RNA–Protein interactions for RNA: ENST00000508183.5

SH3TC1-214, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 1,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-214ENST00000508183 FOXD1Q16676 465 aa27.67■■■□□ 2.02
SH3TC1-214ENST00000508183 TRPM2O94759 1503 aa27.64■■■□□ 2.02
SH3TC1-214ENST00000508183 TOM1O60784 492 aa27.6■■■□□ 2.01
SH3TC1-214ENST00000508183 CLTCL1P53675 1640 aa27.58■■■□□ 2.01
SH3TC1-214ENST00000508183 SCAF1Q9H7N4 1312 aaKnown RBP27.58■■■□□ 2.01
SH3TC1-214ENST00000508183 CHGAP10645 457 aaKnown RBP27.57■■■□□ 2
SH3TC1-214ENST00000508183 HDGFP51858 240 aaKnown RBP27.57■■■□□ 2
SH3TC1-214ENST00000508183 BCANQ96GW7 911 aa27.56■■■□□ 2
SH3TC1-214ENST00000508183 LRRC7Q96NW7 1537 aa27.54■■■□□ 2
SH3TC1-214ENST00000508183 PPP1R15AO75807 674 aaPredicted RBP27.54■■■□□ 2
SH3TC1-214ENST00000508183 STRCP1A6NGW2 1772 aa27.53■■■□□ 2
SH3TC1-214ENST00000508183 DHX57Q6P158 1386 aaKnown RBP27.53■■■□□ 2
SH3TC1-214ENST00000508183 PIP4K2BP78356 416 aa27.52■■■□□ 2
SH3TC1-214ENST00000508183 ANKRD30BQ9BXX2 1392 aa27.52■■■□□ 2
SH3TC1-214ENST00000508183 TMEM131LA2VDJ0 1609 aa27.52■■■□□ 2
SH3TC1-214ENST00000508183 SLC26A8Q96RN1 970 aa27.51■■□□□ 1.99
SH3TC1-214ENST00000508183 RIMS2Q9UQ26 1411 aa27.51■■□□□ 1.99
SH3TC1-214ENST00000508183 MYO5BQ9ULV0 1848 aa27.5■■□□□ 1.99
SH3TC1-214ENST00000508183 ZFYVE9O95405 1425 aa27.49■■□□□ 1.99
SH3TC1-214ENST00000508183 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.48■■□□□ 1.99
SH3TC1-214ENST00000508183 CCDC144AA2RUR9 1427 aa27.47■■□□□ 1.99
SH3TC1-214ENST00000508183 PLEKHG1Q9ULL1 1385 aa27.46■■□□□ 1.99
SH3TC1-214ENST00000508183 KCNA6P17658 529 aa27.44■■□□□ 1.98
SH3TC1-214ENST00000508183 SENP3Q9H4L4 574 aaPredicted RBP27.44■■□□□ 1.98
SH3TC1-214ENST00000508183 KIF1BO60333 1816 aa27.44■■□□□ 1.98
SH3TC1-214ENST00000508183 DISP3Q9P2K9 1392 aa27.4■■□□□ 1.98
SH3TC1-214ENST00000508183 SPATA31E1Q6ZUB1 1445 aa27.39■■□□□ 1.97
SH3TC1-214ENST00000508183 HSPA1LP34931 641 aa27.38■■□□□ 1.97
SH3TC1-214ENST00000508183 NUTM2DQ5VT03 806 aaPredicted RBP27.38■■□□□ 1.97
SH3TC1-214ENST00000508183 PROSER2Q86WR7 435 aaPredicted RBP27.38■■□□□ 1.97
SH3TC1-214ENST00000508183 NKTRP30414 1462 aaKnown RBP27.37■■□□□ 1.97
SH3TC1-214ENST00000508183 TMEM94Q12767 1356 aa27.37■■□□□ 1.97
SH3TC1-214ENST00000508183 ALKQ9UM73 1620 aa27.36■■□□□ 1.97
SH3TC1-214ENST00000508183 NWD1Q149M9 1564 aa27.35■■□□□ 1.97
SH3TC1-214ENST00000508183 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
SH3TC1-214ENST00000508183 TBX22Q9Y458 520 aa27.34■■□□□ 1.97
SH3TC1-214ENST00000508183 NEXMIFQ5QGS0 1516 aa27.32■■□□□ 1.96
SH3TC1-214ENST00000508183 XIRP1Q702N8 1843 aaKnown RBP27.31■■□□□ 1.96
SH3TC1-214ENST00000508183 DIP2AQ14689 1571 aa27.31■■□□□ 1.96
SH3TC1-214ENST00000508183 ADAMTS13Q76LX8 1427 aa27.28■■□□□ 1.96
SH3TC1-214ENST00000508183 RBM33Q96EV2 1170 aaKnown RBP27.28■■□□□ 1.96
SH3TC1-214ENST00000508183 PPLO60437 1756 aa27.26■■□□□ 1.95
SH3TC1-214ENST00000508183 PIK3R4Q99570 1358 aa27.26■■□□□ 1.95
SH3TC1-214ENST00000508183 MSH6P52701 1360 aa27.25■■□□□ 1.95
SH3TC1-214ENST00000508183 CHD2O14647 1828 aaKnown RBP27.25■■□□□ 1.95
SH3TC1-214ENST00000508183 RGL3Q3MIN7 710 aa27.25■■□□□ 1.95
SH3TC1-214ENST00000508183 IFT172Q9UG01 1749 aa27.25■■□□□ 1.95
SH3TC1-214ENST00000508183 SIN3AQ96ST3 1273 aa27.24■■□□□ 1.95
SH3TC1-214ENST00000508183 RPGRIP1LQ68CZ1 1315 aa27.22■■□□□ 1.95
SH3TC1-214ENST00000508183 C14orf37Q86TY3 774 aa27.21■■□□□ 1.95
SH3TC1-214ENST00000508183 SETBP1Q9Y6X0 1596 aa27.19■■□□□ 1.94
SH3TC1-214ENST00000508183 FAM135BQ49AJ0 1406 aa27.19■■□□□ 1.94
SH3TC1-214ENST00000508183 NCOA3Q9Y6Q9 1424 aa27.17■■□□□ 1.94
SH3TC1-214ENST00000508183 NRXN3Q9Y4C0 1643 aa27.17■■□□□ 1.94
SH3TC1-214ENST00000508183 AMOTL2Q9Y2J4 779 aa27.16■■□□□ 1.94
SH3TC1-214ENST00000508183 NEUROD1Q13562 356 aa27.15■■□□□ 1.94
SH3TC1-214ENST00000508183 MYOM2P54296 1465 aa27.13■■□□□ 1.93
SH3TC1-214ENST00000508183 VGFO15240 615 aaPredicted RBP27.13■■□□□ 1.93
SH3TC1-214ENST00000508183 ADGRF5Q8IZF2 1346 aa27.12■■□□□ 1.93
SH3TC1-214ENST00000508183 MED1Q15648 1581 aaPredicted RBP27.12■■□□□ 1.93
SH3TC1-214ENST00000508183 CLSPNQ9HAW4 1339 aa27.11■■□□□ 1.93
SH3TC1-214ENST00000508183 SLAIN2Q9P270 581 aa27.11■■□□□ 1.93
SH3TC1-214ENST00000508183 NRXN1Q9ULB1 1477 aa27.11■■□□□ 1.93
SH3TC1-214ENST00000508183 PTPRUQ92729 1446 aa27.11■■□□□ 1.93
SH3TC1-214ENST00000508183 ILDR2Q71H61 639 aa27.1■■□□□ 1.93
SH3TC1-214ENST00000508183 CCER1Q8TC90 406 aaPredicted RBP27.1■■□□□ 1.93
SH3TC1-214ENST00000508183 ROBO1Q9Y6N7 1651 aa27.1■■□□□ 1.93
SH3TC1-214ENST00000508183 C19orf44Q9H6X5 657 aa27.08■■□□□ 1.93
SH3TC1-214ENST00000508183 METP08581 1390 aa27.08■■□□□ 1.93
SH3TC1-214ENST00000508183 PIK3C2GO75747 1445 aa27.07■■□□□ 1.92
SH3TC1-214ENST00000508183 ATF3P18847 181 aa27.07■■□□□ 1.92
SH3TC1-214ENST00000508183 CADPS2Q86UW7 1296 aa27.07■■□□□ 1.92
SH3TC1-214ENST00000508183 DCAF11Q8TEB1 546 aa27.07■■□□□ 1.92
SH3TC1-214ENST00000508183 SETD1AO15047 1707 aaKnown RBP27.06■■□□□ 1.92
SH3TC1-214ENST00000508183 L3MBTL2Q969R5 705 aa27.06■■□□□ 1.92
SH3TC1-214ENST00000508183 XRN1Q8IZH2 1706 aaKnown RBP27.05■■□□□ 1.92
SH3TC1-214ENST00000508183 PHF23Q9BUL5 403 aaPredicted RBP27.04■■□□□ 1.92
SH3TC1-214ENST00000508183 KDM2AQ9Y2K7 1162 aa27.03■■□□□ 1.92
SH3TC1-214ENST00000508183 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
SH3TC1-214ENST00000508183 DCCP43146 1447 aa26.99■■□□□ 1.91
SH3TC1-214ENST00000508183 STAC3Q96MF2 364 aa26.99■■□□□ 1.91
SH3TC1-214ENST00000508183 TONSLQ96HA7 1378 aa26.98■■□□□ 1.91
SH3TC1-214ENST00000508183 PRAG1Q86YV5 1406 aa26.97■■□□□ 1.91
SH3TC1-214ENST00000508183 ASXL1Q8IXJ9 1541 aa26.97■■□□□ 1.91
SH3TC1-214ENST00000508183 LAMC1P11047 1609 aa26.94■■□□□ 1.9
SH3TC1-214ENST00000508183 SOCS7O14512 581 aa26.93■■□□□ 1.9
SH3TC1-214ENST00000508183 C14orf93Q9H972 538 aaKnown RBP26.93■■□□□ 1.9
SH3TC1-214ENST00000508183 ADGRL3Q9HAR2 1447 aa26.93■■□□□ 1.9
SH3TC1-214ENST00000508183 PHLPP1O60346 1717 aa26.93■■□□□ 1.9
SH3TC1-214ENST00000508183 PTCH1Q13635 1447 aa26.92■■□□□ 1.9
SH3TC1-214ENST00000508183 CFAP70Q5T0N1 1121 aa26.92■■□□□ 1.9
SH3TC1-214ENST00000508183 ADGRB1O14514 1584 aa26.89■■□□□ 1.9
SH3TC1-214ENST00000508183 JCADQ9P266 1359 aa26.88■■□□□ 1.89
SH3TC1-214ENST00000508183 KIAA1210Q9ULL0 1709 aa26.87■■□□□ 1.89
SH3TC1-214ENST00000508183 BRINP3Q76B58 766 aa26.87■■□□□ 1.89
SH3TC1-214ENST00000508183 ROBO2Q9HCK4 1378 aa26.86■■□□□ 1.89
SH3TC1-214ENST00000508183 TMEM132EQ6IEE7 984 aa26.86■■□□□ 1.89
SH3TC1-214ENST00000508183 MST1RQ04912 1400 aa26.86■■□□□ 1.89
SH3TC1-214ENST00000508183 NBPF8Q3BBV2 869 aa26.85■■□□□ 1.89
SH3TC1-214ENST00000508183 COL16A1Q07092 1604 aaPredicted RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms