ENST00000509765 ITGAEP38570 1179 aa24.27■■□□□ 1.48
SPOP-215ENST00000509765 ROBO1Q9Y6N7 1651 aa24.26■■□□□ 1.47
SPOP-215ENST00000509765 CHGAP10645 457 aaKnown RBP24.25■■□□□ 1.47
SPOP-215ENST00000509765 IQGAP3Q86VI3 1631 aa24.24■■□□□ 1.47
SPOP-215ENST00000509765 PPP1R15AO75807 674 aaPredicted RBP24.23■■□□□ 1.47
SPOP-215ENST00000509765 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
SPOP-215ENST00000509765 CHD2O14647 1828 aaKnown RBP24.21■■□□□ 1.47
SPOP-215ENST00000509765 NUP155O75694 1391 aa24.21■■□□□ 1.47
SPOP-215ENST00000509765 TBX22Q9Y458 520 aa24.19■■□□□ 1.46
SPOP-215ENST00000509765 MSH6P52701 1360 aa24.18■■□□□ 1.46
SPOP-215ENST00000509765 SLAIN2Q9P270 581 aa24.17■■□□□ 1.46
SPOP-215ENST00000509765 HDGFP51858 240 aaKnown RBP24.15■■□□□ 1.46
SPOP-215ENST00000509765 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.15■■□□□ 1.46
SPOP-215ENST00000509765 PTPRUQ92729 1446 aa24.13■■□□□ 1.45
SPOP-215ENST00000509765 POTEAQ6S8J7 498 aa24.13■■□□□ 1.45
SPOP-215ENST00000509765 PHLPP1O60346 1717 aa24.09■■□□□ 1.45
SPOP-215ENST00000509765 DIP2AQ14689 1571 aa24.08■■□□□ 1.45
SPOP-215ENST00000509765 NRXN3Q9Y4C0 1643 aa24.07■■□□□ 1.44
SPOP-215ENST00000509765 AMOTL2Q9Y2J4 779 aa24.06■■□□□ 1.44
SPOP-215ENST00000509765 NCOA3Q9Y6Q9 1424 aa24.06■■□□□ 1.44
SPOP-215ENST00000509765 COL16A1Q07092 1604 aaPredicted RBP24.06■■□□□ 1.44
SPOP-215ENST00000509765 PIK3R4Q99570 1358 aa24.05■■□□□ 1.44
SPOP-215ENST00000509765 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.05■■□□□ 1.44
SPOP-215ENST00000509765 C14orf37Q86TY3 774 aa24.05■■□□□ 1.44
SPOP-215ENST00000509765 TRPM2O94759 1503 aa24.04■■□□□ 1.44
SPOP-215ENST00000509765 SPHKAPQ2M3C7 1700 aa24.04■■□□□ 1.44
SPOP-215ENST00000509765 JCADQ9P266 1359 aa24.03■■□□□ 1.44
SPOP-215ENST00000509765 C19orf44Q9H6X5 657 aa24.02■■□□□ 1.44
SPOP-215ENST00000509765 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
SPOP-215ENST00000509765 LRP6O75581 1613 aa24■■□□□ 1.43
SPOP-215ENST00000509765 CLTCL1P53675 1640 aa24■■□□□ 1.43
SPOP-215ENST00000509765 METP08581 1390 aa24■■□□□ 1.43
SPOP-215ENST00000509765 NAIPQ13075 1403 aa24■■□□□ 1.43
SPOP-215ENST00000509765 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
SPOP-215ENST00000509765 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
SPOP-215ENST00000509765 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
SPOP-215ENST00000509765 CADPS2Q86UW7 1296 aa23.98■■□□□ 1.43
SPOP-215ENST00000509765 ATF3P18847 181 aa23.97■■□□□ 1.43
SPOP-215ENST00000509765 AHDC1Q5TGY3 1603 aaPredicted RBP23.96■■□□□ 1.43
SPOP-215ENST00000509765 NEXMIFQ5QGS0 1516 aa23.96■■□□□ 1.43
SPOP-215ENST00000509765 BRINP3Q76B58 766 aa23.96■■□□□ 1.43
SPOP-215ENST00000509765 MST1RQ04912 1400 aa23.91■■□□□ 1.42
SPOP-215ENST00000509765 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
SPOP-215ENST00000509765 SPATA31A6Q5VVP1 1343 aa23.88■■□□□ 1.41
SPOP-215ENST00000509765 DCCP43146 1447 aa23.88■■□□□ 1.41
SPOP-215ENST00000509765 ASXL1Q8IXJ9 1541 aa23.88■■□□□ 1.41
SPOP-215ENST00000509765 SHPRHQ149N8 1683 aa23.87■■□□□ 1.41
SPOP-215ENST00000509765 DDX17Q92841 729 aaKnown RBP23.87■■□□□ 1.41
SPOP-215ENST00000509765 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
SPOP-215ENST00000509765 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
SPOP-215ENST00000509765 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
SPOP-215ENST00000509765 ADGRL3Q9HAR2 1447 aa23.84■■□□□ 1.41
SPOP-215ENST00000509765 NUTM2BA6NNL0 878 aaPredicted RBP23.82■■□□□ 1.4
SPOP-215ENST00000509765 NUTM2EB1AL46 878 aaPredicted RBP23.82■■□□□ 1.4
SPOP-215ENST00000509765 MEX3CQ5U5Q3 659 aaKnown RBP23.82■■□□□ 1.4
SPOP-215ENST00000509765 NUTM2AQ8IVF1 878 aaPredicted RBP23.82■■□□□ 1.4
SPOP-215ENST00000509765 KIF1BO60333 1816 aa23.81■■□□□ 1.4
SPOP-215ENST00000509765 NHSL1Q5SYE7 1610 aa23.81■■□□□ 1.4
SPOP-215ENST00000509765 FOXD1Q16676 465 aa23.8■■□□□ 1.4
SPOP-215ENST00000509765 SETD5Q9C0A6 1442 aa23.8■■□□□ 1.4
SPOP-215ENST00000509765 ROBO2Q9HCK4 1378 aa23.79■■□□□ 1.4
SPOP-215ENST00000509765 SLC4A1APQ9BWU0 796 aaKnown RBP23.78■■□□□ 1.4
SPOP-215ENST00000509765 VGFO15240 615 aaPredicted RBP23.75■■□□□ 1.39
SPOP-215ENST00000509765 ZNF772Q68DY9 489 aaPredicted RBP23.75■■□□□ 1.39
SPOP-215ENST00000509765 C1orf167Q5SNV9 1468 aa23.75■■□□□ 1.39
SPOP-215ENST00000509765 PTCH1Q13635 1447 aa23.74■■□□□ 1.39
SPOP-215ENST00000509765 ORAI2Q96SN7 254 aa23.73■■□□□ 1.39
SPOP-215ENST00000509765 PNPLA6Q8IY17 1366 aa23.73■■□□□ 1.39
SPOP-215ENST00000509765 LRRC59Q96AG4 307 aaKnown RBP23.72■■□□□ 1.39
SPOP-215ENST00000509765 PPLO60437 1756 aa23.71■■□□□ 1.39
SPOP-215ENST00000509765 AFF2P51816 1311 aa23.71■■□□□ 1.39
SPOP-215ENST00000509765 RPGRIP1LQ68CZ1 1315 aa23.71■■□□□ 1.39
SPOP-215ENST00000509765 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
SPOP-215ENST00000509765 ADGRF5Q8IZF2 1346 aa23.68■■□□□ 1.38
SPOP-215ENST00000509765 RXRBP28702 533 aa23.67■■□□□ 1.38
SPOP-215ENST00000509765 UPF1Q92900 1129 aaKnown RBP eCLIP23.66■■□□□ 1.38
SPOP-215ENST00000509765 LAMC1P11047 1609 aa23.66■■□□□ 1.38
SPOP-215ENST00000509765 C8orf37Q96NL8 207 aa23.65■■□□□ 1.38
SPOP-215ENST00000509765 SPATA31E1Q6ZUB1 1445 aa23.64■■□□□ 1.37
SPOP-215ENST00000509765 SOS2Q07890 1332 aaPredicted RBP23.63■■□□□ 1.37
SPOP-215ENST00000509765 RGL3Q3MIN7 710 aa23.63■■□□□ 1.37
SPOP-215ENST00000509765 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
SPOP-215ENST00000509765 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
SPOP-215ENST00000509765 CCDC144AA2RUR9 1427 aa23.6■■□□□ 1.37
SPOP-215ENST00000509765 WAPLQ7Z5K2 1190 aa23.59■■□□□ 1.37
SPOP-215ENST00000509765 QTRT2Q9H974 415 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 685.2 ms