RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 ROCK1Q13464 1354 aa10.1□□□□□ -0.79
PROM1-206ENST00000505450 PRDM2Q13029 1718 aa10.1□□□□□ -0.79
PROM1-206ENST00000505450 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
PROM1-206ENST00000505450 ITPRIPQ8IWB1 547 aa10.1□□□□□ -0.79
PROM1-206ENST00000505450 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
PROM1-206ENST00000505450 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
PROM1-206ENST00000505450 U2AF1L5P0DN76 240 aaPredicted RBP10.09□□□□□ -0.79
PROM1-206ENST00000505450 U2AF1Q01081 240 aaKnown RBP eCLIP10.09□□□□□ -0.79
PROM1-206ENST00000505450 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
PROM1-206ENST00000505450 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
PROM1-206ENST00000505450 UGGT2Q9NYU1 1516 aa10.09□□□□□ -0.79
PROM1-206ENST00000505450 IGHDP01880 384 aa10.09□□□□□ -0.79
PROM1-206ENST00000505450 KDM6BO15054 1643 aa10.08□□□□□ -0.8
PROM1-206ENST00000505450 UBE2Q2Q8WVN8 375 aa10.08□□□□□ -0.8
PROM1-206ENST00000505450 PDZRN3Q9UPQ7 1066 aa10.08□□□□□ -0.8
PROM1-206ENST00000505450 LRPPRCP42704 1394 aaKnown RBP10.08□□□□□ -0.8
PROM1-206ENST00000505450 SLFN5Q08AF3 891 aa10.08□□□□□ -0.8
PROM1-206ENST00000505450 SEC24BO95487 1268 aa10.07□□□□□ -0.8
PROM1-206ENST00000505450 TEX14Q8IWB6 1497 aa10.07□□□□□ -0.8
PROM1-206ENST00000505450 POGZQ7Z3K3 1410 aa10.07□□□□□ -0.8
PROM1-206ENST00000505450 SMC4Q9NTJ3 1288 aa10.07□□□□□ -0.8
PROM1-206ENST00000505450 TRAK2O60296 914 aa10.06□□□□□ -0.8
PROM1-206ENST00000505450 PROSER2Q86WR7 435 aaPredicted RBP10.06□□□□□ -0.8
PROM1-206ENST00000505450 CHMP5Q9NZZ3 219 aa10.06□□□□□ -0.8
PROM1-206ENST00000505450 SCAPERQ9BY12 1400 aa10.06□□□□□ -0.8
PROM1-206ENST00000505450 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
PROM1-206ENST00000505450 PER1O15534 1290 aaPredicted RBP10.05□□□□□ -0.8
PROM1-206ENST00000505450 TXNDC2Q86VQ3 553 aa10.05□□□□□ -0.8
PROM1-206ENST00000505450 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
PROM1-206ENST00000505450 KDM5BQ9UGL1 1544 aa10.05□□□□□ -0.8
PROM1-206ENST00000505450 RBM33Q96EV2 1170 aaKnown RBP10.05□□□□□ -0.8
PROM1-206ENST00000505450 GBP4Q96PP9 640 aa10.04□□□□□ -0.8
PROM1-206ENST00000505450 DMRT2Q9Y5R5 561 aa10.04□□□□□ -0.8
PROM1-206ENST00000505450 HECW1Q76N89 1606 aa10.04□□□□□ -0.8
PROM1-206ENST00000505450 PANK2Q9BZ23 570 aa10.04□□□□□ -0.8
PROM1-206ENST00000505450 DISP3Q9P2K9 1392 aa10.04□□□□□ -0.8
PROM1-206ENST00000505450 ATF3P18847 181 aa10.04□□□□□ -0.8
PROM1-206ENST00000505450 MSNP26038 577 aaKnown RBP10.04□□□□□ -0.8
PROM1-206ENST00000505450 MCM4P33991 863 aa10.04□□□□□ -0.8
PROM1-206ENST00000505450 ARHGEF11O15085 1522 aa10.03□□□□□ -0.8
PROM1-206ENST00000505450 DENND4BO75064 1496 aaPredicted RBP10.03□□□□□ -0.8
PROM1-206ENST00000505450 SLC26A8Q96RN1 970 aa10.03□□□□□ -0.8
PROM1-206ENST00000505450 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
PROM1-206ENST00000505450 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
PROM1-206ENST00000505450 KIAA0586Q9BVV6 1533 aa10.03□□□□□ -0.8
PROM1-206ENST00000505450 PARD3Q8TEW0 1356 aa10.03□□□□□ -0.8
PROM1-206ENST00000505450 PLEKHH1Q9ULM0 1364 aa10.03□□□□□ -0.8
PROM1-206ENST00000505450 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
PROM1-206ENST00000505450 MAGI3Q5TCQ9 1506 aa10.03□□□□□ -0.8
PROM1-206ENST00000505450 RRAGDQ9NQL2 400 aaPredicted RBP10.03□□□□□ -0.8
PROM1-206ENST00000505450 ANKLE2Q86XL3 938 aa10.02□□□□□ -0.8
PROM1-206ENST00000505450 TRAK1Q9UPV9 953 aa10.02□□□□□ -0.8
PROM1-206ENST00000505450 C9orf84Q5VXU9 1444 aa10.02□□□□□ -0.81
PROM1-206ENST00000505450 ERBINQ96RT1 1412 aa10.02□□□□□ -0.81
PROM1-206ENST00000505450 APBB1O00213 710 aa10.02□□□□□ -0.81
PROM1-206ENST00000505450 PTMAP06454 111 aaKnown RBP10.02□□□□□ -0.81
PROM1-206ENST00000505450 THEMISQ8N1K5 641 aaPredicted RBP10.02□□□□□ -0.81
PROM1-206ENST00000505450 TCP11L2Q8N4U5 519 aa10.02□□□□□ -0.81
PROM1-206ENST00000505450 KDM2BQ8NHM5 1336 aa10.02□□□□□ -0.81
PROM1-206ENST00000505450 PKNOX2Q96KN3 472 aa10.02□□□□□ -0.81
PROM1-206ENST00000505450 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
PROM1-206ENST00000505450 TCOF1Q13428 1488 aaKnown RBP10.02□□□□□ -0.81
PROM1-206ENST00000505450 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
PROM1-206ENST00000505450 TROQ12816 1431 aaPredicted RBP10.01□□□□□ -0.81
PROM1-206ENST00000505450 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
PROM1-206ENST00000505450 MRE11P49959 708 aa10.01□□□□□ -0.81
PROM1-206ENST00000505450 CUL7Q14999 1698 aa10.01□□□□□ -0.81
PROM1-206ENST00000505450 DNTTIP2Q5QJE6 756 aaKnown RBP10.01□□□□□ -0.81
PROM1-206ENST00000505450 XRCC6P12956 609 aaKnown RBP eCLIP10.01□□□□□ -0.81
PROM1-206ENST00000505450 DZIP1LQ8IYY4 767 aaKnown RBP10□□□□□ -0.81
PROM1-206ENST00000505450 TNNQ9UQP3 1299 aa10□□□□□ -0.81
PROM1-206ENST00000505450 DDX49Q9Y6V7 483 aaKnown RBP10□□□□□ -0.81
PROM1-206ENST00000505450 PZPP20742 1482 aa10□□□□□ -0.81
PROM1-206ENST00000505450 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
PROM1-206ENST00000505450 ASXL2Q76L83 1435 aa10□□□□□ -0.81
PROM1-206ENST00000505450 CAMSAP2Q08AD1 1489 aa10□□□□□ -0.81
PROM1-206ENST00000505450 WDR62O43379 1518 aa10□□□□□ -0.81
PROM1-206ENST00000505450 ELL2O00472 640 aaPredicted RBP9.99□□□□□ -0.81
PROM1-206ENST00000505450 EIF3AQ14152 1382 aaKnown RBP9.99□□□□□ -0.81
PROM1-206ENST00000505450 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
PROM1-206ENST00000505450 FOXD4L4Q8WXT5 416 aaPredicted RBP9.99□□□□□ -0.81
PROM1-206ENST00000505450 CSB-PGBD3P0DP91 1061 aa9.99□□□□□ -0.81
PROM1-206ENST00000505450 CFAP70Q5T0N1 1121 aa9.99□□□□□ -0.81
PROM1-206ENST00000505450 RSPH4AQ5TD94 716 aa9.99□□□□□ -0.81
PROM1-206ENST00000505450 ANKRD45Q5TZF3 282 aa9.99□□□□□ -0.81
PROM1-206ENST00000505450 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
PROM1-206ENST00000505450 TESK2Q96S53 571 aa9.99□□□□□ -0.81
PROM1-206ENST00000505450 RALGAPBQ86X10 1494 aa9.98□□□□□ -0.81
PROM1-206ENST00000505450 TSR2Q969E8 191 aaKnown RBP9.98□□□□□ -0.81
PROM1-206ENST00000505450 GRPEL1Q9HAV7 217 aa9.98□□□□□ -0.81
PROM1-206ENST00000505450 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
PROM1-206ENST00000505450 ESPNB1AK53 854 aa9.98□□□□□ -0.81
PROM1-206ENST00000505450 RUNDC1Q96C34 613 aa9.98□□□□□ -0.81
PROM1-206ENST00000505450 MTHFSP49914 203 aa9.97□□□□□ -0.81
PROM1-206ENST00000505450 SRPK2P78362 688 aaKnown RBP9.97□□□□□ -0.81
PROM1-206ENST00000505450 PLCB2Q00722 1185 aa9.97□□□□□ -0.81
PROM1-206ENST00000505450 CTTNBP2Q8WZ74 1663 aa9.97□□□□□ -0.81
PROM1-206ENST00000505450 CALD1Q05682 793 aaKnown RBP9.97□□□□□ -0.81
PROM1-206ENST00000505450 FAM13BQ9NYF5 915 aa9.96□□□□□ -0.81
PROM1-206ENST00000505450 ARHGAP5Q13017 1502 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms