RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 PPP1R15AO75807 674 aaPredicted RBP29.36■■■□□ 2.29
DDR1-259ENST00000507046 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.36■■■□□ 2.29
DDR1-259ENST00000507046 ZNF335Q9H4Z2 1342 aaPredicted RBP29.36■■■□□ 2.29
DDR1-259ENST00000507046 CCDC144AA2RUR9 1427 aa29.36■■■□□ 2.29
DDR1-259ENST00000507046 LTBP4Q8N2S1 1624 aa29.35■■■□□ 2.29
DDR1-259ENST00000507046 ZNF326Q5BKZ1 582 aaKnown RBP29.33■■■□□ 2.29
DDR1-259ENST00000507046 TRIM26Q12899 539 aaPredicted RBP29.32■■■□□ 2.28
DDR1-259ENST00000507046 PLEKHG1Q9ULL1 1385 aa29.31■■■□□ 2.28
DDR1-259ENST00000507046 CERKQ8TCT0 537 aa29.3■■■□□ 2.28
DDR1-259ENST00000507046 BCANQ96GW7 911 aa29.28■■■□□ 2.28
DDR1-259ENST00000507046 CPS1P31327 1500 aa29.26■■■□□ 2.27
DDR1-259ENST00000507046 NUTM2DQ5VT03 806 aaPredicted RBP29.25■■■□□ 2.27
DDR1-259ENST00000507046 NEXMIFQ5QGS0 1516 aa29.25■■■□□ 2.27
DDR1-259ENST00000507046 IQSEC2Q5JU85 1478 aa29.22■■■□□ 2.27
DDR1-259ENST00000507046 SLC26A8Q96RN1 970 aa29.2■■■□□ 2.26
DDR1-259ENST00000507046 DIP2AQ14689 1571 aa29.2■■■□□ 2.26
DDR1-259ENST00000507046 SENP3Q9H4L4 574 aaPredicted RBP29.19■■■□□ 2.26
DDR1-259ENST00000507046 RPGRIP1LQ68CZ1 1315 aa29.19■■■□□ 2.26
DDR1-259ENST00000507046 ANKRD30BQ9BXX2 1392 aa29.17■■■□□ 2.26
DDR1-259ENST00000507046 SPATA31E1Q6ZUB1 1445 aa29.17■■■□□ 2.26
DDR1-259ENST00000507046 STRCP1A6NGW2 1772 aa29.16■■■□□ 2.26
DDR1-259ENST00000507046 SETBP1Q9Y6X0 1596 aa29.15■■■□□ 2.26
DDR1-259ENST00000507046 PPLO60437 1756 aa29.14■■■□□ 2.26
DDR1-259ENST00000507046 ADAMTS13Q76LX8 1427 aa29.14■■■□□ 2.26
DDR1-259ENST00000507046 VGFO15240 615 aaPredicted RBP29.13■■■□□ 2.25
DDR1-259ENST00000507046 FBXO41Q8TF61 875 aa29.12■■■□□ 2.25
DDR1-259ENST00000507046 TBX22Q9Y458 520 aa29.12■■■□□ 2.25
DDR1-259ENST00000507046 NWD1Q149M9 1564 aa29.11■■■□□ 2.25
DDR1-259ENST00000507046 RGL3Q3MIN7 710 aa29.11■■■□□ 2.25
DDR1-259ENST00000507046 NRXN3Q9Y4C0 1643 aa29.11■■■□□ 2.25
DDR1-259ENST00000507046 KCNA6P17658 529 aa29.09■■■□□ 2.25
DDR1-259ENST00000507046 LRRC7Q96NW7 1537 aa29.08■■■□□ 2.25
DDR1-259ENST00000507046 IFT172Q9UG01 1749 aa29.08■■■□□ 2.25
DDR1-259ENST00000507046 NKTRP30414 1462 aaKnown RBP29.07■■■□□ 2.24
DDR1-259ENST00000507046 PIK3R4Q99570 1358 aa29.07■■■□□ 2.24
DDR1-259ENST00000507046 CHD2O14647 1828 aaKnown RBP29.05■■■□□ 2.24
DDR1-259ENST00000507046 ILDR1Q86SU0 546 aaPredicted RBP29.03■■■□□ 2.24
DDR1-259ENST00000507046 MYOM2P54296 1465 aa28.97■■■□□ 2.23
DDR1-259ENST00000507046 ALKQ9UM73 1620 aa28.97■■■□□ 2.23
DDR1-259ENST00000507046 ADGRF5Q8IZF2 1346 aa28.96■■■□□ 2.23
DDR1-259ENST00000507046 PROSER2Q86WR7 435 aaPredicted RBP28.96■■■□□ 2.23
DDR1-259ENST00000507046 TMEM94Q12767 1356 aa28.96■■■□□ 2.23
DDR1-259ENST00000507046 SETD1AO15047 1707 aaKnown RBP28.95■■■□□ 2.23
DDR1-259ENST00000507046 UBAP1LF5GYI3 381 aa28.95■■■□□ 2.22
DDR1-259ENST00000507046 METP08581 1390 aa28.95■■■□□ 2.22
DDR1-259ENST00000507046 PTPRUQ92729 1446 aa28.94■■■□□ 2.22
DDR1-259ENST00000507046 DHX57Q6P158 1386 aaKnown RBP28.94■■■□□ 2.22
DDR1-259ENST00000507046 XIRP1Q702N8 1843 aaKnown RBP28.94■■■□□ 2.22
DDR1-259ENST00000507046 XRN1Q8IZH2 1706 aaKnown RBP28.94■■■□□ 2.22
DDR1-259ENST00000507046 PIK3C2GO75747 1445 aa28.94■■■□□ 2.22
DDR1-259ENST00000507046 AMOTL2Q9Y2J4 779 aa28.93■■■□□ 2.22
DDR1-259ENST00000507046 NRXN1Q9ULB1 1477 aa28.91■■■□□ 2.22
DDR1-259ENST00000507046 TOM1O60784 492 aa28.9■■■□□ 2.22
DDR1-259ENST00000507046 LAMC1P11047 1609 aa28.87■■■□□ 2.21
DDR1-259ENST00000507046 NCOA3Q9Y6Q9 1424 aa28.86■■■□□ 2.21
DDR1-259ENST00000507046 STAC3Q96MF2 364 aa28.86■■■□□ 2.21
DDR1-259ENST00000507046 DCAF11Q8TEB1 546 aa28.85■■■□□ 2.21
DDR1-259ENST00000507046 RBM33Q96EV2 1170 aaKnown RBP28.85■■■□□ 2.21
DDR1-259ENST00000507046 PCGF6Q9BYE7 350 aa28.85■■■□□ 2.21
DDR1-259ENST00000507046 MSH6P52701 1360 aa28.84■■■□□ 2.21
DDR1-259ENST00000507046 C14orf37Q86TY3 774 aa28.82■■■□□ 2.2
DDR1-259ENST00000507046 PTCH1Q13635 1447 aa28.82■■■□□ 2.2
DDR1-259ENST00000507046 PRAG1Q86YV5 1406 aa28.81■■■□□ 2.2
DDR1-259ENST00000507046 KDM2AQ9Y2K7 1162 aa28.81■■■□□ 2.2
DDR1-259ENST00000507046 SCAF1Q9H7N4 1312 aaKnown RBP28.8■■■□□ 2.2
DDR1-259ENST00000507046 C14orf93Q9H972 538 aaKnown RBP28.79■■■□□ 2.2
DDR1-259ENST00000507046 ASXL1Q8IXJ9 1541 aa28.79■■■□□ 2.2
DDR1-259ENST00000507046 PIP4K2BP78356 416 aa28.78■■■□□ 2.2
DDR1-259ENST00000507046 SIN3AQ96ST3 1273 aa28.76■■■□□ 2.19
DDR1-259ENST00000507046 CFAP70Q5T0N1 1121 aa28.75■■■□□ 2.19
DDR1-259ENST00000507046 LRPPRCP42704 1394 aaKnown RBP28.75■■■□□ 2.19
DDR1-259ENST00000507046 NEUROD1Q13562 356 aa28.74■■■□□ 2.19
DDR1-259ENST00000507046 KNDC1Q76NI1 1749 aa28.74■■■□□ 2.19
DDR1-259ENST00000507046 TMEM132EQ6IEE7 984 aa28.73■■■□□ 2.19
DDR1-259ENST00000507046 ROBO2Q9HCK4 1378 aa28.73■■■□□ 2.19
DDR1-259ENST00000507046 TECPR2O15040 1411 aa28.72■■■□□ 2.19
DDR1-259ENST00000507046 YTHDC2Q9H6S0 1430 aaKnown RBP28.72■■■□□ 2.19
DDR1-259ENST00000507046 C19orf44Q9H6X5 657 aa28.72■■■□□ 2.19
DDR1-259ENST00000507046 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.72■■■□□ 2.19
DDR1-259ENST00000507046 DCCP43146 1447 aa28.7■■■□□ 2.19
DDR1-259ENST00000507046 ADGRL3Q9HAR2 1447 aa28.7■■■□□ 2.19
DDR1-259ENST00000507046 STK26Q9P289 416 aa28.7■■■□□ 2.18
DDR1-259ENST00000507046 ABCC11Q96J66 1382 aa28.7■■■□□ 2.18
DDR1-259ENST00000507046 NALCNQ8IZF0 1738 aa28.69■■■□□ 2.18
DDR1-259ENST00000507046 ATF3P18847 181 aa28.68■■■□□ 2.18
DDR1-259ENST00000507046 CADPS2Q86UW7 1296 aa28.68■■■□□ 2.18
DDR1-259ENST00000507046 ADGRB1O14514 1584 aa28.67■■■□□ 2.18
DDR1-259ENST00000507046 L3MBTL2Q969R5 705 aa28.65■■■□□ 2.18
DDR1-259ENST00000507046 KIAA1210Q9ULL0 1709 aa28.63■■■□□ 2.17
DDR1-259ENST00000507046 FAM135BQ49AJ0 1406 aa28.62■■■□□ 2.17
DDR1-259ENST00000507046 SLAIN2Q9P270 581 aa28.61■■■□□ 2.17
DDR1-259ENST00000507046 ROBO1Q9Y6N7 1651 aa28.61■■■□□ 2.17
DDR1-259ENST00000507046 DLC1Q96QB1 1528 aa28.6■■■□□ 2.17
DDR1-259ENST00000507046 TONSLQ96HA7 1378 aa28.6■■■□□ 2.17
DDR1-259ENST00000507046 SIRT1Q96EB6 747 aa28.59■■■□□ 2.17
DDR1-259ENST00000507046 HSPA1LP34931 641 aa28.56■■■□□ 2.16
DDR1-259ENST00000507046 WAPLQ7Z5K2 1190 aa28.56■■■□□ 2.16
DDR1-259ENST00000507046 PLEKHH1Q9ULM0 1364 aa28.56■■■□□ 2.16
DDR1-259ENST00000507046 CDC42BPGQ6DT37 1551 aa28.55■■■□□ 2.16
DDR1-259ENST00000507046 MST1RQ04912 1400 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms