RNA–Protein interactions for RNA: ENST00000504858.5

NECAP2-209, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-209ENST00000504858 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
NECAP2-209ENST00000504858 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.07■■□□□ 1.6
NECAP2-209ENST00000504858 CLTCL1P53675 1640 aa25.06■■□□□ 1.6
NECAP2-209ENST00000504858 SLC4A1APQ9BWU0 796 aaKnown RBP25.06■■□□□ 1.6
NECAP2-209ENST00000504858 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
NECAP2-209ENST00000504858 KIF1BO60333 1816 aa25.01■■□□□ 1.59
NECAP2-209ENST00000504858 NWD1Q149M9 1564 aa25.01■■□□□ 1.59
NECAP2-209ENST00000504858 CHGAP10645 457 aaKnown RBP25■■□□□ 1.59
NECAP2-209ENST00000504858 DIP2AQ14689 1571 aa25■■□□□ 1.59
NECAP2-209ENST00000504858 PPP1R15AO75807 674 aaPredicted RBP24.97■■□□□ 1.59
NECAP2-209ENST00000504858 MPHOSPH9Q99550 1183 aa24.97■■□□□ 1.59
NECAP2-209ENST00000504858 TBX22Q9Y458 520 aa24.97■■□□□ 1.59
NECAP2-209ENST00000504858 NKTRP30414 1462 aaKnown RBP24.96■■□□□ 1.59
NECAP2-209ENST00000504858 RAB3GAP2Q9H2M9 1393 aa24.96■■□□□ 1.59
NECAP2-209ENST00000504858 KCNA6P17658 529 aa24.96■■□□□ 1.59
NECAP2-209ENST00000504858 HRCP23327 699 aa24.96■■□□□ 1.59
NECAP2-209ENST00000504858 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
NECAP2-209ENST00000504858 SLC26A8Q96RN1 970 aa24.95■■□□□ 1.58
NECAP2-209ENST00000504858 NEXMIFQ5QGS0 1516 aa24.95■■□□□ 1.58
NECAP2-209ENST00000504858 PIK3R4Q99570 1358 aa24.94■■□□□ 1.58
NECAP2-209ENST00000504858 SETBP1Q9Y6X0 1596 aa24.94■■□□□ 1.58
NECAP2-209ENST00000504858 CHD2O14647 1828 aaKnown RBP24.94■■□□□ 1.58
NECAP2-209ENST00000504858 XIRP1Q702N8 1843 aaKnown RBP24.93■■□□□ 1.58
NECAP2-209ENST00000504858 UBAP1LF5GYI3 381 aa24.92■■□□□ 1.58
NECAP2-209ENST00000504858 NRXN3Q9Y4C0 1643 aa24.9■■□□□ 1.58
NECAP2-209ENST00000504858 ALKQ9UM73 1620 aa24.9■■□□□ 1.58
NECAP2-209ENST00000504858 RPGRIP1LQ68CZ1 1315 aa24.89■■□□□ 1.58
NECAP2-209ENST00000504858 TOM1O60784 492 aa24.89■■□□□ 1.58
NECAP2-209ENST00000504858 CCDC144AA2RUR9 1427 aa24.88■■□□□ 1.57
NECAP2-209ENST00000504858 ZNF326Q5BKZ1 582 aaKnown RBP24.87■■□□□ 1.57
NECAP2-209ENST00000504858 BCANQ96GW7 911 aa24.87■■□□□ 1.57
NECAP2-209ENST00000504858 FOXD1Q16676 465 aa24.85■■□□□ 1.57
NECAP2-209ENST00000504858 NUTM2DQ5VT03 806 aaPredicted RBP24.85■■□□□ 1.57
NECAP2-209ENST00000504858 SPATA31E1Q6ZUB1 1445 aa24.85■■□□□ 1.57
NECAP2-209ENST00000504858 PPLO60437 1756 aa24.84■■□□□ 1.57
NECAP2-209ENST00000504858 NCOA3Q9Y6Q9 1424 aa24.84■■□□□ 1.57
NECAP2-209ENST00000504858 TMEM94Q12767 1356 aa24.83■■□□□ 1.57
NECAP2-209ENST00000504858 VGFO15240 615 aaPredicted RBP24.82■■□□□ 1.56
NECAP2-209ENST00000504858 XRN1Q8IZH2 1706 aaKnown RBP24.79■■□□□ 1.56
NECAP2-209ENST00000504858 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
NECAP2-209ENST00000504858 IFT172Q9UG01 1749 aa24.78■■□□□ 1.56
NECAP2-209ENST00000504858 SETD1AO15047 1707 aaKnown RBP24.77■■□□□ 1.56
NECAP2-209ENST00000504858 PTPRUQ92729 1446 aa24.77■■□□□ 1.56
NECAP2-209ENST00000504858 ANKRD30BQ9BXX2 1392 aa24.75■■□□□ 1.55
NECAP2-209ENST00000504858 PRAG1Q86YV5 1406 aa24.73■■□□□ 1.55
NECAP2-209ENST00000504858 METP08581 1390 aa24.73■■□□□ 1.55
NECAP2-209ENST00000504858 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
NECAP2-209ENST00000504858 AMOTL2Q9Y2J4 779 aa24.72■■□□□ 1.55
NECAP2-209ENST00000504858 MSH6P52701 1360 aa24.71■■□□□ 1.55
NECAP2-209ENST00000504858 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
NECAP2-209ENST00000504858 PIP4K2BP78356 416 aa24.69■■□□□ 1.54
NECAP2-209ENST00000504858 MYOM2P54296 1465 aa24.65■■□□□ 1.54
NECAP2-209ENST00000504858 NRXN1Q9ULB1 1477 aa24.65■■□□□ 1.54
NECAP2-209ENST00000504858 PIK3C2GO75747 1445 aa24.65■■□□□ 1.54
NECAP2-209ENST00000504858 DCCP43146 1447 aa24.65■■□□□ 1.54
NECAP2-209ENST00000504858 PTCH1Q13635 1447 aa24.65■■□□□ 1.54
NECAP2-209ENST00000504858 RGL3Q3MIN7 710 aa24.65■■□□□ 1.54
NECAP2-209ENST00000504858 SCAF1Q9H7N4 1312 aaKnown RBP24.64■■□□□ 1.54
NECAP2-209ENST00000504858 RBM33Q96EV2 1170 aaKnown RBP24.64■■□□□ 1.54
NECAP2-209ENST00000504858 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.64■■□□□ 1.53
NECAP2-209ENST00000504858 ADGRF5Q8IZF2 1346 aa24.63■■□□□ 1.53
NECAP2-209ENST00000504858 HSPA1LP34931 641 aa24.63■■□□□ 1.53
NECAP2-209ENST00000504858 C19orf44Q9H6X5 657 aa24.63■■□□□ 1.53
NECAP2-209ENST00000504858 ROBO1Q9Y6N7 1651 aa24.59■■□□□ 1.53
NECAP2-209ENST00000504858 CADPS2Q86UW7 1296 aa24.59■■□□□ 1.53
NECAP2-209ENST00000504858 STAC3Q96MF2 364 aa24.58■■□□□ 1.53
NECAP2-209ENST00000504858 SLAIN2Q9P270 581 aa24.58■■□□□ 1.53
NECAP2-209ENST00000504858 LAMC1P11047 1609 aa24.57■■□□□ 1.52
NECAP2-209ENST00000504858 TECPR2O15040 1411 aa24.57■■□□□ 1.52
NECAP2-209ENST00000504858 ADGRL3Q9HAR2 1447 aa24.57■■□□□ 1.52
NECAP2-209ENST00000504858 C14orf37Q86TY3 774 aa24.54■■□□□ 1.52
NECAP2-209ENST00000504858 KNDC1Q76NI1 1749 aa24.54■■□□□ 1.52
NECAP2-209ENST00000504858 NALCNQ8IZF0 1738 aa24.54■■□□□ 1.52
NECAP2-209ENST00000504858 ASXL1Q8IXJ9 1541 aa24.54■■□□□ 1.52
NECAP2-209ENST00000504858 ROBO2Q9HCK4 1378 aa24.54■■□□□ 1.52
NECAP2-209ENST00000504858 ATF3P18847 181 aa24.53■■□□□ 1.52
NECAP2-209ENST00000504858 C14orf93Q9H972 538 aaKnown RBP24.52■■□□□ 1.52
NECAP2-209ENST00000504858 LRPPRCP42704 1394 aaKnown RBP24.52■■□□□ 1.52
NECAP2-209ENST00000504858 ABCC11Q96J66 1382 aa24.52■■□□□ 1.52
NECAP2-209ENST00000504858 MST1RQ04912 1400 aa24.47■■□□□ 1.51
NECAP2-209ENST00000504858 YTHDC2Q9H6S0 1430 aaKnown RBP24.46■■□□□ 1.51
NECAP2-209ENST00000504858 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
NECAP2-209ENST00000504858 SIRT1Q96EB6 747 aa24.46■■□□□ 1.51
NECAP2-209ENST00000504858 AHDC1Q5TGY3 1603 aaPredicted RBP24.46■■□□□ 1.51
NECAP2-209ENST00000504858 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
NECAP2-209ENST00000504858 ADGRB1O14514 1584 aa24.42■■□□□ 1.5
NECAP2-209ENST00000504858 MED1Q15648 1581 aaPredicted RBP24.42■■□□□ 1.5
NECAP2-209ENST00000504858 CDC42BPGQ6DT37 1551 aa24.42■■□□□ 1.5
NECAP2-209ENST00000504858 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
NECAP2-209ENST00000504858 CFAP70Q5T0N1 1121 aa24.41■■□□□ 1.5
NECAP2-209ENST00000504858 TMEM132EQ6IEE7 984 aa24.41■■□□□ 1.5
NECAP2-209ENST00000504858 DCAF11Q8TEB1 546 aa24.41■■□□□ 1.5
NECAP2-209ENST00000504858 COL16A1Q07092 1604 aaPredicted RBP24.41■■□□□ 1.5
NECAP2-209ENST00000504858 DLC1Q96QB1 1528 aa24.4■■□□□ 1.5
NECAP2-209ENST00000504858 BRINP3Q76B58 766 aa24.4■■□□□ 1.5
NECAP2-209ENST00000504858 DISP3Q9P2K9 1392 aa24.4■■□□□ 1.5
NECAP2-209ENST00000504858 NHSL1Q5SYE7 1610 aa24.38■■□□□ 1.49
NECAP2-209ENST00000504858 C1orf167Q5SNV9 1468 aa24.38■■□□□ 1.49
NECAP2-209ENST00000504858 KIAA1210Q9ULL0 1709 aa24.35■■□□□ 1.49
NECAP2-209ENST00000504858 STK26Q9P289 416 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms