RNA–Protein interactions for RNA: ENST00000507522.1

SDHA-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 644 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-208ENST00000507522 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
SDHA-208ENST00000507522 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
SDHA-208ENST00000507522 LTKP29376 864 aa18.23■□□□□ 0.51
SDHA-208ENST00000507522 TXNDC2Q86VQ3 553 aa18.21■□□□□ 0.51
SDHA-208ENST00000507522 RIMS2Q9UQ26 1411 aa18.21■□□□□ 0.51
SDHA-208ENST00000507522 FOXD1Q16676 465 aa18.19■□□□□ 0.5
SDHA-208ENST00000507522 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
SDHA-208ENST00000507522 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
SDHA-208ENST00000507522 CHGAP10645 457 aaKnown RBP18.17■□□□□ 0.5
SDHA-208ENST00000507522 NEXMIFQ5QGS0 1516 aa18.17■□□□□ 0.5
SDHA-208ENST00000507522 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
SDHA-208ENST00000507522 PLEKHG1Q9ULL1 1385 aa18.15■□□□□ 0.5
SDHA-208ENST00000507522 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
SDHA-208ENST00000507522 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.5
SDHA-208ENST00000507522 PPLO60437 1756 aa18.13■□□□□ 0.49
SDHA-208ENST00000507522 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
SDHA-208ENST00000507522 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.13■□□□□ 0.49
SDHA-208ENST00000507522 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
SDHA-208ENST00000507522 SPATA31E1Q6ZUB1 1445 aa18.12■□□□□ 0.49
SDHA-208ENST00000507522 ANKRD30BQ9BXX2 1392 aa18.11■□□□□ 0.49
SDHA-208ENST00000507522 CPS1P31327 1500 aa18.11■□□□□ 0.49
SDHA-208ENST00000507522 DIP2AQ14689 1571 aa18.11■□□□□ 0.49
SDHA-208ENST00000507522 MED1Q15648 1581 aaPredicted RBP18.11■□□□□ 0.49
SDHA-208ENST00000507522 NRXN3Q9Y4C0 1643 aa18.11■□□□□ 0.49
SDHA-208ENST00000507522 SETBP1Q9Y6X0 1596 aa18.09■□□□□ 0.49
SDHA-208ENST00000507522 ADAMTS13Q76LX8 1427 aa18.09■□□□□ 0.49
SDHA-208ENST00000507522 NWD1Q149M9 1564 aa18.08■□□□□ 0.48
SDHA-208ENST00000507522 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
SDHA-208ENST00000507522 RPGRIP1LQ68CZ1 1315 aa18.07■□□□□ 0.48
SDHA-208ENST00000507522 PPP1R15AO75807 674 aaPredicted RBP18.07■□□□□ 0.48
SDHA-208ENST00000507522 ZNF326Q5BKZ1 582 aaKnown RBP18.07■□□□□ 0.48
SDHA-208ENST00000507522 NUTM2DQ5VT03 806 aaPredicted RBP18.06■□□□□ 0.48
SDHA-208ENST00000507522 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
SDHA-208ENST00000507522 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
SDHA-208ENST00000507522 SETD1AO15047 1707 aaKnown RBP18.04■□□□□ 0.48
SDHA-208ENST00000507522 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
SDHA-208ENST00000507522 XIRP1Q702N8 1843 aaKnown RBP18.03■□□□□ 0.48
SDHA-208ENST00000507522 LRRC7Q96NW7 1537 aa18.02■□□□□ 0.47
SDHA-208ENST00000507522 PIK3R4Q99570 1358 aa18.02■□□□□ 0.47
SDHA-208ENST00000507522 HSPA1LP34931 641 aa18.01■□□□□ 0.47
SDHA-208ENST00000507522 PIP4K2BP78356 416 aa18.01■□□□□ 0.47
SDHA-208ENST00000507522 NKTRP30414 1462 aaKnown RBP18.01■□□□□ 0.47
SDHA-208ENST00000507522 VGFO15240 615 aaPredicted RBP18■□□□□ 0.47
SDHA-208ENST00000507522 KCNA6P17658 529 aa18■□□□□ 0.47
SDHA-208ENST00000507522 ALKQ9UM73 1620 aa18■□□□□ 0.47
SDHA-208ENST00000507522 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
SDHA-208ENST00000507522 BCANQ96GW7 911 aa17.99■□□□□ 0.47
SDHA-208ENST00000507522 MYOM2P54296 1465 aa17.98■□□□□ 0.47
SDHA-208ENST00000507522 NRXN1Q9ULB1 1477 aa17.97■□□□□ 0.47
SDHA-208ENST00000507522 DHX57Q6P158 1386 aaKnown RBP17.97■□□□□ 0.47
SDHA-208ENST00000507522 RGL3Q3MIN7 710 aa17.97■□□□□ 0.47
SDHA-208ENST00000507522 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
SDHA-208ENST00000507522 PTPRUQ92729 1446 aa17.96■□□□□ 0.47
SDHA-208ENST00000507522 TOM1O60784 492 aa17.95■□□□□ 0.46
SDHA-208ENST00000507522 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
SDHA-208ENST00000507522 PIK3C2GO75747 1445 aa17.94■□□□□ 0.46
SDHA-208ENST00000507522 METP08581 1390 aa17.93■□□□□ 0.46
SDHA-208ENST00000507522 LAMC1P11047 1609 aa17.92■□□□□ 0.46
SDHA-208ENST00000507522 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
SDHA-208ENST00000507522 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
SDHA-208ENST00000507522 ASXL1Q8IXJ9 1541 aa17.9■□□□□ 0.46
SDHA-208ENST00000507522 NCOA3Q9Y6Q9 1424 aa17.89■□□□□ 0.45
SDHA-208ENST00000507522 PROSER2Q86WR7 435 aaPredicted RBP17.88■□□□□ 0.45
SDHA-208ENST00000507522 AMOTL2Q9Y2J4 779 aa17.88■□□□□ 0.45
SDHA-208ENST00000507522 KNDC1Q76NI1 1749 aa17.87■□□□□ 0.45
SDHA-208ENST00000507522 STAC3Q96MF2 364 aa17.87■□□□□ 0.45
SDHA-208ENST00000507522 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
SDHA-208ENST00000507522 PTCH1Q13635 1447 aa17.86■□□□□ 0.45
SDHA-208ENST00000507522 PCGF6Q9BYE7 350 aa17.84■□□□□ 0.45
SDHA-208ENST00000507522 C14orf93Q9H972 538 aaKnown RBP17.84■□□□□ 0.45
SDHA-208ENST00000507522 TECPR2O15040 1411 aa17.83■□□□□ 0.45
SDHA-208ENST00000507522 DCAF11Q8TEB1 546 aa17.83■□□□□ 0.44
SDHA-208ENST00000507522 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.83■□□□□ 0.44
SDHA-208ENST00000507522 KIAA1210Q9ULL0 1709 aa17.82■□□□□ 0.44
SDHA-208ENST00000507522 SIN3AQ96ST3 1273 aa17.82■□□□□ 0.44
SDHA-208ENST00000507522 ADGRB1O14514 1584 aa17.82■□□□□ 0.44
SDHA-208ENST00000507522 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
SDHA-208ENST00000507522 LRPPRCP42704 1394 aaKnown RBP17.81■□□□□ 0.44
SDHA-208ENST00000507522 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
SDHA-208ENST00000507522 CFAP70Q5T0N1 1121 aa17.8■□□□□ 0.44
SDHA-208ENST00000507522 MSH6P52701 1360 aa17.79■□□□□ 0.44
SDHA-208ENST00000507522 ROBO2Q9HCK4 1378 aa17.79■□□□□ 0.44
SDHA-208ENST00000507522 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
SDHA-208ENST00000507522 YTHDC2Q9H6S0 1430 aaKnown RBP17.79■□□□□ 0.44
SDHA-208ENST00000507522 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
SDHA-208ENST00000507522 DCCP43146 1447 aa17.78■□□□□ 0.44
SDHA-208ENST00000507522 ADGRL3Q9HAR2 1447 aa17.78■□□□□ 0.44
SDHA-208ENST00000507522 TMEM132EQ6IEE7 984 aa17.77■□□□□ 0.44
SDHA-208ENST00000507522 DLC1Q96QB1 1528 aa17.76■□□□□ 0.43
SDHA-208ENST00000507522 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
SDHA-208ENST00000507522 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
SDHA-208ENST00000507522 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
SDHA-208ENST00000507522 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
SDHA-208ENST00000507522 SIRT1Q96EB6 747 aa17.73■□□□□ 0.43
SDHA-208ENST00000507522 ROBO1Q9Y6N7 1651 aa17.73■□□□□ 0.43
SDHA-208ENST00000507522 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
SDHA-208ENST00000507522 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.43
SDHA-208ENST00000507522 C14orf37Q86TY3 774 aa17.71■□□□□ 0.43
SDHA-208ENST00000507522 STK26Q9P289 416 aa17.71■□□□□ 0.43
SDHA-208ENST00000507522 ARHGEF28Q8N1W1 1705 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms