RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 RIMS2Q9UQ26 1411 aa30.67■■■□□ 2.5
PDGFRA-203ENST00000503856 HDGFP51858 240 aaKnown RBP30.62■■■□□ 2.49
PDGFRA-203ENST00000503856 HRCP23327 699 aa30.6■■■□□ 2.49
PDGFRA-203ENST00000503856 NUTM2DQ5VT03 806 aaPredicted RBP30.59■■■□□ 2.49
PDGFRA-203ENST00000503856 PPP1R15AO75807 674 aaPredicted RBP30.58■■■□□ 2.49
PDGFRA-203ENST00000503856 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.58■■■□□ 2.49
PDGFRA-203ENST00000503856 SENP3Q9H4L4 574 aaPredicted RBP30.58■■■□□ 2.49
PDGFRA-203ENST00000503856 STRCP1A6NGW2 1772 aa30.58■■■□□ 2.49
PDGFRA-203ENST00000503856 ZNF326Q5BKZ1 582 aaKnown RBP30.57■■■□□ 2.48
PDGFRA-203ENST00000503856 BCANQ96GW7 911 aa30.56■■■□□ 2.48
PDGFRA-203ENST00000503856 ILDR1Q86SU0 546 aaPredicted RBP30.55■■■□□ 2.48
PDGFRA-203ENST00000503856 SLC26A8Q96RN1 970 aa30.55■■■□□ 2.48
PDGFRA-203ENST00000503856 PLEKHG1Q9ULL1 1385 aa30.54■■■□□ 2.48
PDGFRA-203ENST00000503856 FBXO41Q8TF61 875 aa30.54■■■□□ 2.48
PDGFRA-203ENST00000503856 CPS1P31327 1500 aa30.52■■■□□ 2.48
PDGFRA-203ENST00000503856 CCDC144AA2RUR9 1427 aa30.51■■■□□ 2.47
PDGFRA-203ENST00000503856 NEXMIFQ5QGS0 1516 aa30.48■■■□□ 2.47
PDGFRA-203ENST00000503856 IQSEC2Q5JU85 1478 aa30.48■■■□□ 2.47
PDGFRA-203ENST00000503856 ADAMTS13Q76LX8 1427 aa30.42■■■□□ 2.46
PDGFRA-203ENST00000503856 PPLO60437 1756 aa30.42■■■□□ 2.46
PDGFRA-203ENST00000503856 TBX22Q9Y458 520 aa30.42■■■□□ 2.46
PDGFRA-203ENST00000503856 CHD2O14647 1828 aaKnown RBP30.42■■■□□ 2.46
PDGFRA-203ENST00000503856 KCNA6P17658 529 aa30.4■■■□□ 2.46
PDGFRA-203ENST00000503856 TRIM26Q12899 539 aaPredicted RBP30.4■■■□□ 2.46
PDGFRA-203ENST00000503856 NRXN3Q9Y4C0 1643 aa30.4■■■□□ 2.46
PDGFRA-203ENST00000503856 LRRC7Q96NW7 1537 aa30.39■■■□□ 2.46
PDGFRA-203ENST00000503856 RPGRIP1LQ68CZ1 1315 aa30.39■■■□□ 2.46
PDGFRA-203ENST00000503856 SPATA31E1Q6ZUB1 1445 aa30.39■■■□□ 2.45
PDGFRA-203ENST00000503856 DIP2AQ14689 1571 aa30.38■■■□□ 2.45
PDGFRA-203ENST00000503856 RGL3Q3MIN7 710 aa30.38■■■□□ 2.45
PDGFRA-203ENST00000503856 ANKRD30BQ9BXX2 1392 aa30.38■■■□□ 2.45
PDGFRA-203ENST00000503856 XIRP1Q702N8 1843 aaKnown RBP30.37■■■□□ 2.45
PDGFRA-203ENST00000503856 SETBP1Q9Y6X0 1596 aa30.37■■■□□ 2.45
PDGFRA-203ENST00000503856 VGFO15240 615 aaPredicted RBP30.35■■■□□ 2.45
PDGFRA-203ENST00000503856 NWD1Q149M9 1564 aa30.35■■■□□ 2.45
PDGFRA-203ENST00000503856 IFT172Q9UG01 1749 aa30.33■■■□□ 2.45
PDGFRA-203ENST00000503856 UBAP1LF5GYI3 381 aa30.3■■■□□ 2.44
PDGFRA-203ENST00000503856 PIK3R4Q99570 1358 aa30.28■■■□□ 2.44
PDGFRA-203ENST00000503856 NKTRP30414 1462 aaKnown RBP30.28■■■□□ 2.44
PDGFRA-203ENST00000503856 PROSER2Q86WR7 435 aaPredicted RBP30.28■■■□□ 2.44
PDGFRA-203ENST00000503856 SETD1AO15047 1707 aaKnown RBP30.25■■■□□ 2.43
PDGFRA-203ENST00000503856 PTPRUQ92729 1446 aa30.24■■■□□ 2.43
PDGFRA-203ENST00000503856 RBM33Q96EV2 1170 aaKnown RBP30.24■■■□□ 2.43
PDGFRA-203ENST00000503856 METP08581 1390 aa30.24■■■□□ 2.43
PDGFRA-203ENST00000503856 TMEM94Q12767 1356 aa30.24■■■□□ 2.43
PDGFRA-203ENST00000503856 ADGRF5Q8IZF2 1346 aa30.23■■■□□ 2.43
PDGFRA-203ENST00000503856 ALKQ9UM73 1620 aa30.22■■■□□ 2.43
PDGFRA-203ENST00000503856 AMOTL2Q9Y2J4 779 aa30.22■■■□□ 2.43
PDGFRA-203ENST00000503856 TOM1O60784 492 aa30.2■■■□□ 2.43
PDGFRA-203ENST00000503856 XRN1Q8IZH2 1706 aaKnown RBP30.19■■■□□ 2.42
PDGFRA-203ENST00000503856 PIP4K2BP78356 416 aa30.13■■■□□ 2.41
PDGFRA-203ENST00000503856 SCAF1Q9H7N4 1312 aaKnown RBP30.12■■■□□ 2.41
PDGFRA-203ENST00000503856 PIK3C2GO75747 1445 aa30.11■■■□□ 2.41
PDGFRA-203ENST00000503856 MYOM2P54296 1465 aa30.11■■■□□ 2.41
PDGFRA-203ENST00000503856 NRXN1Q9ULB1 1477 aa30.09■■■□□ 2.41
PDGFRA-203ENST00000503856 NCOA3Q9Y6Q9 1424 aa30.08■■■□□ 2.41
PDGFRA-203ENST00000503856 DHX57Q6P158 1386 aaKnown RBP30.08■■■□□ 2.41
PDGFRA-203ENST00000503856 MSH6P52701 1360 aa30.07■■■□□ 2.4
PDGFRA-203ENST00000503856 DCAF11Q8TEB1 546 aa30.07■■■□□ 2.4
PDGFRA-203ENST00000503856 KDM2AQ9Y2K7 1162 aa30.07■■■□□ 2.4
PDGFRA-203ENST00000503856 C14orf37Q86TY3 774 aa30.06■■■□□ 2.4
PDGFRA-203ENST00000503856 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.04■■■□□ 2.4
PDGFRA-203ENST00000503856 C14orf93Q9H972 538 aaKnown RBP30.03■■■□□ 2.4
PDGFRA-203ENST00000503856 TMEM132EQ6IEE7 984 aa30.02■■■□□ 2.4
PDGFRA-203ENST00000503856 ASXL1Q8IXJ9 1541 aa30.01■■■□□ 2.4
PDGFRA-203ENST00000503856 LAMC1P11047 1609 aa30.01■■■□□ 2.39
PDGFRA-203ENST00000503856 CFAP70Q5T0N1 1121 aa30.01■■■□□ 2.39
PDGFRA-203ENST00000503856 SIN3AQ96ST3 1273 aa30■■■□□ 2.39
PDGFRA-203ENST00000503856 C19orf44Q9H6X5 657 aa30■■■□□ 2.39
PDGFRA-203ENST00000503856 STAC3Q96MF2 364 aa29.99■■■□□ 2.39
PDGFRA-203ENST00000503856 ROBO2Q9HCK4 1378 aa29.99■■■□□ 2.39
PDGFRA-203ENST00000503856 PTCH1Q13635 1447 aa29.98■■■□□ 2.39
PDGFRA-203ENST00000503856 PRAG1Q86YV5 1406 aa29.97■■■□□ 2.39
PDGFRA-203ENST00000503856 STK26Q9P289 416 aa29.97■■■□□ 2.39
PDGFRA-203ENST00000503856 NALCNQ8IZF0 1738 aa29.96■■■□□ 2.39
PDGFRA-203ENST00000503856 LRPPRCP42704 1394 aaKnown RBP29.95■■■□□ 2.39
PDGFRA-203ENST00000503856 PCGF6Q9BYE7 350 aa29.95■■■□□ 2.39
PDGFRA-203ENST00000503856 KNDC1Q76NI1 1749 aa29.93■■■□□ 2.38
PDGFRA-203ENST00000503856 ATF3P18847 181 aa29.93■■■□□ 2.38
PDGFRA-203ENST00000503856 HSPA1LP34931 641 aa29.93■■■□□ 2.38
PDGFRA-203ENST00000503856 NEUROD1Q13562 356 aa29.93■■■□□ 2.38
PDGFRA-203ENST00000503856 SLAIN2Q9P270 581 aa29.93■■■□□ 2.38
PDGFRA-203ENST00000503856 YTHDC2Q9H6S0 1430 aaKnown RBP29.93■■■□□ 2.38
PDGFRA-203ENST00000503856 CADPS2Q86UW7 1296 aa29.92■■■□□ 2.38
PDGFRA-203ENST00000503856 ROBO1Q9Y6N7 1651 aa29.91■■■□□ 2.38
PDGFRA-203ENST00000503856 ABCC11Q96J66 1382 aa29.91■■■□□ 2.38
PDGFRA-203ENST00000503856 FAM135BQ49AJ0 1406 aa29.91■■■□□ 2.38
PDGFRA-203ENST00000503856 ADGRL3Q9HAR2 1447 aa29.91■■■□□ 2.38
PDGFRA-203ENST00000503856 TECPR2O15040 1411 aa29.9■■■□□ 2.38
PDGFRA-203ENST00000503856 DCCP43146 1447 aa29.88■■■□□ 2.37
PDGFRA-203ENST00000503856 WAPLQ7Z5K2 1190 aa29.87■■■□□ 2.37
PDGFRA-203ENST00000503856 ADGRB1O14514 1584 aa29.86■■■□□ 2.37
PDGFRA-203ENST00000503856 L3MBTL2Q969R5 705 aa29.86■■■□□ 2.37
PDGFRA-203ENST00000503856 PLEKHH1Q9ULM0 1364 aa29.82■■■□□ 2.36
PDGFRA-203ENST00000503856 KIAA1210Q9ULL0 1709 aa29.81■■■□□ 2.36
PDGFRA-203ENST00000503856 SIRT1Q96EB6 747 aa29.8■■■□□ 2.36
PDGFRA-203ENST00000503856 MST1RQ04912 1400 aa29.79■■■□□ 2.36
PDGFRA-203ENST00000503856 TRAK1Q9UPV9 953 aa29.77■■■□□ 2.36
PDGFRA-203ENST00000503856 DLC1Q96QB1 1528 aa29.76■■■□□ 2.35
PDGFRA-203ENST00000503856 PHLPP1O60346 1717 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms