RNA–Protein interactions for RNA: ENST00000506958.5

APBB3-213, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-213ENST00000506958 RIMS2Q9UQ26 1411 aa31.97■■■□□ 2.71
APBB3-213ENST00000506958 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.96■■■□□ 2.71
APBB3-213ENST00000506958 PPP1R15AO75807 674 aaPredicted RBP31.93■■■□□ 2.7
APBB3-213ENST00000506958 CLTCL1P53675 1640 aa31.93■■■□□ 2.7
APBB3-213ENST00000506958 RAB3GAP2Q9H2M9 1393 aa31.92■■■□□ 2.7
APBB3-213ENST00000506958 PLEKHG1Q9ULL1 1385 aa31.9■■■□□ 2.7
APBB3-213ENST00000506958 KIF1BO60333 1816 aa31.89■■■□□ 2.7
APBB3-213ENST00000506958 MPHOSPH9Q99550 1183 aa31.89■■■□□ 2.7
APBB3-213ENST00000506958 BCANQ96GW7 911 aa31.86■■■□□ 2.69
APBB3-213ENST00000506958 ZNF326Q5BKZ1 582 aaKnown RBP31.83■■■□□ 2.69
APBB3-213ENST00000506958 HRCP23327 699 aa31.82■■■□□ 2.68
APBB3-213ENST00000506958 CCDC144AA2RUR9 1427 aa31.79■■■□□ 2.68
APBB3-213ENST00000506958 STRCP1A6NGW2 1772 aa31.79■■■□□ 2.68
APBB3-213ENST00000506958 DIP2AQ14689 1571 aa31.78■■■□□ 2.68
APBB3-213ENST00000506958 SLC26A8Q96RN1 970 aa31.78■■■□□ 2.68
APBB3-213ENST00000506958 FOXD1Q16676 465 aa31.76■■■□□ 2.67
APBB3-213ENST00000506958 KCNA6P17658 529 aa31.73■■■□□ 2.67
APBB3-213ENST00000506958 NUTM2DQ5VT03 806 aaPredicted RBP31.73■■■□□ 2.67
APBB3-213ENST00000506958 NEXMIFQ5QGS0 1516 aa31.73■■■□□ 2.67
APBB3-213ENST00000506958 LRRC7Q96NW7 1537 aa31.73■■■□□ 2.67
APBB3-213ENST00000506958 TBX22Q9Y458 520 aa31.72■■■□□ 2.67
APBB3-213ENST00000506958 NWD1Q149M9 1564 aa31.71■■■□□ 2.67
APBB3-213ENST00000506958 RPGRIP1LQ68CZ1 1315 aa31.71■■■□□ 2.67
APBB3-213ENST00000506958 NKTRP30414 1462 aaKnown RBP31.7■■■□□ 2.66
APBB3-213ENST00000506958 SETBP1Q9Y6X0 1596 aa31.68■■■□□ 2.66
APBB3-213ENST00000506958 ADAMTS13Q76LX8 1427 aa31.68■■■□□ 2.66
APBB3-213ENST00000506958 UBAP1LF5GYI3 381 aa31.68■■■□□ 2.66
APBB3-213ENST00000506958 PIK3R4Q99570 1358 aa31.68■■■□□ 2.66
APBB3-213ENST00000506958 SENP3Q9H4L4 574 aaPredicted RBP31.66■■■□□ 2.66
APBB3-213ENST00000506958 VGFO15240 615 aaPredicted RBP31.65■■■□□ 2.66
APBB3-213ENST00000506958 CHD2O14647 1828 aaKnown RBP31.65■■■□□ 2.66
APBB3-213ENST00000506958 TOM1O60784 492 aa31.64■■■□□ 2.66
APBB3-213ENST00000506958 PPLO60437 1756 aa31.61■■■□□ 2.65
APBB3-213ENST00000506958 NRXN3Q9Y4C0 1643 aa31.61■■■□□ 2.65
APBB3-213ENST00000506958 SPATA31E1Q6ZUB1 1445 aa31.6■■■□□ 2.65
APBB3-213ENST00000506958 PROSER2Q86WR7 435 aaPredicted RBP31.58■■■□□ 2.65
APBB3-213ENST00000506958 TMEM94Q12767 1356 aa31.56■■■□□ 2.64
APBB3-213ENST00000506958 XIRP1Q702N8 1843 aaKnown RBP31.56■■■□□ 2.64
APBB3-213ENST00000506958 ANKRD30BQ9BXX2 1392 aa31.56■■■□□ 2.64
APBB3-213ENST00000506958 RGL3Q3MIN7 710 aa31.52■■■□□ 2.64
APBB3-213ENST00000506958 IFT172Q9UG01 1749 aa31.51■■■□□ 2.63
APBB3-213ENST00000506958 NCOA3Q9Y6Q9 1424 aa31.49■■■□□ 2.63
APBB3-213ENST00000506958 SCAF1Q9H7N4 1312 aaKnown RBP31.48■■■□□ 2.63
APBB3-213ENST00000506958 XRN1Q8IZH2 1706 aaKnown RBP31.47■■■□□ 2.63
APBB3-213ENST00000506958 AMOTL2Q9Y2J4 779 aa31.47■■■□□ 2.63
APBB3-213ENST00000506958 MSH6P52701 1360 aa31.46■■■□□ 2.63
APBB3-213ENST00000506958 METP08581 1390 aa31.45■■■□□ 2.63
APBB3-213ENST00000506958 PTPRUQ92729 1446 aa31.45■■■□□ 2.63
APBB3-213ENST00000506958 ALKQ9UM73 1620 aa31.45■■■□□ 2.62
APBB3-213ENST00000506958 PIP4K2BP78356 416 aa31.44■■■□□ 2.62
APBB3-213ENST00000506958 SETD1AO15047 1707 aaKnown RBP31.43■■■□□ 2.62
APBB3-213ENST00000506958 TRIM26Q12899 539 aaPredicted RBP31.42■■■□□ 2.62
APBB3-213ENST00000506958 ADGRF5Q8IZF2 1346 aa31.4■■■□□ 2.62
APBB3-213ENST00000506958 MYOM2P54296 1465 aa31.4■■■□□ 2.62
APBB3-213ENST00000506958 C14orf37Q86TY3 774 aa31.39■■■□□ 2.62
APBB3-213ENST00000506958 RBM33Q96EV2 1170 aaKnown RBP31.39■■■□□ 2.62
APBB3-213ENST00000506958 PIK3C2GO75747 1445 aa31.37■■■□□ 2.61
APBB3-213ENST00000506958 PTCH1Q13635 1447 aa31.34■■■□□ 2.61
APBB3-213ENST00000506958 PRAG1Q86YV5 1406 aa31.33■■■□□ 2.61
APBB3-213ENST00000506958 NRXN1Q9ULB1 1477 aa31.33■■■□□ 2.61
APBB3-213ENST00000506958 LAMC1P11047 1609 aa31.32■■■□□ 2.6
APBB3-213ENST00000506958 STAC3Q96MF2 364 aa31.32■■■□□ 2.6
APBB3-213ENST00000506958 C19orf44Q9H6X5 657 aa31.31■■■□□ 2.6
APBB3-213ENST00000506958 DCCP43146 1447 aa31.29■■■□□ 2.6
APBB3-213ENST00000506958 FAM135BQ49AJ0 1406 aa31.29■■■□□ 2.6
APBB3-213ENST00000506958 CADPS2Q86UW7 1296 aa31.28■■■□□ 2.6
APBB3-213ENST00000506958 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.28■■■□□ 2.6
APBB3-213ENST00000506958 ATF3P18847 181 aa31.27■■■□□ 2.6
APBB3-213ENST00000506958 HSPA1LP34931 641 aa31.25■■■□□ 2.59
APBB3-213ENST00000506958 ADGRL3Q9HAR2 1447 aa31.24■■■□□ 2.59
APBB3-213ENST00000506958 SLAIN2Q9P270 581 aa31.23■■■□□ 2.59
APBB3-213ENST00000506958 LRPPRCP42704 1394 aaKnown RBP31.22■■■□□ 2.59
APBB3-213ENST00000506958 DCAF11Q8TEB1 546 aa31.22■■■□□ 2.59
APBB3-213ENST00000506958 C14orf93Q9H972 538 aaKnown RBP31.22■■■□□ 2.59
APBB3-213ENST00000506958 ROBO1Q9Y6N7 1651 aa31.22■■■□□ 2.59
APBB3-213ENST00000506958 ROBO2Q9HCK4 1378 aa31.21■■■□□ 2.59
APBB3-213ENST00000506958 TECPR2O15040 1411 aa31.21■■■□□ 2.59
APBB3-213ENST00000506958 KNDC1Q76NI1 1749 aa31.21■■■□□ 2.59
APBB3-213ENST00000506958 ASXL1Q8IXJ9 1541 aa31.19■■■□□ 2.58
APBB3-213ENST00000506958 NALCNQ8IZF0 1738 aa31.18■■■□□ 2.58
APBB3-213ENST00000506958 ABCC11Q96J66 1382 aa31.17■■■□□ 2.58
APBB3-213ENST00000506958 KDM2AQ9Y2K7 1162 aa31.17■■■□□ 2.58
APBB3-213ENST00000506958 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
APBB3-213ENST00000506958 YTHDC2Q9H6S0 1430 aaKnown RBP31.16■■■□□ 2.58
APBB3-213ENST00000506958 CFAP70Q5T0N1 1121 aa31.15■■■□□ 2.58
APBB3-213ENST00000506958 TMEM132EQ6IEE7 984 aa31.14■■■□□ 2.58
APBB3-213ENST00000506958 STK26Q9P289 416 aa31.14■■■□□ 2.58
APBB3-213ENST00000506958 SIRT1Q96EB6 747 aa31.09■■■□□ 2.57
APBB3-213ENST00000506958 MST1RQ04912 1400 aa31.08■■■□□ 2.57
APBB3-213ENST00000506958 ADGRB1O14514 1584 aa31.06■■■□□ 2.56
APBB3-213ENST00000506958 CDC42BPGQ6DT37 1551 aa31.05■■■□□ 2.56
APBB3-213ENST00000506958 PHLPP1O60346 1717 aa31.04■■■□□ 2.56
APBB3-213ENST00000506958 DLC1Q96QB1 1528 aa31.04■■■□□ 2.56
APBB3-213ENST00000506958 KIAA1210Q9ULL0 1709 aa31.02■■■□□ 2.56
APBB3-213ENST00000506958 AHDC1Q5TGY3 1603 aaPredicted RBP31.02■■■□□ 2.56
APBB3-213ENST00000506958 BRINP3Q76B58 766 aa31■■■□□ 2.55
APBB3-213ENST00000506958 WAPLQ7Z5K2 1190 aa31■■■□□ 2.55
APBB3-213ENST00000506958 C1orf167Q5SNV9 1468 aa30.98■■■□□ 2.55
APBB3-213ENST00000506958 SIN3AQ96ST3 1273 aa30.98■■■□□ 2.55
APBB3-213ENST00000506958 PLEKHH1Q9ULM0 1364 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms