RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 LTBP4Q8N2S1 1624 aa26.98■■□□□ 1.91
PDLIM7-209ENST00000503346 CERKQ8TCT0 537 aa26.96■■□□□ 1.91
PDLIM7-209ENST00000503346 MYO5BQ9ULV0 1848 aa26.95■■□□□ 1.91
PDLIM7-209ENST00000503346 PLEKHG1Q9ULL1 1385 aa26.94■■□□□ 1.9
PDLIM7-209ENST00000503346 CCDC144AA2RUR9 1427 aa26.93■■□□□ 1.9
PDLIM7-209ENST00000503346 PPP1R15AO75807 674 aaPredicted RBP26.93■■□□□ 1.9
PDLIM7-209ENST00000503346 TRIM26Q12899 539 aaPredicted RBP26.93■■□□□ 1.9
PDLIM7-209ENST00000503346 ZNF326Q5BKZ1 582 aaKnown RBP26.91■■□□□ 1.9
PDLIM7-209ENST00000503346 NUTM2DQ5VT03 806 aaPredicted RBP26.87■■□□□ 1.89
PDLIM7-209ENST00000503346 KIF1BO60333 1816 aa26.86■■□□□ 1.89
PDLIM7-209ENST00000503346 SLC26A8Q96RN1 970 aa26.86■■□□□ 1.89
PDLIM7-209ENST00000503346 CPS1P31327 1500 aa26.85■■□□□ 1.89
PDLIM7-209ENST00000503346 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
PDLIM7-209ENST00000503346 ANKRD30BQ9BXX2 1392 aa26.84■■□□□ 1.89
PDLIM7-209ENST00000503346 BCANQ96GW7 911 aa26.84■■□□□ 1.89
PDLIM7-209ENST00000503346 RPGRIP1LQ68CZ1 1315 aa26.84■■□□□ 1.89
PDLIM7-209ENST00000503346 SPATA31E1Q6ZUB1 1445 aa26.83■■□□□ 1.89
PDLIM7-209ENST00000503346 IQSEC2Q5JU85 1478 aa26.83■■□□□ 1.89
PDLIM7-209ENST00000503346 TBX22Q9Y458 520 aa26.82■■□□□ 1.88
PDLIM7-209ENST00000503346 ADAMTS13Q76LX8 1427 aa26.81■■□□□ 1.88
PDLIM7-209ENST00000503346 FBXO41Q8TF61 875 aa26.79■■□□□ 1.88
PDLIM7-209ENST00000503346 SENP3Q9H4L4 574 aaPredicted RBP26.78■■□□□ 1.88
PDLIM7-209ENST00000503346 VGFO15240 615 aaPredicted RBP26.77■■□□□ 1.88
PDLIM7-209ENST00000503346 KCNA6P17658 529 aa26.77■■□□□ 1.88
PDLIM7-209ENST00000503346 DIP2AQ14689 1571 aa26.76■■□□□ 1.87
PDLIM7-209ENST00000503346 SETBP1Q9Y6X0 1596 aa26.76■■□□□ 1.87
PDLIM7-209ENST00000503346 RGL3Q3MIN7 710 aa26.74■■□□□ 1.87
PDLIM7-209ENST00000503346 STRCP1A6NGW2 1772 aa26.74■■□□□ 1.87
PDLIM7-209ENST00000503346 PIK3R4Q99570 1358 aa26.73■■□□□ 1.87
PDLIM7-209ENST00000503346 LRRC7Q96NW7 1537 aa26.72■■□□□ 1.87
PDLIM7-209ENST00000503346 ILDR1Q86SU0 546 aaPredicted RBP26.72■■□□□ 1.87
PDLIM7-209ENST00000503346 NRXN3Q9Y4C0 1643 aa26.72■■□□□ 1.87
PDLIM7-209ENST00000503346 NWD1Q149M9 1564 aa26.71■■□□□ 1.87
PDLIM7-209ENST00000503346 PPLO60437 1756 aa26.69■■□□□ 1.86
PDLIM7-209ENST00000503346 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
PDLIM7-209ENST00000503346 ADGRF5Q8IZF2 1346 aa26.65■■□□□ 1.86
PDLIM7-209ENST00000503346 METP08581 1390 aa26.64■■□□□ 1.86
PDLIM7-209ENST00000503346 PTPRUQ92729 1446 aa26.63■■□□□ 1.85
PDLIM7-209ENST00000503346 IFT172Q9UG01 1749 aa26.62■■□□□ 1.85
PDLIM7-209ENST00000503346 CHD2O14647 1828 aaKnown RBP26.62■■□□□ 1.85
PDLIM7-209ENST00000503346 TMEM94Q12767 1356 aa26.61■■□□□ 1.85
PDLIM7-209ENST00000503346 DHX57Q6P158 1386 aaKnown RBP26.61■■□□□ 1.85
PDLIM7-209ENST00000503346 PROSER2Q86WR7 435 aaPredicted RBP26.61■■□□□ 1.85
PDLIM7-209ENST00000503346 AMOTL2Q9Y2J4 779 aa26.6■■□□□ 1.85
PDLIM7-209ENST00000503346 ALKQ9UM73 1620 aa26.6■■□□□ 1.85
PDLIM7-209ENST00000503346 MYOM2P54296 1465 aa26.6■■□□□ 1.85
PDLIM7-209ENST00000503346 UBAP1LF5GYI3 381 aa26.59■■□□□ 1.85
PDLIM7-209ENST00000503346 PIK3C2GO75747 1445 aa26.58■■□□□ 1.85
PDLIM7-209ENST00000503346 NRXN1Q9ULB1 1477 aa26.58■■□□□ 1.85
PDLIM7-209ENST00000503346 TOM1O60784 492 aa26.55■■□□□ 1.84
PDLIM7-209ENST00000503346 STAC3Q96MF2 364 aa26.55■■□□□ 1.84
PDLIM7-209ENST00000503346 SETD1AO15047 1707 aaKnown RBP26.55■■□□□ 1.84
PDLIM7-209ENST00000503346 NCOA3Q9Y6Q9 1424 aa26.55■■□□□ 1.84
PDLIM7-209ENST00000503346 RBM33Q96EV2 1170 aaKnown RBP26.54■■□□□ 1.84
PDLIM7-209ENST00000503346 XRN1Q8IZH2 1706 aaKnown RBP26.53■■□□□ 1.84
PDLIM7-209ENST00000503346 XIRP1Q702N8 1843 aaKnown RBP26.51■■□□□ 1.83
PDLIM7-209ENST00000503346 DCAF11Q8TEB1 546 aa26.51■■□□□ 1.83
PDLIM7-209ENST00000503346 PRAG1Q86YV5 1406 aa26.5■■□□□ 1.83
PDLIM7-209ENST00000503346 C14orf93Q9H972 538 aaKnown RBP26.5■■□□□ 1.83
PDLIM7-209ENST00000503346 PCGF6Q9BYE7 350 aa26.49■■□□□ 1.83
PDLIM7-209ENST00000503346 KDM2AQ9Y2K7 1162 aa26.47■■□□□ 1.83
PDLIM7-209ENST00000503346 PTCH1Q13635 1447 aa26.47■■□□□ 1.83
PDLIM7-209ENST00000503346 MSH6P52701 1360 aa26.46■■□□□ 1.83
PDLIM7-209ENST00000503346 SIN3AQ96ST3 1273 aa26.46■■□□□ 1.83
PDLIM7-209ENST00000503346 CFAP70Q5T0N1 1121 aa26.45■■□□□ 1.82
PDLIM7-209ENST00000503346 ASXL1Q8IXJ9 1541 aa26.44■■□□□ 1.82
PDLIM7-209ENST00000503346 LRPPRCP42704 1394 aaKnown RBP26.43■■□□□ 1.82
PDLIM7-209ENST00000503346 PIP4K2BP78356 416 aa26.42■■□□□ 1.82
PDLIM7-209ENST00000503346 TMEM132EQ6IEE7 984 aa26.42■■□□□ 1.82
PDLIM7-209ENST00000503346 C19orf44Q9H6X5 657 aa26.42■■□□□ 1.82
PDLIM7-209ENST00000503346 ROBO2Q9HCK4 1378 aa26.42■■□□□ 1.82
PDLIM7-209ENST00000503346 LAMC1P11047 1609 aa26.41■■□□□ 1.82
PDLIM7-209ENST00000503346 C14orf37Q86TY3 774 aa26.41■■□□□ 1.82
PDLIM7-209ENST00000503346 TECPR2O15040 1411 aa26.4■■□□□ 1.82
PDLIM7-209ENST00000503346 ABCC11Q96J66 1382 aa26.4■■□□□ 1.82
PDLIM7-209ENST00000503346 NEUROD1Q13562 356 aa26.39■■□□□ 1.82
PDLIM7-209ENST00000503346 YTHDC2Q9H6S0 1430 aaKnown RBP26.39■■□□□ 1.81
PDLIM7-209ENST00000503346 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
PDLIM7-209ENST00000503346 L3MBTL2Q969R5 705 aa26.37■■□□□ 1.81
PDLIM7-209ENST00000503346 CADPS2Q86UW7 1296 aa26.36■■□□□ 1.81
PDLIM7-209ENST00000503346 STK26Q9P289 416 aa26.36■■□□□ 1.81
PDLIM7-209ENST00000503346 DCCP43146 1447 aa26.36■■□□□ 1.81
PDLIM7-209ENST00000503346 ADGRL3Q9HAR2 1447 aa26.36■■□□□ 1.81
PDLIM7-209ENST00000503346 ADGRB1O14514 1584 aa26.34■■□□□ 1.81
PDLIM7-209ENST00000503346 SIRT1Q96EB6 747 aa26.34■■□□□ 1.81
PDLIM7-209ENST00000503346 FAM135BQ49AJ0 1406 aa26.33■■□□□ 1.81
PDLIM7-209ENST00000503346 ATF3P18847 181 aa26.33■■□□□ 1.81
PDLIM7-209ENST00000503346 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.32■■□□□ 1.8
PDLIM7-209ENST00000503346 SLAIN2Q9P270 581 aa26.32■■□□□ 1.8
PDLIM7-209ENST00000503346 KNDC1Q76NI1 1749 aa26.31■■□□□ 1.8
PDLIM7-209ENST00000503346 WAPLQ7Z5K2 1190 aa26.28■■□□□ 1.8
PDLIM7-209ENST00000503346 NALCNQ8IZF0 1738 aa26.26■■□□□ 1.79
PDLIM7-209ENST00000503346 DLC1Q96QB1 1528 aa26.26■■□□□ 1.79
PDLIM7-209ENST00000503346 PLEKHH1Q9ULM0 1364 aa26.26■■□□□ 1.79
PDLIM7-209ENST00000503346 HSPA1LP34931 641 aa26.26■■□□□ 1.79
PDLIM7-209ENST00000503346 MST1RQ04912 1400 aa26.23■■□□□ 1.79
PDLIM7-209ENST00000503346 KIAA1210Q9ULL0 1709 aa26.23■■□□□ 1.79
PDLIM7-209ENST00000503346 TONSLQ96HA7 1378 aa26.22■■□□□ 1.79
PDLIM7-209ENST00000503346 TRAK1Q9UPV9 953 aa26.22■■□□□ 1.79
PDLIM7-209ENST00000503346 CLSPNQ9HAW4 1339 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms