RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	CHD2	O14647	1828 aa	Known RBP	20.85	■□□□□ 0.93
CDHR2-204	ENST00000508085	NWD1	Q149M9	1564 aa		20.84	■□□□□ 0.93
CDHR2-204	ENST00000508085	TRPM2	O94759	1503 aa		20.83	■□□□□ 0.93
CDHR2-204	ENST00000508085	KIF1B	O60333	1816 aa		20.83	■□□□□ 0.93
CDHR2-204	ENST00000508085	PLEKHG1	Q9ULL1	1385 aa		20.81	■□□□□ 0.92
CDHR2-204	ENST00000508085	CHGA	P10645	457 aa	Known RBP	20.79	■□□□□ 0.92
CDHR2-204	ENST00000508085	SLC26A8	Q96RN1	970 aa		20.78	■□□□□ 0.92
CDHR2-204	ENST00000508085	NRXN3	Q9Y4C0	1643 aa		20.77	■□□□□ 0.92
CDHR2-204	ENST00000508085	DIP2A	Q14689	1571 aa		20.76	■□□□□ 0.91
CDHR2-204	ENST00000508085	SENP3	Q9H4L4	574 aa	Predicted RBP	20.76	■□□□□ 0.91
CDHR2-204	ENST00000508085	NKTR	P30414	1462 aa	Known RBP	20.75	■□□□□ 0.91
CDHR2-204	ENST00000508085	NUTM2D	Q5VT03	806 aa	Predicted RBP	20.74	■□□□□ 0.91
CDHR2-204	ENST00000508085	ADAMTS13	Q76LX8	1427 aa		20.74	■□□□□ 0.91
CDHR2-204	ENST00000508085	TRIM52	Q96A61	297 aa		20.74	■□□□□ 0.91
CDHR2-204	ENST00000508085	TOM1	O60784	492 aa		20.73	■□□□□ 0.91
CDHR2-204	ENST00000508085	PPP1R15A	O75807	674 aa	Predicted RBP	20.73	■□□□□ 0.91
CDHR2-204	ENST00000508085	NEXMIF	Q5QGS0	1516 aa		20.73	■□□□□ 0.91
CDHR2-204	ENST00000508085	KCNA6	P17658	529 aa		20.72	■□□□□ 0.91
CDHR2-204	ENST00000508085	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	20.72	■□□□□ 0.91
CDHR2-204	ENST00000508085	HDGF	P51858	240 aa	Known RBP	20.71	■□□□□ 0.91
CDHR2-204	ENST00000508085	PIP4K2B	P78356	416 aa		20.71	■□□□□ 0.91
CDHR2-204	ENST00000508085	BCAN	Q96GW7	911 aa		20.7	■□□□□ 0.9
CDHR2-204	ENST00000508085	SETBP1	Q9Y6X0	1596 aa		20.7	■□□□□ 0.9
CDHR2-204	ENST00000508085	TMEM94	Q12767	1356 aa		20.7	■□□□□ 0.9
CDHR2-204	ENST00000508085	SCAF1	Q9H7N4	1312 aa	Known RBP	20.69	■□□□□ 0.9
CDHR2-204	ENST00000508085	PPL	O60437	1756 aa		20.69	■□□□□ 0.9
CDHR2-204	ENST00000508085	SLC4A1AP	Q9BWU0	796 aa	Known RBP	20.68	■□□□□ 0.9
CDHR2-204	ENST00000508085	TBX22	Q9Y458	520 aa		20.67	■□□□□ 0.9
CDHR2-204	ENST00000508085	XRN1	Q8IZH2	1706 aa	Known RBP	20.67	■□□□□ 0.9
CDHR2-204	ENST00000508085	HSPA1L	P34931	641 aa		20.66	■□□□□ 0.9
CDHR2-204	ENST00000508085	SETD1A	O15047	1707 aa	Known RBP	20.66	■□□□□ 0.9
CDHR2-204	ENST00000508085	PROSER2	Q86WR7	435 aa	Predicted RBP	20.65	■□□□□ 0.9
CDHR2-204	ENST00000508085	RBM33	Q96EV2	1170 aa	Known RBP	20.64	■□□□□ 0.89
CDHR2-204	ENST00000508085	PTPRU	Q92729	1446 aa		20.63	■□□□□ 0.89
CDHR2-204	ENST00000508085	SETD5	Q9C0A6	1442 aa		20.63	■□□□□ 0.89
CDHR2-204	ENST00000508085	ZNF326	Q5BKZ1	582 aa	Known RBP	20.63	■□□□□ 0.89
CDHR2-204	ENST00000508085	IFT172	Q9UG01	1749 aa		20.63	■□□□□ 0.89
CDHR2-204	ENST00000508085	PIK3R4	Q99570	1358 aa		20.62	■□□□□ 0.89
CDHR2-204	ENST00000508085	FOXD1	Q16676	465 aa		20.62	■□□□□ 0.89
CDHR2-204	ENST00000508085	ROBO1	Q9Y6N7	1651 aa		20.61	■□□□□ 0.89
CDHR2-204	ENST00000508085	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	20.6	■□□□□ 0.89
CDHR2-204	ENST00000508085	MPHOSPH9	Q99550	1183 aa		20.58	■□□□□ 0.89
CDHR2-204	ENST00000508085	DISP3	Q9P2K9	1392 aa		20.57	■□□□□ 0.88
CDHR2-204	ENST00000508085	MET	P08581	1390 aa		20.56	■□□□□ 0.88
CDHR2-204	ENST00000508085	RAB3GAP2	Q9H2M9	1393 aa		20.56	■□□□□ 0.88
CDHR2-204	ENST00000508085	MED1	Q15648	1581 aa	Predicted RBP	20.55	■□□□□ 0.88
CDHR2-204	ENST00000508085	MSH6	P52701	1360 aa		20.55	■□□□□ 0.88
CDHR2-204	ENST00000508085	CCDC144A	A2RUR9	1427 aa		20.54	■□□□□ 0.88
CDHR2-204	ENST00000508085	FAM135B	Q49AJ0	1406 aa		20.54	■□□□□ 0.88
CDHR2-204	ENST00000508085	NCOA3	Q9Y6Q9	1424 aa		20.54	■□□□□ 0.88
CDHR2-204	ENST00000508085	SPATA31E1	Q6ZUB1	1445 aa		20.53	■□□□□ 0.88
CDHR2-204	ENST00000508085	AMOTL2	Q9Y2J4	779 aa		20.53	■□□□□ 0.88
CDHR2-204	ENST00000508085	NALCN	Q8IZF0	1738 aa		20.53	■□□□□ 0.88
CDHR2-204	ENST00000508085	RPGRIP1L	Q68CZ1	1315 aa		20.51	■□□□□ 0.87
CDHR2-204	ENST00000508085	PHLPP1	O60346	1717 aa		20.5	■□□□□ 0.87
CDHR2-204	ENST00000508085	ACIN1	Q9UKV3	1341 aa	Known RBP	20.49	■□□□□ 0.87
CDHR2-204	ENST00000508085	VGF	O15240	615 aa	Predicted RBP	20.48	■□□□□ 0.87
CDHR2-204	ENST00000508085	ILDR2	Q71H61	639 aa		20.45	■□□□□ 0.86
CDHR2-204	ENST00000508085	SLAIN2	Q9P270	581 aa		20.45	■□□□□ 0.86
CDHR2-204	ENST00000508085	C14orf37	Q86TY3	774 aa		20.44	■□□□□ 0.86
CDHR2-204	ENST00000508085	COL16A1	Q07092	1604 aa	Predicted RBP	20.44	■□□□□ 0.86
CDHR2-204	ENST00000508085	PRAG1	Q86YV5	1406 aa		20.44	■□□□□ 0.86
CDHR2-204	ENST00000508085	C19orf44	Q9H6X5	657 aa		20.43	■□□□□ 0.86
CDHR2-204	ENST00000508085	ADGRF5	Q8IZF2	1346 aa		20.43	■□□□□ 0.86
CDHR2-204	ENST00000508085	DCC	P43146	1447 aa		20.43	■□□□□ 0.86
CDHR2-204	ENST00000508085	PTCH1	Q13635	1447 aa		20.43	■□□□□ 0.86
CDHR2-204	ENST00000508085	RGL3	Q3MIN7	710 aa		20.42	■□□□□ 0.86
CDHR2-204	ENST00000508085	ASXL1	Q8IXJ9	1541 aa		20.42	■□□□□ 0.86
CDHR2-204	ENST00000508085	KNDC1	Q76NI1	1749 aa		20.41	■□□□□ 0.86
CDHR2-204	ENST00000508085	ADGRL3	Q9HAR2	1447 aa		20.41	■□□□□ 0.86
CDHR2-204	ENST00000508085	AHDC1	Q5TGY3	1603 aa	Predicted RBP	20.41	■□□□□ 0.86
CDHR2-204	ENST00000508085	ANKRD30B	Q9BXX2	1392 aa		20.4	■□□□□ 0.86
CDHR2-204	ENST00000508085	PIK3C2G	O75747	1445 aa		20.39	■□□□□ 0.85
CDHR2-204	ENST00000508085	ROBO2	Q9HCK4	1378 aa		20.39	■□□□□ 0.85
CDHR2-204	ENST00000508085	CADPS2	Q86UW7	1296 aa		20.39	■□□□□ 0.85
CDHR2-204	ENST00000508085	NHSL1	Q5SYE7	1610 aa		20.38	■□□□□ 0.85
CDHR2-204	ENST00000508085	MST1R	Q04912	1400 aa		20.38	■□□□□ 0.85
CDHR2-204	ENST00000508085	ATF3	P18847	181 aa		20.38	■□□□□ 0.85
CDHR2-204	ENST00000508085	NRXN1	Q9ULB1	1477 aa		20.37	■□□□□ 0.85
CDHR2-204	ENST00000508085	HRC	P23327	699 aa		20.37	■□□□□ 0.85
CDHR2-204	ENST00000508085	LAMC1	P11047	1609 aa		20.37	■□□□□ 0.85
CDHR2-204	ENST00000508085	MYOM2	P54296	1465 aa		20.37	■□□□□ 0.85
CDHR2-204	ENST00000508085	SHPRH	Q149N8	1683 aa		20.34	■□□□□ 0.85
CDHR2-204	ENST00000508085	TECPR2	O15040	1411 aa		20.32	■□□□□ 0.84
CDHR2-204	ENST00000508085	BRINP3	Q76B58	766 aa		20.31	■□□□□ 0.84
CDHR2-204	ENST00000508085	CDC42BPG	Q6DT37	1551 aa		20.3	■□□□□ 0.84
CDHR2-204	ENST00000508085	LRPPRC	P42704	1394 aa	Known RBP	20.3	■□□□□ 0.84
CDHR2-204	ENST00000508085	YTHDC2	Q9H6S0	1430 aa	Known RBP	20.27	■□□□□ 0.84
CDHR2-204	ENST00000508085	C1orf167	Q5SNV9	1468 aa		20.27	■□□□□ 0.84
CDHR2-204	ENST00000508085	JCAD	Q9P266	1359 aa		20.27	■□□□□ 0.84
CDHR2-204	ENST00000508085	TMEM132E	Q6IEE7	984 aa		20.27	■□□□□ 0.84
CDHR2-204	ENST00000508085	FMN2	Q9NZ56	1722 aa		20.25	■□□□□ 0.83
CDHR2-204	ENST00000508085	ABCC11	Q96J66	1382 aa		20.25	■□□□□ 0.83
CDHR2-204	ENST00000508085	PHF23	Q9BUL5	403 aa	Predicted RBP	20.25	■□□□□ 0.83
CDHR2-204	ENST00000508085	C14orf93	Q9H972	538 aa	Known RBP	20.25	■□□□□ 0.83
CDHR2-204	ENST00000508085	STK26	Q9P289	416 aa		20.25	■□□□□ 0.83
CDHR2-204	ENST00000508085	PLEKHH1	Q9ULM0	1364 aa		20.24	■□□□□ 0.83
CDHR2-204	ENST00000508085	ADGRB1	O14514	1584 aa		20.24	■□□□□ 0.83
CDHR2-204	ENST00000508085	LRP6	O75581	1613 aa		20.24	■□□□□ 0.83
CDHR2-204	ENST00000508085	RGPD8	O14715	1765 aa	Predicted RBP	20.23	■□□□□ 0.83

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms