RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 RIMS2Q9UQ26 1411 aa23.2■■□□□ 1.3
COL1A1-211ENST00000507689 TMEM131LA2VDJ0 1609 aa23.19■■□□□ 1.3
COL1A1-211ENST00000507689 TRPM2O94759 1503 aa23.15■■□□□ 1.3
COL1A1-211ENST00000507689 SLC26A8Q96RN1 970 aa23.15■■□□□ 1.3
COL1A1-211ENST00000507689 MPHOSPH9Q99550 1183 aa23.15■■□□□ 1.3
COL1A1-211ENST00000507689 UBAP1LF5GYI3 381 aa23.14■■□□□ 1.29
COL1A1-211ENST00000507689 PLEKHG1Q9ULL1 1385 aa23.14■■□□□ 1.29
COL1A1-211ENST00000507689 SENP3Q9H4L4 574 aaPredicted RBP23.13■■□□□ 1.29
COL1A1-211ENST00000507689 ZFYVE9O95405 1425 aa23.13■■□□□ 1.29
COL1A1-211ENST00000507689 MYO5BQ9ULV0 1848 aa23.12■■□□□ 1.29
COL1A1-211ENST00000507689 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
COL1A1-211ENST00000507689 RAB3GAP2Q9H2M9 1393 aa23.11■■□□□ 1.29
COL1A1-211ENST00000507689 TOM1O60784 492 aa23.1■■□□□ 1.29
COL1A1-211ENST00000507689 FOXD1Q16676 465 aa23.08■■□□□ 1.29
COL1A1-211ENST00000507689 KCNA6P17658 529 aa23.07■■□□□ 1.28
COL1A1-211ENST00000507689 CLTCL1P53675 1640 aa23.07■■□□□ 1.28
COL1A1-211ENST00000507689 CCDC144AA2RUR9 1427 aa23.07■■□□□ 1.28
COL1A1-211ENST00000507689 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
COL1A1-211ENST00000507689 KIF1BO60333 1816 aa23.06■■□□□ 1.28
COL1A1-211ENST00000507689 TBX22Q9Y458 520 aa23.05■■□□□ 1.28
COL1A1-211ENST00000507689 VGFO15240 615 aaPredicted RBP23.03■■□□□ 1.28
COL1A1-211ENST00000507689 HRCP23327 699 aa23.03■■□□□ 1.28
COL1A1-211ENST00000507689 PROSER2Q86WR7 435 aaPredicted RBP23.03■■□□□ 1.28
COL1A1-211ENST00000507689 RPGRIP1LQ68CZ1 1315 aa23.03■■□□□ 1.28
COL1A1-211ENST00000507689 LRRC7Q96NW7 1537 aa23.02■■□□□ 1.28
COL1A1-211ENST00000507689 PIP4K2BP78356 416 aa23■■□□□ 1.27
COL1A1-211ENST00000507689 DIP2AQ14689 1571 aa23■■□□□ 1.27
COL1A1-211ENST00000507689 PIK3R4Q99570 1358 aa22.98■■□□□ 1.27
COL1A1-211ENST00000507689 STRCP1A6NGW2 1772 aa22.97■■□□□ 1.27
COL1A1-211ENST00000507689 NKTRP30414 1462 aaKnown RBP22.97■■□□□ 1.27
COL1A1-211ENST00000507689 RGL3Q3MIN7 710 aa22.96■■□□□ 1.27
COL1A1-211ENST00000507689 C14orf37Q86TY3 774 aa22.96■■□□□ 1.27
COL1A1-211ENST00000507689 ADAMTS13Q76LX8 1427 aa22.94■■□□□ 1.26
COL1A1-211ENST00000507689 TMEM94Q12767 1356 aa22.94■■□□□ 1.26
COL1A1-211ENST00000507689 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
COL1A1-211ENST00000507689 NWD1Q149M9 1564 aa22.92■■□□□ 1.26
COL1A1-211ENST00000507689 MSH6P52701 1360 aa22.91■■□□□ 1.26
COL1A1-211ENST00000507689 SETBP1Q9Y6X0 1596 aa22.91■■□□□ 1.26
COL1A1-211ENST00000507689 AMOTL2Q9Y2J4 779 aa22.9■■□□□ 1.26
COL1A1-211ENST00000507689 CHD2O14647 1828 aaKnown RBP22.89■■□□□ 1.25
COL1A1-211ENST00000507689 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.25
COL1A1-211ENST00000507689 RBM33Q96EV2 1170 aaKnown RBP22.87■■□□□ 1.25
COL1A1-211ENST00000507689 SPATA31E1Q6ZUB1 1445 aa22.84■■□□□ 1.25
COL1A1-211ENST00000507689 NCOA3Q9Y6Q9 1424 aa22.84■■□□□ 1.25
COL1A1-211ENST00000507689 PPLO60437 1756 aa22.82■■□□□ 1.24
COL1A1-211ENST00000507689 METP08581 1390 aa22.82■■□□□ 1.24
COL1A1-211ENST00000507689 ATF3P18847 181 aa22.82■■□□□ 1.24
COL1A1-211ENST00000507689 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
COL1A1-211ENST00000507689 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
COL1A1-211ENST00000507689 CADPS2Q86UW7 1296 aa22.79■■□□□ 1.24
COL1A1-211ENST00000507689 XIRP1Q702N8 1843 aaKnown RBP22.79■■□□□ 1.24
COL1A1-211ENST00000507689 HSPA1LP34931 641 aa22.78■■□□□ 1.24
COL1A1-211ENST00000507689 PTPRUQ92729 1446 aa22.78■■□□□ 1.24
COL1A1-211ENST00000507689 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
COL1A1-211ENST00000507689 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
COL1A1-211ENST00000507689 ALKQ9UM73 1620 aa22.77■■□□□ 1.24
COL1A1-211ENST00000507689 SLAIN2Q9P270 581 aa22.76■■□□□ 1.23
COL1A1-211ENST00000507689 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
COL1A1-211ENST00000507689 STAC3Q96MF2 364 aa22.73■■□□□ 1.23
COL1A1-211ENST00000507689 FAM135BQ49AJ0 1406 aa22.73■■□□□ 1.23
COL1A1-211ENST00000507689 DCAF11Q8TEB1 546 aa22.71■■□□□ 1.23
COL1A1-211ENST00000507689 KDM2AQ9Y2K7 1162 aa22.71■■□□□ 1.23
COL1A1-211ENST00000507689 IFT172Q9UG01 1749 aa22.71■■□□□ 1.23
COL1A1-211ENST00000507689 MYOM2P54296 1465 aa22.69■■□□□ 1.22
COL1A1-211ENST00000507689 PIK3C2GO75747 1445 aa22.69■■□□□ 1.22
COL1A1-211ENST00000507689 PTCH1Q13635 1447 aa22.69■■□□□ 1.22
COL1A1-211ENST00000507689 STK26Q9P289 416 aa22.69■■□□□ 1.22
COL1A1-211ENST00000507689 DCCP43146 1447 aa22.68■■□□□ 1.22
COL1A1-211ENST00000507689 C14orf93Q9H972 538 aaKnown RBP22.66■■□□□ 1.22
COL1A1-211ENST00000507689 ADGRL3Q9HAR2 1447 aa22.65■■□□□ 1.22
COL1A1-211ENST00000507689 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.65■■□□□ 1.22
COL1A1-211ENST00000507689 DHX57Q6P158 1386 aaKnown RBP22.65■■□□□ 1.22
COL1A1-211ENST00000507689 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
COL1A1-211ENST00000507689 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
COL1A1-211ENST00000507689 DISP3Q9P2K9 1392 aa22.64■■□□□ 1.22
COL1A1-211ENST00000507689 ROBO1Q9Y6N7 1651 aa22.64■■□□□ 1.21
COL1A1-211ENST00000507689 LRPPRCP42704 1394 aaKnown RBP22.63■■□□□ 1.21
COL1A1-211ENST00000507689 ROBO2Q9HCK4 1378 aa22.63■■□□□ 1.21
COL1A1-211ENST00000507689 CFAP70Q5T0N1 1121 aa22.63■■□□□ 1.21
COL1A1-211ENST00000507689 LAMC1P11047 1609 aa22.63■■□□□ 1.21
COL1A1-211ENST00000507689 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
COL1A1-211ENST00000507689 PRAG1Q86YV5 1406 aa22.61■■□□□ 1.21
COL1A1-211ENST00000507689 ABCC11Q96J66 1382 aa22.61■■□□□ 1.21
COL1A1-211ENST00000507689 YTHDC2Q9H6S0 1430 aaKnown RBP22.6■■□□□ 1.21
COL1A1-211ENST00000507689 TECPR2O15040 1411 aa22.57■■□□□ 1.2
COL1A1-211ENST00000507689 POGKQ9P215 609 aa22.56■■□□□ 1.2
COL1A1-211ENST00000507689 NEUROD1Q13562 356 aa22.55■■□□□ 1.2
COL1A1-211ENST00000507689 WAPLQ7Z5K2 1190 aa22.55■■□□□ 1.2
COL1A1-211ENST00000507689 SIRT1Q96EB6 747 aa22.55■■□□□ 1.2
COL1A1-211ENST00000507689 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
COL1A1-211ENST00000507689 NALCNQ8IZF0 1738 aa22.54■■□□□ 1.2
COL1A1-211ENST00000507689 BRINP3Q76B58 766 aa22.54■■□□□ 1.2
COL1A1-211ENST00000507689 MST1RQ04912 1400 aa22.54■■□□□ 1.2
COL1A1-211ENST00000507689 PHLPP1O60346 1717 aa22.53■■□□□ 1.2
COL1A1-211ENST00000507689 KNDC1Q76NI1 1749 aa22.52■■□□□ 1.2
COL1A1-211ENST00000507689 ASXL1Q8IXJ9 1541 aa22.52■■□□□ 1.19
COL1A1-211ENST00000507689 PRAM1Q96QH2 718 aa22.5■■□□□ 1.19
COL1A1-211ENST00000507689 TRAK1Q9UPV9 953 aa22.5■■□□□ 1.19
COL1A1-211ENST00000507689 JCADQ9P266 1359 aa22.5■■□□□ 1.19
COL1A1-211ENST00000507689 C1orf167Q5SNV9 1468 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms