RNA–Protein interactions for RNA: ENST00000507079.5

NFKB1-206, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-206ENST00000507079 CPS1P31327 1500 aa29.04■■■□□ 2.24
NFKB1-206ENST00000507079 STRCP1A6NGW2 1772 aa29.03■■■□□ 2.24
NFKB1-206ENST00000507079 HDGFP51858 240 aaKnown RBP29.02■■■□□ 2.24
NFKB1-206ENST00000507079 IQSEC2Q5JU85 1478 aa29.02■■■□□ 2.24
NFKB1-206ENST00000507079 FOXD1Q16676 465 aa29.01■■■□□ 2.23
NFKB1-206ENST00000507079 PPP1R15AO75807 674 aaPredicted RBP29■■■□□ 2.23
NFKB1-206ENST00000507079 FBXO41Q8TF61 875 aa29■■■□□ 2.23
NFKB1-206ENST00000507079 PLEKHG1Q9ULL1 1385 aa28.99■■■□□ 2.23
NFKB1-206ENST00000507079 ILDR1Q86SU0 546 aaPredicted RBP28.98■■■□□ 2.23
NFKB1-206ENST00000507079 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.98■■■□□ 2.23
NFKB1-206ENST00000507079 ZNF326Q5BKZ1 582 aaKnown RBP28.94■■■□□ 2.22
NFKB1-206ENST00000507079 BCANQ96GW7 911 aa28.94■■■□□ 2.22
NFKB1-206ENST00000507079 NEXMIFQ5QGS0 1516 aa28.94■■■□□ 2.22
NFKB1-206ENST00000507079 CCDC144AA2RUR9 1427 aa28.94■■■□□ 2.22
NFKB1-206ENST00000507079 HRCP23327 699 aa28.93■■■□□ 2.22
NFKB1-206ENST00000507079 NUTM2DQ5VT03 806 aaPredicted RBP28.93■■■□□ 2.22
NFKB1-206ENST00000507079 SLC26A8Q96RN1 970 aa28.91■■■□□ 2.22
NFKB1-206ENST00000507079 DIP2AQ14689 1571 aa28.91■■■□□ 2.22
NFKB1-206ENST00000507079 SENP3Q9H4L4 574 aaPredicted RBP28.9■■■□□ 2.22
NFKB1-206ENST00000507079 PPLO60437 1756 aa28.89■■■□□ 2.22
NFKB1-206ENST00000507079 CHD2O14647 1828 aaKnown RBP28.87■■■□□ 2.21
NFKB1-206ENST00000507079 NWD1Q149M9 1564 aa28.87■■■□□ 2.21
NFKB1-206ENST00000507079 NRXN3Q9Y4C0 1643 aa28.87■■■□□ 2.21
NFKB1-206ENST00000507079 SETBP1Q9Y6X0 1596 aa28.86■■■□□ 2.21
NFKB1-206ENST00000507079 LRRC7Q96NW7 1537 aa28.85■■■□□ 2.21
NFKB1-206ENST00000507079 ADAMTS13Q76LX8 1427 aa28.85■■■□□ 2.21
NFKB1-206ENST00000507079 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
NFKB1-206ENST00000507079 IFT172Q9UG01 1749 aa28.82■■■□□ 2.2
NFKB1-206ENST00000507079 TRIM26Q12899 539 aaPredicted RBP28.81■■■□□ 2.2
NFKB1-206ENST00000507079 SPATA31E1Q6ZUB1 1445 aa28.8■■■□□ 2.2
NFKB1-206ENST00000507079 TBX22Q9Y458 520 aa28.8■■■□□ 2.2
NFKB1-206ENST00000507079 NKTRP30414 1462 aaKnown RBP28.79■■■□□ 2.2
NFKB1-206ENST00000507079 RPGRIP1LQ68CZ1 1315 aa28.79■■■□□ 2.2
NFKB1-206ENST00000507079 KCNA6P17658 529 aa28.79■■■□□ 2.2
NFKB1-206ENST00000507079 PIK3R4Q99570 1358 aa28.75■■■□□ 2.19
NFKB1-206ENST00000507079 ANKRD30BQ9BXX2 1392 aa28.75■■■□□ 2.19
NFKB1-206ENST00000507079 VGFO15240 615 aaPredicted RBP28.74■■■□□ 2.19
NFKB1-206ENST00000507079 UBAP1LF5GYI3 381 aa28.73■■■□□ 2.19
NFKB1-206ENST00000507079 SETD1AO15047 1707 aaKnown RBP28.72■■■□□ 2.19
NFKB1-206ENST00000507079 RGL3Q3MIN7 710 aa28.71■■■□□ 2.19
NFKB1-206ENST00000507079 XRN1Q8IZH2 1706 aaKnown RBP28.7■■■□□ 2.19
NFKB1-206ENST00000507079 TMEM94Q12767 1356 aa28.68■■■□□ 2.18
NFKB1-206ENST00000507079 PROSER2Q86WR7 435 aaPredicted RBP28.68■■■□□ 2.18
NFKB1-206ENST00000507079 ALKQ9UM73 1620 aa28.66■■■□□ 2.18
NFKB1-206ENST00000507079 PTPRUQ92729 1446 aa28.66■■■□□ 2.18
NFKB1-206ENST00000507079 TOM1O60784 492 aa28.65■■■□□ 2.18
NFKB1-206ENST00000507079 METP08581 1390 aa28.63■■■□□ 2.17
NFKB1-206ENST00000507079 AMOTL2Q9Y2J4 779 aa28.61■■■□□ 2.17
NFKB1-206ENST00000507079 ADGRF5Q8IZF2 1346 aa28.61■■■□□ 2.17
NFKB1-206ENST00000507079 RBM33Q96EV2 1170 aaKnown RBP28.6■■■□□ 2.17
NFKB1-206ENST00000507079 MYOM2P54296 1465 aa28.59■■■□□ 2.17
NFKB1-206ENST00000507079 SCAF1Q9H7N4 1312 aaKnown RBP28.57■■■□□ 2.16
NFKB1-206ENST00000507079 PIK3C2GO75747 1445 aa28.57■■■□□ 2.16
NFKB1-206ENST00000507079 PIP4K2BP78356 416 aa28.56■■■□□ 2.16
NFKB1-206ENST00000507079 NCOA3Q9Y6Q9 1424 aa28.56■■■□□ 2.16
NFKB1-206ENST00000507079 LAMC1P11047 1609 aa28.55■■■□□ 2.16
NFKB1-206ENST00000507079 MSH6P52701 1360 aa28.55■■■□□ 2.16
NFKB1-206ENST00000507079 NRXN1Q9ULB1 1477 aa28.54■■■□□ 2.16
NFKB1-206ENST00000507079 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.52■■■□□ 2.16
NFKB1-206ENST00000507079 C14orf37Q86TY3 774 aa28.5■■■□□ 2.15
NFKB1-206ENST00000507079 PTCH1Q13635 1447 aa28.49■■■□□ 2.15
NFKB1-206ENST00000507079 PRAG1Q86YV5 1406 aa28.49■■■□□ 2.15
NFKB1-206ENST00000507079 ASXL1Q8IXJ9 1541 aa28.48■■■□□ 2.15
NFKB1-206ENST00000507079 KNDC1Q76NI1 1749 aa28.48■■■□□ 2.15
NFKB1-206ENST00000507079 NALCNQ8IZF0 1738 aa28.47■■■□□ 2.15
NFKB1-206ENST00000507079 DHX57Q6P158 1386 aaKnown RBP28.45■■■□□ 2.14
NFKB1-206ENST00000507079 ROBO1Q9Y6N7 1651 aa28.44■■■□□ 2.14
NFKB1-206ENST00000507079 DCAF11Q8TEB1 546 aa28.43■■■□□ 2.14
NFKB1-206ENST00000507079 ROBO2Q9HCK4 1378 aa28.41■■■□□ 2.14
NFKB1-206ENST00000507079 C19orf44Q9H6X5 657 aa28.41■■■□□ 2.14
NFKB1-206ENST00000507079 ADGRL3Q9HAR2 1447 aa28.41■■■□□ 2.14
NFKB1-206ENST00000507079 STAC3Q96MF2 364 aa28.4■■■□□ 2.14
NFKB1-206ENST00000507079 C14orf93Q9H972 538 aaKnown RBP28.4■■■□□ 2.14
NFKB1-206ENST00000507079 KDM2AQ9Y2K7 1162 aa28.4■■■□□ 2.14
NFKB1-206ENST00000507079 DCCP43146 1447 aa28.4■■■□□ 2.14
NFKB1-206ENST00000507079 LRPPRCP42704 1394 aaKnown RBP28.39■■■□□ 2.14
NFKB1-206ENST00000507079 TECPR2O15040 1411 aa28.39■■■□□ 2.14
NFKB1-206ENST00000507079 PCGF6Q9BYE7 350 aa28.39■■■□□ 2.14
NFKB1-206ENST00000507079 FAM135BQ49AJ0 1406 aa28.38■■■□□ 2.13
NFKB1-206ENST00000507079 TMEM132EQ6IEE7 984 aa28.38■■■□□ 2.13
NFKB1-206ENST00000507079 YTHDC2Q9H6S0 1430 aaKnown RBP28.37■■■□□ 2.13
NFKB1-206ENST00000507079 ATF3P18847 181 aa28.37■■■□□ 2.13
NFKB1-206ENST00000507079 HSPA1LP34931 641 aa28.37■■■□□ 2.13
NFKB1-206ENST00000507079 CFAP70Q5T0N1 1121 aa28.37■■■□□ 2.13
NFKB1-206ENST00000507079 CADPS2Q86UW7 1296 aa28.37■■■□□ 2.13
NFKB1-206ENST00000507079 SLAIN2Q9P270 581 aa28.35■■■□□ 2.13
NFKB1-206ENST00000507079 STK26Q9P289 416 aa28.35■■■□□ 2.13
NFKB1-206ENST00000507079 ABCC11Q96J66 1382 aa28.34■■■□□ 2.13
NFKB1-206ENST00000507079 ADGRB1O14514 1584 aa28.33■■■□□ 2.13
NFKB1-206ENST00000507079 KIAA1210Q9ULL0 1709 aa28.32■■■□□ 2.12
NFKB1-206ENST00000507079 SIN3AQ96ST3 1273 aa28.31■■■□□ 2.12
NFKB1-206ENST00000507079 CDC42BPGQ6DT37 1551 aa28.28■■■□□ 2.12
NFKB1-206ENST00000507079 MST1RQ04912 1400 aa28.27■■■□□ 2.12
NFKB1-206ENST00000507079 PHLPP1O60346 1717 aa28.27■■■□□ 2.12
NFKB1-206ENST00000507079 NEUROD1Q13562 356 aa28.26■■■□□ 2.11
NFKB1-206ENST00000507079 DLC1Q96QB1 1528 aa28.26■■■□□ 2.11
NFKB1-206ENST00000507079 PLEKHH1Q9ULM0 1364 aa28.24■■■□□ 2.11
NFKB1-206ENST00000507079 WAPLQ7Z5K2 1190 aa28.23■■■□□ 2.11
NFKB1-206ENST00000507079 SIRT1Q96EB6 747 aa28.22■■■□□ 2.11
NFKB1-206ENST00000507079 L3MBTL2Q969R5 705 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms