RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 EID1Q9Y6B2 187 aa27.1■■□□□ 1.93
PDLIM7-216ENST00000506537 CERKQ8TCT0 537 aa27.09■■□□□ 1.93
PDLIM7-216ENST00000506537 ZNF335Q9H4Z2 1342 aaPredicted RBP27.09■■□□□ 1.93
PDLIM7-216ENST00000506537 KIF1BO60333 1816 aa27.08■■□□□ 1.93
PDLIM7-216ENST00000506537 NEXMIFQ5QGS0 1516 aa27■■□□□ 1.91
PDLIM7-216ENST00000506537 CCDC144AA2RUR9 1427 aa27■■□□□ 1.91
PDLIM7-216ENST00000506537 PLEKHG1Q9ULL1 1385 aa27■■□□□ 1.91
PDLIM7-216ENST00000506537 STRCP1A6NGW2 1772 aa26.99■■□□□ 1.91
PDLIM7-216ENST00000506537 NUTM2DQ5VT03 806 aaPredicted RBP26.99■■□□□ 1.91
PDLIM7-216ENST00000506537 TRIM26Q12899 539 aaPredicted RBP26.98■■□□□ 1.91
PDLIM7-216ENST00000506537 PPP1R15AO75807 674 aaPredicted RBP26.97■■□□□ 1.91
PDLIM7-216ENST00000506537 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.97■■□□□ 1.91
PDLIM7-216ENST00000506537 ZNF326Q5BKZ1 582 aaKnown RBP26.96■■□□□ 1.91
PDLIM7-216ENST00000506537 SENP3Q9H4L4 574 aaPredicted RBP26.96■■□□□ 1.91
PDLIM7-216ENST00000506537 HDGFP51858 240 aaKnown RBP26.95■■□□□ 1.9
PDLIM7-216ENST00000506537 SPATA31E1Q6ZUB1 1445 aa26.95■■□□□ 1.9
PDLIM7-216ENST00000506537 ANKRD30BQ9BXX2 1392 aa26.94■■□□□ 1.9
PDLIM7-216ENST00000506537 SLC26A8Q96RN1 970 aa26.93■■□□□ 1.9
PDLIM7-216ENST00000506537 CPS1P31327 1500 aa26.93■■□□□ 1.9
PDLIM7-216ENST00000506537 NRXN3Q9Y4C0 1643 aa26.93■■□□□ 1.9
PDLIM7-216ENST00000506537 ADAMTS13Q76LX8 1427 aa26.91■■□□□ 1.9
PDLIM7-216ENST00000506537 PPLO60437 1756 aa26.91■■□□□ 1.9
PDLIM7-216ENST00000506537 DISP3Q9P2K9 1392 aa26.9■■□□□ 1.9
PDLIM7-216ENST00000506537 SETBP1Q9Y6X0 1596 aa26.89■■□□□ 1.9
PDLIM7-216ENST00000506537 DIP2AQ14689 1571 aa26.88■■□□□ 1.89
PDLIM7-216ENST00000506537 IQSEC2Q5JU85 1478 aa26.88■■□□□ 1.89
PDLIM7-216ENST00000506537 BCANQ96GW7 911 aa26.88■■□□□ 1.89
PDLIM7-216ENST00000506537 NWD1Q149M9 1564 aa26.87■■□□□ 1.89
PDLIM7-216ENST00000506537 IFT172Q9UG01 1749 aa26.87■■□□□ 1.89
PDLIM7-216ENST00000506537 SOCS7O14512 581 aa26.85■■□□□ 1.89
PDLIM7-216ENST00000506537 ILDR2Q71H61 639 aa26.85■■□□□ 1.89
PDLIM7-216ENST00000506537 RPGRIP1LQ68CZ1 1315 aa26.85■■□□□ 1.89
PDLIM7-216ENST00000506537 LRRC7Q96NW7 1537 aa26.84■■□□□ 1.89
PDLIM7-216ENST00000506537 TBX22Q9Y458 520 aa26.83■■□□□ 1.89
PDLIM7-216ENST00000506537 CHD2O14647 1828 aaKnown RBP26.82■■□□□ 1.88
PDLIM7-216ENST00000506537 RGL3Q3MIN7 710 aa26.82■■□□□ 1.88
PDLIM7-216ENST00000506537 KCNA6P17658 529 aa26.79■■□□□ 1.88
PDLIM7-216ENST00000506537 SETD1AO15047 1707 aaKnown RBP26.79■■□□□ 1.88
PDLIM7-216ENST00000506537 XIRP1Q702N8 1843 aaKnown RBP26.78■■□□□ 1.88
PDLIM7-216ENST00000506537 NKTRP30414 1462 aaKnown RBP26.77■■□□□ 1.88
PDLIM7-216ENST00000506537 VGFO15240 615 aaPredicted RBP26.77■■□□□ 1.88
PDLIM7-216ENST00000506537 PTPRUQ92729 1446 aa26.75■■□□□ 1.87
PDLIM7-216ENST00000506537 PIK3R4Q99570 1358 aa26.75■■□□□ 1.87
PDLIM7-216ENST00000506537 METP08581 1390 aa26.74■■□□□ 1.87
PDLIM7-216ENST00000506537 ADGRF5Q8IZF2 1346 aa26.74■■□□□ 1.87
PDLIM7-216ENST00000506537 ALKQ9UM73 1620 aa26.73■■□□□ 1.87
PDLIM7-216ENST00000506537 XRN1Q8IZH2 1706 aaKnown RBP26.73■■□□□ 1.87
PDLIM7-216ENST00000506537 DHX57Q6P158 1386 aaKnown RBP26.72■■□□□ 1.87
PDLIM7-216ENST00000506537 MYOM2P54296 1465 aa26.7■■□□□ 1.87
PDLIM7-216ENST00000506537 TMEM94Q12767 1356 aa26.7■■□□□ 1.86
PDLIM7-216ENST00000506537 NRXN1Q9ULB1 1477 aa26.69■■□□□ 1.86
PDLIM7-216ENST00000506537 PIK3C2GO75747 1445 aa26.69■■□□□ 1.86
PDLIM7-216ENST00000506537 RBM33Q96EV2 1170 aaKnown RBP26.66■■□□□ 1.86
PDLIM7-216ENST00000506537 PROSER2Q86WR7 435 aaPredicted RBP26.65■■□□□ 1.86
PDLIM7-216ENST00000506537 AMOTL2Q9Y2J4 779 aa26.65■■□□□ 1.86
PDLIM7-216ENST00000506537 UBAP1LF5GYI3 381 aa26.64■■□□□ 1.86
PDLIM7-216ENST00000506537 ASXL1Q8IXJ9 1541 aa26.64■■□□□ 1.85
PDLIM7-216ENST00000506537 PCGF6Q9BYE7 350 aa26.6■■□□□ 1.85
PDLIM7-216ENST00000506537 PRAG1Q86YV5 1406 aa26.58■■□□□ 1.85
PDLIM7-216ENST00000506537 LAMC1P11047 1609 aa26.57■■□□□ 1.84
PDLIM7-216ENST00000506537 DCAF11Q8TEB1 546 aa26.57■■□□□ 1.84
PDLIM7-216ENST00000506537 SIN3AQ96ST3 1273 aa26.57■■□□□ 1.84
PDLIM7-216ENST00000506537 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
PDLIM7-216ENST00000506537 NCOA3Q9Y6Q9 1424 aa26.56■■□□□ 1.84
PDLIM7-216ENST00000506537 TOM1O60784 492 aa26.54■■□□□ 1.84
PDLIM7-216ENST00000506537 C14orf93Q9H972 538 aaKnown RBP26.54■■□□□ 1.84
PDLIM7-216ENST00000506537 KDM2AQ9Y2K7 1162 aa26.54■■□□□ 1.84
PDLIM7-216ENST00000506537 CFAP70Q5T0N1 1121 aa26.52■■□□□ 1.84
PDLIM7-216ENST00000506537 ROBO2Q9HCK4 1378 aa26.52■■□□□ 1.84
PDLIM7-216ENST00000506537 MSH6P52701 1360 aa26.51■■□□□ 1.83
PDLIM7-216ENST00000506537 TMEM132EQ6IEE7 984 aa26.51■■□□□ 1.83
PDLIM7-216ENST00000506537 KNDC1Q76NI1 1749 aa26.51■■□□□ 1.83
PDLIM7-216ENST00000506537 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.51■■□□□ 1.83
PDLIM7-216ENST00000506537 TECPR2O15040 1411 aa26.49■■□□□ 1.83
PDLIM7-216ENST00000506537 LRPPRCP42704 1394 aaKnown RBP26.49■■□□□ 1.83
PDLIM7-216ENST00000506537 NALCNQ8IZF0 1738 aa26.49■■□□□ 1.83
PDLIM7-216ENST00000506537 PIP4K2BP78356 416 aa26.49■■□□□ 1.83
PDLIM7-216ENST00000506537 ADGRB1O14514 1584 aa26.49■■□□□ 1.83
PDLIM7-216ENST00000506537 STAC3Q96MF2 364 aa26.48■■□□□ 1.83
PDLIM7-216ENST00000506537 YTHDC2Q9H6S0 1430 aaKnown RBP26.48■■□□□ 1.83
PDLIM7-216ENST00000506537 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
PDLIM7-216ENST00000506537 ADGRL3Q9HAR2 1447 aa26.46■■□□□ 1.83
PDLIM7-216ENST00000506537 SCAF1Q9H7N4 1312 aaKnown RBP26.45■■□□□ 1.83
PDLIM7-216ENST00000506537 C14orf37Q86TY3 774 aa26.45■■□□□ 1.82
PDLIM7-216ENST00000506537 ABCC11Q96J66 1382 aa26.45■■□□□ 1.82
PDLIM7-216ENST00000506537 L3MBTL2Q969R5 705 aa26.44■■□□□ 1.82
PDLIM7-216ENST00000506537 STK26Q9P289 416 aa26.44■■□□□ 1.82
PDLIM7-216ENST00000506537 C19orf44Q9H6X5 657 aa26.43■■□□□ 1.82
PDLIM7-216ENST00000506537 DCCP43146 1447 aa26.41■■□□□ 1.82
PDLIM7-216ENST00000506537 KIAA1210Q9ULL0 1709 aa26.39■■□□□ 1.82
PDLIM7-216ENST00000506537 ROBO1Q9Y6N7 1651 aa26.39■■□□□ 1.82
PDLIM7-216ENST00000506537 PLEKHH1Q9ULM0 1364 aa26.39■■□□□ 1.82
PDLIM7-216ENST00000506537 DLC1Q96QB1 1528 aa26.37■■□□□ 1.81
PDLIM7-216ENST00000506537 FAM135BQ49AJ0 1406 aa26.37■■□□□ 1.81
PDLIM7-216ENST00000506537 WAPLQ7Z5K2 1190 aa26.36■■□□□ 1.81
PDLIM7-216ENST00000506537 CADPS2Q86UW7 1296 aa26.36■■□□□ 1.81
PDLIM7-216ENST00000506537 SLAIN2Q9P270 581 aa26.36■■□□□ 1.81
PDLIM7-216ENST00000506537 ATF3P18847 181 aa26.35■■□□□ 1.81
PDLIM7-216ENST00000506537 MST1RQ04912 1400 aa26.34■■□□□ 1.81
PDLIM7-216ENST00000506537 HSPA1LP34931 641 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms